5UYS Oxidoreductase date Feb 24, 2017
title Human Steroidogenic Cytochrome P450 17a1 With 3alphaoh-5alph Abiraterone Analog
authors E.E.Scott, E.M.Petrunak
compound source
Molecule: Steroid 17-Alpha-Hydroxylase17,20 Lyase
Chain: A, B, C, D
Fragment: Residues 24-508
Synonym: 17-Alpha-Hydroxyprogesterone Aldolase,Cypxvii,Cyto P450 17a1,Cytochrome P450-C17,Cytochrome P450c17,Steroid 17 Monooxygenase;
Ec: 1.14.14.19,1.14.14.32
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp17a1, Cyp17, S17ah
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcwori17a1delta19h
symmetry Space Group: P 21 21 21
R_factor 0.190 R_Free 0.245
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.759 153.180 168.885 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.39 Å
ligand 8QD, HEM enzyme Oxidoreductase E.C.1.14.14.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (606 Kb) [Save to disk]
  • Biological Unit Coordinates (5uys.pdb1.gz) 152 Kb
  • Biological Unit Coordinates (5uys.pdb2.gz) 152 Kb
  • Biological Unit Coordinates (5uys.pdb3.gz) 153 Kb
  • Biological Unit Coordinates (5uys.pdb4.gz) 153 Kb
  • LPC: Ligand-Protein Contacts for 5UYS
  • CSU: Contacts of Structural Units for 5UYS
  • Structure Factors (992 Kb)
  • Retrieve 5UYS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5UYS from S2C, [Save to disk]
  • View 5UYS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5UYS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5uys_C] [5uys_B] [5uys_A] [5uys_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5UYS
  • Community annotation for 5UYS at PDBWiki (http://pdbwiki.org)

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