5WUD Membrane Protein date Dec 17, 2016
title Structural Basis For Conductance Through Tric Cation Channel
authors M.Su, F.Gao, Y.Mao, D.L.Li, Y.Z.Guo, X.H.Wang, R.Bruni, B.Kloss, W.A.Hendrickson, Y.H.Chen, New York Consortium On Membrane Pr Structure (Nycomps)
compound source
Molecule: Uncharacterized Protein
Chain: A
Synonym: Prokaryotic Satric
Engineered: Yes
 Organism_scientific: Sulfolobus Acidocaldarius
Organism_taxid: 2285
Gene: Aty89_00310, Atz20_03355
Expression_system: Escherichia Coli
Expression_system_taxid: 866768
Expression_system_strain: 'Bl21-Gold(De3)Plyss Ag'
symmetry Space Group: P 63
R_factor 0.187 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.613 64.613 80.955 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (5wud.pdb1.gz) 181 Kb
  • LPC: Ligand-Protein Contacts for 5WUD
  • CSU: Contacts of Structural Units for 5WUD
  • Structure Factors (435 Kb)
  • Retrieve 5WUD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WUD from S2C, [Save to disk]
  • Re-refined 5wud structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5WUD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5WUD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wud_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5WUD
  • Community annotation for 5WUD at PDBWiki (http://pdbwiki.org)

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