6CPA Hydrolase (C-Terminal Peptidase) date Feb 15, 1990
title Crystal Structure Of The Complex Of Carboxypeptidase A With A Strongly Bound Phosphonate In A New Crystalline Form: Comparison With Structures Of Other Complexes
authors H.Kim, W.N.Lipscomb
compound source
Molecule: Carboxypeptidase A
Chain: A
Ec: 3.4.17.1
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor 0.193 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.900 67.200 76.200 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand ZAF, ZN enzyme Hydrolase E.C.3.4.17.1 BRENDA
related structures by homologous chain: 1CPS, 7CPA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the complex of carboxypeptidase A with a strongly bound phosphonate in a new crystalline form: comparison with structures of other complexes., Kim H, Lipscomb WN, Biochemistry 1990 Jun 12;29(23):5546-55. PMID:2386784
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk]
  • Biological Unit Coordinates (6cpa.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 6CPA
  • CSU: Contacts of Structural Units for 6CPA
  • Likely Quarternary Molecular Structure file(s) for 6CPA
  • Retrieve 6CPA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CPA from S2C, [Save to disk]
    • View 6CPA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6CPA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 6CPA, from MSDmotif at EBI
  • Genome occurence of 6CPA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d6cpa__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6cpa] [6cpa_A]
  • SWISS-PROT database: [P00730]
  • Domain organization of [CBPA1_BOVIN] by SWISSPFAM
  • Domain found in 6CPA: [Zn_pept ] by SMART
    • Other resources with information on 6CPA
  • Community annotation for 6CPA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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