6TIM	Isomerase(Intramolecular Oxidoreductase)	date	Apr 23, 1991
title	The Adaptability Of The Active Site Of Trypanosomal Trioseph Isomerase As Observed In The Crystal Structures Of Three Di Complexes
authors	M.E.M.Noble, R.K.Wierenga, W.G.J.Hol
compound		source
Molecule: Triosephosphate Isomerase Chain: A, B Ec: 5.3.1.1 Engineered: Yes		Organism_scientific: Trypanosoma Brucei Brucei Organism_taxid: 5702 Strain: Brucei
symmetry	Space Group: P 21 21 21	R_factor R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 112.360 97.590 46.650 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	G3P	enzyme	Isomerase E.C.5.3.1.1 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	The adaptability of the active site of trypanosomal triosephosphate isomerase as observed in the crystal structures of three different complexes., Noble ME, Wierenga RK, Lambeir AM, Opperdoes FR, Thunnissen AM, Kalk KH, Groendijk H, Hol WG, Proteins 1991;10(1):50-69. PMID:2062828

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (82 Kb) [Save to disk] Biological Unit Coordinates (6tim.pdb1.gz) 78 Kb LPC: Ligand-Protein Contacts for 6TIM CSU: Contacts of Structural Units for 6TIM Likely Quarternary Molecular Structure file(s) for 6TIM Retrieve 6TIM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6TIM from S2C, [Save to disk]

View 6TIM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6TIM

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 6TIM, from MSDmotif at EBI Genome occurence of 6TIM's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d6tima_, region A [Jmol] [rasmolscript] [script source]     - Domain d6timb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6tim] [6tim_B] [6tim_A] SWISS-PROT database: [P04789] Domain organization of [TPIS_TRYBB] by SWISSPFAM

Other resources with information on 6TIM

Community annotation for 6TIM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 6TIM from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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