6BCL Transport Protein date Oct 20, 2017
title Cryo-Em Structure Of Trpm4 In Apo State With Long Coiled Coi Angstrom Resolution
authors J.Guo, J.She, Q.Chen, X.Bai, Y.Jiang
compound source
Molecule: Transient Receptor Potential Cation Channel Subfa Member 4;
Chain: B, A, C, D
Synonym: Calcium-Activated Non-Selective Cation Channel 1,L Transient Receptor Potential Channel 4,Ltrpc4;
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: Mouse
Organism_taxid: 10090
Gene: Trpm4, Ltrpc4
Expression_system: Homo Sapiens
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.54 Å
ligand NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructures of the calcium-activated, non-selective cation channel TRPM4., Guo J, She J, Zeng W, Chen Q, Bai XC, Jiang Y, Nature. 2017 Dec 14;552(7684):205-209. doi: 10.1038/nature24997. Epub 2017 Dec 6. PMID:29211714
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (556 Kb) [Save to disk]
  • Biological Unit Coordinates (6bcl.pdb1.gz) 547 Kb
  • LPC: Ligand-Protein Contacts for 6BCL
  • CSU: Contacts of Structural Units for 6BCL
  • Retrieve 6BCL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BCL from S2C, [Save to disk]
  • View 6BCL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BCL
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bcl_D] [6bcl_C] [6bcl_A] [6bcl_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BCL
  • Community annotation for 6BCL at PDBWiki (http://pdbwiki.org)

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