6B34 Antimicrobial Protein date Sep 20, 2017
title Nmr Ensemble Of Tyrocidine A Analogue Ac3.27
authors A.J.Cameron, P.J.B.Ewdards, E.Harjes, V.Sarojini
compound source
Molecule: Tyrocidine A Analogue D-Phe-Be2-Phe-D-Phe-Asn-Gln Orn-Leu;
Chain: A
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Brevibacillus Brevis
Organism_taxid: 1393
Other_details: Synthetic Analogue Of Tyrocidine A. Sequence Altered At 2 Positions Relative To Natural Product.
methodSolution NMR
ligand BE2, DPN, ORN enzyme
Primary referenceTyrocidine A Analogues Bearing the Planar d-Phe-2-Abz Turn Motif: How Conformation Impacts Bioactivity., Cameron AJ, Edwards PJB, Harjes E, Sarojini V, J Med Chem. 2017 Nov 28. doi: 10.1021/acs.jmedchem.7b00953. PMID:29140694
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (23 Kb) [Save to disk]
  • Biological Unit Coordinates (6b34.pdb1.gz) 3 Kb
  • LPC: Ligand-Protein Contacts for 6B34
  • CSU: Contacts of Structural Units for 6B34
  • Original NMR restraints for 6B34 from PDB
  • Retrieve 6B34 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B34 from S2C, [Save to disk]
    • View 6B34 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6B34
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b34_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6B34
  • Community annotation for 6B34 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science