data_1FN1 # _entry.id 1FN1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.313 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1FN1 NDB DD0032 RCSB RCSB011728 WWPDB D_1000011728 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type NDB DD0033 '9-amino-(N-(2-dimethylamino)butyl)acridine-4-carboxamide bound to d(CGTACG)2' unspecified NDB DD0023 '5-F-9-amino-(N-(2-dimethylamino)ethyl-acridine-4-carboxamide bound to d(CGTACG)2' unspecified NDB DD0015 '9-amino-(N-(2-dimethylamino)ethyl)acridine-4-carboxamide bound to d(CGTACG)2' unspecified NDB DDB074 '6-Br-9-amino-(N-(2-dimethylamino)ethyl)acridine-4-carboxamide bound to d(CG(Br)ACG)2' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1FN1 _pdbx_database_status.recvd_initial_deposition_date 2000-08-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Adams, A.' 1 'Guss, J.M.' 2 'Collyer, C.A.' 3 'Denny, W.A.' 4 'Wakelin, L.P.G.' 5 # _citation.id primary _citation.title 'A novel form of intercalation involving four DNA duplexes in an acridine-4-carboxamide complex of d(CGTACG)(2).' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 28 _citation.page_first 4244 _citation.page_last 4253 _citation.year 2000 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 11058124 _citation.pdbx_database_id_DOI 10.1093/nar/28.21.4244 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Adams, A.' 1 ? primary 'Guss, J.M.' 2 ? primary 'Collyer, C.A.' 3 ? primary 'Denny, W.A.' 4 ? primary 'Wakelin, L.P.' 5 ? # _cell.entry_id 1FN1 _cell.length_a 28.880 _cell.length_b 53.168 _cell.length_c 40.416 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1FN1 _symmetry.space_group_name_H-M 'C 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 21 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*GP*(BRO)UP*AP*CP*G)-3') ; 1584.906 1 ? ? ? 'KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION' 2 polymer syn ;DNA (5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3') ; 1874.087 1 ? ? ? 'KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION' 3 non-polymer syn 'COBALT (II) ION' 58.933 2 ? ? ? ? 4 non-polymer syn '9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE' 336.431 1 ? ? ? ? 5 water nat water 18.015 19 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(BRU)(DA)(DC)(DG)' GUACG A ? 2 polydeoxyribonucleotide no yes '(DC)(DG)(BRU)(DA)(DC)(DG)' CGUACG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 BRU n 1 3 DA n 1 4 DC n 1 5 DG n 2 1 DC n 2 2 DG n 2 3 BRU n 2 4 DA n 2 5 DC n 2 6 DG n # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1FN1 1FN1 ? ? ? 2 2 PDB 1FN1 1FN1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1FN1 A 1 ? 5 ? 1FN1 1002 ? 1006 ? 1002 1006 2 2 1FN1 B 1 ? 6 ? 1FN1 2001 ? 2006 ? 2001 2006 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8AD non-polymer . '9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE' ? 