6C26 Transferase date Jan 06, 2018
title The Cryo-Em Structure Of A Eukaryotic Oligosaccharyl Transfe Complex
authors L.Bai, H.Li
compound source
Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Stt3;
Chain: A
Synonym: Oligosaccharyl Transferase Subunit Stt3
Ec: 2.4.99.18
 Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit 1;
Chain: 1
Synonym: Oligosaccharyl Transferase 64 Kda Subunit,Oligosac Transferase Subunit Ost1,Oligosaccharyl Transferase Subunit
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Ost5;
Chain: 5
Synonym: Oligosaccharyl Transferase Subunit Ost5,Oligosacch Transferase 9.5 Kda Subunit,Oligosaccharyl Transferase Subu
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Ost4;
Chain: 4
Synonym: Oligosaccharyl Transferase Subunit Ost4,Oligosacch Transferase 4 Kda Subunit,Otase 4 Kda Subunit;
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Ost2;
Chain: 2
Synonym: Oligosaccharyl Transferase Subunit Ost2,Oligosacch Transferase 16 Kda Subunit,Oligosaccharyl Transferase Subun Epsilon;
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit 3;
Chain: 3
Synonym: Oligosaccharyl Transferase 34 Kda Subunit,Oligosac Transferase Subunit Ost3,Oligosaccharyl Transferase Subunit
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Swp1;
Chain: C
Synonym: Oligosaccharyl Transferase Subunit Swp1,Oligosacch Transferase Subunit Delta;
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Dolichyl-Diphosphooligosaccharide--Protein Glycosyltransferase Subunit Wbp1;
Chain: B
Synonym: Oligosaccharyl Transferase Subunit Wbp1,Oligosacch Transferase Subunit Beta;
Ec: 2.4.99.18
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.50 Å
ligand BMA, EGY, NAG enzyme Transferase E.C.2.4.99.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
1


2


4


5


A

  • oligosaccharyltransferase co...
    • B


    C


    Primary referenceThe atomic structure of a eukaryotic oligosaccharyltransferase complex., Bai L, Wang T, Zhao G, Kovach A, Li H, Nature. 2018 Jan 22. pii: nature25755. doi: 10.1038/nature25755. PMID:29466327
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (317 Kb) [Save to disk]
  • Biological Unit Coordinates (6c26.pdb1.gz) 307 Kb
  • LPC: Ligand-Protein Contacts for 6C26
  • CSU: Contacts of Structural Units for 6C26
  • Retrieve 6C26 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6C26 from S2C, [Save to disk]
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    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6c26_B] [6c26_4] [6c26_1] [6c26_3] [6c26_5] [6c26_A] [6c26_C] [6c26_2]
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  • Domain organization of by SWISSPFAM
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  • Community annotation for 6C26 at PDBWiki (http://pdbwiki.org)

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