7STD SCYTALONE DEHYDRATASE PLUS INHIBITOR 4 date
authors Wawrzak, Z., Sandalova, T., Steffens, J.J., Basarab, G.S., Lundqvist, T., Lindqvist, Y., Jordan, D.B.
compound source
symmetry
R_factor
R_Free 0.2290000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand CA, CRP BindingDB enzyme
related structures by homologous chain: 5STD, 6STD
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceHigh-resolution structures of scytalone dehydratase-inhibitor complexes crystallized at physiological pH., Wawrzak Z, Sandalova T, Steffens JJ, Basarab GS, Lundqvist T, Lindqvist Y, Jordan DB, Proteins 1999 Jun 1;35(4):425-39. PMID:10382670
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk]
  • Biological Unit Coordinates (7std.pdb1.gz) 88 Kb
  • Biological Unit Coordinates (7std.pdb2.gz) 176 Kb
  • LPC: Ligand-Protein Contacts for 7STD
  • CSU: Contacts of Structural Units for 7STD
  • Likely Quarternary Molecular Structure file(s) for 7STD
  • Retrieve 7STD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7STD from S2C, [Save to disk]
    • View 7STD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7STD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 7STD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d7stda_, region A [Jmol] [rasmolscript] [script source]
        - Domain d7stdb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d7stdc_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7std_C] [7std] [7std_A] [7std_B]
  • SWISS-PROT database: [P56221]
  • Domain organization of [SCYD_MAGGR] by SWISSPFAM
    • Other resources with information on 7STD
  • Community annotation for 7STD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science