'C20 H24 N4 O' 336.431 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 # _exptl.entry_id 1FN1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 43.0 _exptl_crystal.density_Matthews 2.16 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 285 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'MPD, sodium cacodylate, magnesium acetate, cobalt(II) chloride, spermine, pH 6.5, VAPOR DIFFUSION, temperature 285K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'sodium cacodylate' ? ? ? 1 2 1 'magnesium acetate' ? ? ? 1 3 1 CoCl2 ? ? ? 1 4 1 spermine ? ? ? 1 5 1 MPD ? ? ? 1 6 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 1' _diffrn_detector.pdbx_collection_date 1999-04-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8920 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_wavelength 0.8920 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1FN1 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 40.0 _reflns.d_resolution_high 1.60 _reflns.number_obs 4345 _reflns.number_all 4345 _reflns.percent_possible_obs 98.1 _reflns.pdbx_Rmerge_I_obs 0.029 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 37.0 _reflns.B_iso_Wilson_estimate 20.3 _reflns.pdbx_redundancy 5.0 _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.66 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs 0.075 _reflns_shell.meanI_over_sigI_obs 9.1 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 1.9 _reflns_shell.number_unique_all 739 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1FN1 _refine.ls_number_reflns_obs 7785 _refine.ls_number_reflns_all 7785 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 40.0 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.23 _refine.ls_R_factor_all 0.23 _refine.ls_R_factor_R_work 0.23 _refine.ls_R_factor_R_free 0.24 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.8 _refine.ls_number_reflns_R_free 608 _refine.ls_number_parameters 1123 _refine.ls_number_restraints 2727 _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Shelx 2000' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1FN1 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen 0 _refine_analyze.occupancy_sum_non_hydrogen 251.75 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 222 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 19 _refine_hist.number_atoms_total 275 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 40.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_angle_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ? s_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.038 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0145 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.010 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.075 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1FN1 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.218 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff 0.238 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 7.9 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 568 _pdbx_refine.number_reflns_obs_4sig_cutoff 7161 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1FN1 _struct.title 'CRYSTAL STRUCTURE OF 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CG(5BR)UACG)2' _struct.pdbx_descriptor ;5'-D(P*GP*(BRO)UP*AP*CP*GC)-3', 5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3', ACRIDINE DERIVATIVE ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1FN1 _struct_keywords.pdbx_keywords DNA _struct_keywords.text '9-aminoacridine-4-carboamide, hexanucleotide, intercalation, quadruplex, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 3 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A DG 1 N7 ? ? ? 1_555 C CO . CO ? ? A DG 1002 A CO 4002 1_555 ? ? ? ? ? ? ? 2.096 ? metalc2 metalc ? ? B DG 6 N7 ? ? ? 1_555 E CO . CO ? ? B DG 2006 B CO 4001 1_555 ? ? ? ? ? ? ? 2.195 ? metalc3 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 4001 B HOH 4007 1_555 ? ? ? ? ? ? ? 2.261 ? metalc4 metalc ? ? E CO . CO ? ? ? 1_555 G HOH . O ? ? B CO 4001 B HOH 4009 1_555 ? ? ? ? ? ? ? 1.809 ? covale1 covale both ? A DG 1 "O3'" ? ? ? 1_555 A BRU 2 P ? ? A DG 1002 A BRU 1003 1_555 ? ? ? ? ? ? ? 1.688 ? covale2 covale both ? A BRU 2 "O3'" ? ? ? 1_555 A DA 3 P ? ? A BRU 1003 A DA 1004 1_555 ? ? ? ? ? ? ? 1.643 ? covale3 covale both ? B DG 2 "O3'" ? ? ? 1_555 B BRU 3 P ? ? B DG 2002 B BRU 2003 1_555 ? ? ? ? ? ? ? 1.663 ? covale4 covale both ? B BRU 3 "O3'" ? ? ? 1_555 B DA 4 P ? ? B BRU 2003 B DA 2004 1_555 ? ? ? ? ? ? ? 1.690 ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 1002 B DC 2005 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 1002 B DC 2005 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 1002 B DC 2005 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? A BRU 2 N3 ? ? ? 1_555 B DA 4 N1 ? ? A BRU 1003 B DA 2004 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? A BRU 2 O4 ? ? ? 1_555 B DA 4 N6 ? ? A BRU 1003 B DA 2004 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B BRU 3 N3 ? ? A DA 1004 B BRU 2003 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B BRU 3 O4 ? ? A DA 1004 B BRU 2003 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 1005 B DG 2002 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 1005 B DG 2002 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 1005 B DG 2002 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CO B 4001' AC2 Software ? ? ? ? 1 'BINDING SITE FOR RESIDUE CO A 4002' AC3 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE 8AD A 3014' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 DG B 6 ? DG B 2006 . ? 1_555 ? 2 AC1 6 DG B 6 ? DG B 2006 . ? 3_756 ? 3 AC1 6 HOH G . ? HOH B 4007 . ? 1_555 ? 4 AC1 6 HOH G . ? HOH B 4007 . ? 3_756 ? 5 AC1 6 HOH G . ? HOH B 4009 . ? 3_756 ? 6 AC1 6 HOH G . ? HOH B 4009 . ? 1_555 ? 7 AC2 1 DG A 1 ? DG A 1002 . ? 1_555 ? 8 AC3 5 DC A 4 ? DC A 1005 . ? 1_555 ? 9 AC3 5 DG A 5 ? DG A 1006 . ? 1_555 ? 10 AC3 5 DC B 1 ? DC B 2001 . ? 3_655 ? 11 AC3 5 DG B 2 ? DG B 2002 . ? 2_665 ? 12 AC3 5 DG B 2 ? DG B 2002 . ? 1_555 ? # _database_PDB_matrix.entry_id 1FN1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _atom_sites.entry_id 1FN1 _atom_sites.fract_transf_matrix[1][1] 0.034626 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018808 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024743 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol BR C CO N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 P P . DG A 1 1 ? 