5UHP	Hydrolase	date	Jan 11, 2017
title	Crystal Structure Of The Core Catalytic Domain Of Human O-Gl
authors	D.J.Klein, N.L.Elsen
compound		source
Molecule: O-Glcnacase Tim-Barrel Domain Chain: A, B, C, D Synonym: Oga,Beta-N-Acetylglucosaminidase,Beta-N- Acetylhexosaminidase,Beta-Hexosaminidase,Meningioma-Express 5,N-Acetyl-Beta-D-Glucosaminidase,N-Acetyl-Beta-Glucosamini Nuclear Cytoplasmic O-Glcnacase And Acetyltransferase,Ncoat Ec: 3.2.1.169,3.2.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mgea5, Hexc, Kiaa0679, Mea5 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
Molecule: O-Glcnacase Stalk Domain Chain: E, F, G, H Synonym: Oga,Beta-N-Acetylglucosaminidase,Beta-N- Acetylhexosaminidase,Beta-Hexosaminidase,Meningioma-Express 5,N-Acetyl-Beta-D-Glucosaminidase,N-Acetyl-Beta-Glucosamini Nuclear Cytoplasmic O-Glcnacase And Acetyltransferase,Ncoat Ec: 3.2.1.169,3.2.1.- Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Mgea5, Hexc, Kiaa0679, Mea5 Expression_system: Spodoptera Frugiperda Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: P 1	R_factor 0.239 R_Free 0.292
crystal cell	length a length b length c angle alpha angle beta angle gamma 89.722 91.531 94.517 77.27 62.81 63.03
method	X-Ray Diffraction	resolution	2.79 Å
ligand	GOL	enzyme	Hydrolase E.C.3.2.1.169 BRENDA

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (281 Kb) [Save to disk] Biological Unit Coordinates (5uhp.pdb1.gz) 138 Kb Biological Unit Coordinates (5uhp.pdb2.gz) 138 Kb LPC: Ligand-Protein Contacts for 5UHP CSU: Contacts of Structural Units for 5UHP Structure Factors (2036 Kb) Retrieve 5UHP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5UHP from S2C, [Save to disk] Re-refined 5uhp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5UHP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5UHP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5uhp_F] [5uhp] [5uhp_E] [5uhp_C] [5uhp_H] [5uhp_D] [5uhp_G] [5uhp_A] [5uhp_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5UHP

Community annotation for 5UHP at PDBWiki (http://pdbwiki.org)

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