5WEK Transport Protein date Jul 10, 2017
title Glua2 Bound To Antagonist Zk And Gsg1l In Digitonin, State 1
authors E.C.Twomey, M.V.Yelshanskaya, R.A.Grassucci, J.Frank, A.I.Sobole
compound source
Molecule: Chimera Of Glutamate Receptor 2,Germ Cell-Specifi Like Protein;
Chain: A, B, C, D
Fragment: Unp P19491 Residues 25-847, Unp D3z7h4 Residues 2 Linked Via Linker Gtg;
Synonym: Glur-2,Ampa-Selective Glutamate Receptor 2,Glur-B, Glutamate Receptor Ionotropic,Ampa 2,Glua2,Gsg1-Like Protei
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus, Mus Musculus
Organism_common: Rat, Mouse
Organism_taxid: 10116, 10090
Gene: Gria2, Glur2, Gsg1l
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
Expression_system_cell_line: Hek293 Gnti-
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.60 Å
ligand ZK1 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • ion channel activity
  • extracellularly glutamate-ga...
  • ligand-gated ion channel act...
  • transmitter-gated ion channe...


  • Primary referenceChannel opening and gating mechanism in AMPA-subtype glutamate receptors., Twomey EC, Yelshanskaya MV, Grassucci RA, Frank J, Sobolevsky AI, Nature. 2017 Jul 24. doi: 10.1038/nature23479. PMID:28737760
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (508 Kb) [Save to disk]
  • Biological Unit Coordinates (5wek.pdb1.gz) 498 Kb
  • LPC: Ligand-Protein Contacts for 5WEK
  • CSU: Contacts of Structural Units for 5WEK
  • Retrieve 5WEK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WEK from S2C, [Save to disk]
  • View 5WEK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WEK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wek_D] [5wek_A] [5wek_B] [5wek_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WEK
  • Community annotation for 5WEK at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science