15.610 8.186 5.104 1.00 69.52 ? 1002 DG A P 1 ATOM 2 O OP1 . DG A 1 1 ? 16.986 7.938 5.202 1.00 70.93 ? 1002 DG A OP1 1 ATOM 3 O OP2 . DG A 1 1 ? 15.029 9.282 4.439 1.00 54.57 ? 1002 DG A OP2 1 ATOM 4 O "O5'" . DG A 1 1 ? 15.068 8.297 6.633 1.00 52.86 ? 1002 DG A "O5'" 1 ATOM 5 C "C5'" . DG A 1 1 ? 15.062 7.120 7.491 1.00 37.45 ? 1002 DG A "C5'" 1 ATOM 6 C "C4'" . DG A 1 1 ? 14.920 7.768 8.920 1.00 35.02 ? 1002 DG A "C4'" 1 ATOM 7 O "O4'" . DG A 1 1 ? 16.004 8.714 9.258 1.00 36.83 ? 1002 DG A "O4'" 1 ATOM 8 C "C3'" . DG A 1 1 ? 13.555 8.501 9.194 1.00 31.04 ? 1002 DG A "C3'" 1 ATOM 9 O "O3'" . DG A 1 1 ? 13.151 8.118 10.407 1.00 36.56 ? 1002 DG A "O3'" 1 ATOM 10 C "C2'" . DG A 1 1 ? 13.966 9.944 9.066 1.00 31.25 ? 1002 DG A "C2'" 1 ATOM 11 C "C1'" . DG A 1 1 ? 15.394 10.026 9.616 1.00 29.95 ? 1002 DG A "C1'" 1 ATOM 12 N N9 . DG A 1 1 ? 16.452 10.912 9.115 1.00 27.52 ? 1002 DG A N9 1 ATOM 13 C C8 . DG A 1 1 ? 16.817 11.049 7.778 1.00 23.19 ? 1002 DG A C8 1 ATOM 14 N N7 . DG A 1 1 ? 17.787 11.899 7.595 1.00 33.91 ? 1002 DG A N7 1 ATOM 15 C C5 . DG A 1 1 ? 18.095 12.361 8.871 1.00 31.06 ? 1002 DG A C5 1 ATOM 16 C C6 . DG A 1 1 ? 19.071 13.300 9.266 1.00 19.85 ? 1002 DG A C6 1 ATOM 17 O O6 . DG A 1 1 ? 19.890 13.945 8.604 1.00 28.61 ? 1002 DG A O6 1 ATOM 18 N N1 . DG A 1 1 ? 19.068 13.500 10.665 1.00 21.90 ? 1002 DG A N1 1 ATOM 19 C C2 . DG A 1 1 ? 18.213 12.844 11.486 1.00 21.61 ? 1002 DG A C2 1 ATOM 20 N N2 . DG A 1 1 ? 18.306 13.118 12.801 1.00 24.33 ? 1002 DG A N2 1 ATOM 21 N N3 . DG A 1 1 ? 17.306 11.973 11.118 1.00 26.16 ? 1002 DG A N3 1 ATOM 22 C C4 . DG A 1 1 ? 17.281 11.759 9.803 1.00 25.47 ? 1002 DG A C4 1 HETATM 23 N N1 . BRU A 1 2 ? 14.370 13.975 11.203 1.00 26.57 ? 1003 BRU A N1 1 HETATM 24 C C2 . BRU A 1 2 ? 15.427 14.844 11.439 1.00 26.84 ? 1003 BRU A C2 1 HETATM 25 N N3 . BRU A 1 2 ? 16.095 15.308 10.365 1.00 22.47 ? 1003 BRU A N3 1 HETATM 26 C C4 . BRU A 1 2 ? 15.847 14.995 9.041 1.00 22.03 ? 1003 BRU A C4 1 HETATM 27 C C5 . BRU A 1 2 ? 14.750 14.103 8.871 1.00 27.75 ? 1003 BRU A C5 1 HETATM 28 C C6 . BRU A 1 2 ? 14.047 13.614 9.908 1.00 33.22 ? 1003 BRU A C6 1 HETATM 29 O O2 . BRU A 1 2 ? 15.767 15.206 12.560 1.00 24.92 ? 1003 BRU A O2 1 HETATM 30 O O4 . BRU A 1 2 ? 16.559 15.509 8.168 1.00 28.47 ? 1003 BRU A O4 1 HETATM 31 BR BR . BRU A 1 2 ? 14.271 13.583 7.123 1.00 36.17 ? 1003 BRU A BR 1 HETATM 32 C "C1'" . BRU A 1 2 ? 13.656 13.483 12.331 1.00 32.44 ? 1003 BRU A "C1'" 1 HETATM 33 C "C2'" . BRU A 1 2 ? 12.139 13.586 12.438 1.00 26.66 ? 1003 BRU A "C2'" 1 HETATM 34 C "C3'" . BRU A 1 2 ? 11.693 12.361 13.212 1.00 31.23 ? 1003 BRU A "C3'" 1 HETATM 35 C "C4'" . BRU A 1 2 ? 12.950 11.404 13.149 1.00 32.16 ? 1003 BRU A "C4'" 1 HETATM 36 O "O3'" . BRU A 1 2 ? 11.475 12.512 14.517 1.00 33.75 ? 1003 BRU A "O3'" 1 HETATM 37 O "O4'" . BRU A 1 2 ? 13.924 12.015 12.223 1.00 26.59 ? 