6FKI Membrane Protein date Jan 24, 2018
title Chloroplast F1fo Conformation 3
authors A.Hahn, J.Vonck, D.J.Mills, T.Meier, W.Kuehlbrandt
compound source
Molecule: Atp Synthase Subunit A, Chloroplastic
Chain: a
Synonym: Atp Synthase F0 Sector Subunit A,F-Atpase Subunit
 Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Subunit B, Chloroplastic
Chain: b
Synonym: Atp Synthase F(0) Sector Subunit B,Atpase Subunit
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Delta Chain, Chloroplastic
Chain: d
Synonym: F-Atpase Delta Chain
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Subunit B', Chloroplastic
Chain: p
Synonym: Atp Synthase F(0) Sector Subunit B',Atpase Subunit
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Epsilon Chain, Chloroplastic
Chain: e
Synonym: Atp Synthase F1 Sector Epsilon Subunit,F-Atpase Ep Subunit;
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Gamma Chain, Chloroplastic
Chain: g
Synonym: F-Atpase Gamma Subunit
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Subunit C, Chloroplastic
Chain: S, N, O, P, Q, R, M, T, G, H, L, K, J, I
Synonym: Atp Synthase F(0) Sector Subunit C,Atpase Subunit Atpase Subunit C,F-Atpase Subunit C,Lipid-Binding Protein;
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Subunit Alpha, Chloroplastic
Chain: E, A, C
Synonym: Atp Synthase F1 Sector Subunit Alpha,F-Atpase Subu
Ec: 3.6.3.14
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562

Molecule: Atp Synthase Subunit Beta, Chloroplastic
Chain: F, B, D
Synonym: Atp Synthase F1 Sector Subunit Beta,F-Atpase Subun
Ec: 3.6.3.14
Organism_scientific: Spinacia Oleracea
Organism_common: Spinach
Organism_taxid: 3562
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.30 Å
ligand ADP, ATP, MG enzyme Hydrolase E.C.3.6.3.14 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
E, C, A


F, B, D


S, T, N, K, Q, M, L, J, O, P, H, R, I, G


a


b


d


e


g


p


Primary referenceStructure, mechanism, and regulation of the chloroplast ATP synthase., Hahn A, Vonck J, Mills DJ, Meier T, Kuhlbrandt W, Science. 2018 May 11;360(6389). pii: 360/6389/eaat4318. doi:, 10.1126/science.aat4318. PMID:29748256
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (734 Kb) [Save to disk]
  • Biological Unit Coordinates (6fki.pdb1.gz) 724 Kb
  • LPC: Ligand-Protein Contacts for 6FKI
  • CSU: Contacts of Structural Units for 6FKI
  • Retrieve 6FKI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6FKI from S2C, [Save to disk]
    • View 6FKI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6FKI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6fki_T] [6fki_O] [6fki_J] [6fki_A] [6fki_R] [6fki_N] [6fki_S] [6fki_B] [6fki_K] [6fki_E] [6fki_a] [6fki_D] [6fki_G] [6fki_b] [6fki_C] [6fki_H] [6fki_Q] [6fki_p] [6fki_d] [6fki_e] [6fki_M] [6fki_P] [6fki_g] [6fki_I] [6fki_L] [6fki_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6FKI
  • Community annotation for 6FKI at PDBWiki (http://pdbwiki.org)

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