1003 BRU A "O4'" 1 HETATM 38 C "C5'" . BRU A 1 2 ? 12.649 9.895 12.824 1.00 25.15 ? 1003 BRU A "C5'" 1 HETATM 39 O "O5'" . BRU A 1 2 ? 11.870 10.035 11.569 1.00 34.93 ? 1003 BRU A "O5'" 1 HETATM 40 P P . BRU A 1 2 ? 11.595 8.632 10.810 1.00 42.87 ? 1003 BRU A P 1 HETATM 41 O OP1 . BRU A 1 2 ? 11.178 7.755 11.804 1.00 43.95 ? 1003 BRU A OP1 1 HETATM 42 O OP2 . BRU A 1 2 ? 11.013 8.936 9.578 1.00 55.28 ? 1003 BRU A OP2 1 ATOM 43 P P . DA A 1 3 ? 10.492 13.594 15.267 1.00 41.00 ? 1004 DA A P 1 ATOM 44 O OP1 . DA A 1 3 ? 10.492 13.160 16.606 1.00 45.46 ? 1004 DA A OP1 1 ATOM 45 O OP2 . DA A 1 3 ? 9.409 13.779 14.406 1.00 47.42 ? 1004 DA A OP2 1 ATOM 46 O "O5'" . DA A 1 3 ? 11.284 15.012 15.234 1.00 30.37 ? 1004 DA A "O5'" 1 ATOM 47 C "C5'" . DA A 1 3 ? 12.394 14.960 16.194 1.00 28.22 ? 1004 DA A "C5'" 1 ATOM 48 C "C4'" . DA A 1 3 ? 12.902 16.448 16.214 1.00 26.19 ? 1004 DA A "C4'" 1 ATOM 49 O "O4'" . DA A 1 3 ? 13.701 16.729 15.006 1.00 28.93 ? 1004 DA A "O4'" 1 ATOM 50 C "C3'" . DA A 1 3 ? 11.808 17.577 16.393 1.00 20.50 ? 1004 DA A "C3'" 1 ATOM 51 O "O3'" . DA A 1 3 ? 12.198 18.309 17.420 1.00 31.40 ? 1004 DA A "O3'" 1 ATOM 52 C "C2'" . DA A 1 3 ? 11.855 18.252 15.038 1.00 24.78 ? 1004 DA A "C2'" 1 ATOM 53 C "C1'" . DA A 1 3 ? 13.274 18.034 14.490 1.00 35.14 ? 1004 DA A "C1'" 1 ATOM 54 N N9 . DA A 1 3 ? 13.533 17.918 13.044 1.00 26.16 ? 1004 DA A N9 1 ATOM 55 C C8 . DA A 1 3 ? 12.844 17.208 12.110 1.00 32.46 ? 1004 DA A C8 1 ATOM 56 N N7 . DA A 1 3 ? 13.341 17.315 10.897 1.00 31.17 ? 1004 DA A N7 1 ATOM 57 C C5 . DA A 1 3 ? 14.420 18.148 11.061 1.00 22.68 ? 1004 DA A C5 1 ATOM 58 C C6 . DA A 1 3 ? 15.350 18.638 10.119 1.00 23.86 ? 1004 DA A C6 1 ATOM 59 N N6 . DA A 1 3 ? 15.266 18.296 8.818 1.00 33.02 ? 1004 DA A N6 1 ATOM 60 N N1 . DA A 1 3 ? 16.309 19.440 10.563 1.00 27.09 ? 1004 DA A N1 1 ATOM 61 C C2 . DA A 1 3 ? 16.343 19.746 11.871 1.00 28.14 ? 1004 DA A C2 1 ATOM 62 N N3 . DA A 1 3 ? 15.527 19.350 12.852 1.00 24.64 ? 1004 DA A N3 1 ATOM 63 C C4 . DA A 1 3 ? 14.563 18.536 12.373 1.00 28.26 ? 1004 DA A C4 1 ATOM 64 P P . DC A 1 4 ? 11.159 19.544 17.856 1.00 39.87 ? 1005 DC A P 1 ATOM 65 O OP1 . DC A 1 4 ? 11.549 19.881 19.166 1.00 45.73 ? 1005 DC A OP1 1 ATOM 66 O OP2 . DC A 1 4 ? 9.920 19.159 17.362 1.00 31.14 ? 1005 DC A OP2 1 ATOM 67 O "O5'" . DC A 1 4 ? 11.655 20.800 16.976 1.00 28.19 ? 1005 DC A "O5'" 1 ATOM 68 C "C5'" . DC A 1 4 ? 13.028 21.192 17.280 1.00 27.99 ? 1005 DC A "C5'" 1 ATOM 69 C "C4'" . DC A 1 4 ? 13.236 22.165 16.046 1.00 31.75 ? 1005 DC A "C4'" 1 ATOM 70 O "O4'" . DC A 1 4 ? 13.418 21.410 14.800 1.00 28.52 ? 1005 DC A "O4'" 1 ATOM 71 C "C3'" . DC A 1 4 ? 12.126 23.242 15.796 1.00 31.22 ? 1005 DC A "C3'" 1 ATOM 72 O "O3'" . DC A 1 4 ? 12.565 24.345 16.351 1.00 29.69 ? 1005 DC A "O3'" 1 ATOM 73 C "C2'" . DC A 1 4 ? 12.069 23.316 14.289 1.00 42.83 ? 1005 DC A "C2'" 1 ATOM 74 C "C1'" . DC A 1 4 ? 13.185 22.428 13.745 1.00 30.68 ? 1005 DC A "C1'" 1 ATOM 75 N N1 . DC A 1 4 ? 12.884 21.769 12.517 1.00 27.10 ? 1005 DC A N1 1 ATOM 76 C C2 . DC A 1 4 ? 13.677 22.011 11.400 1.00 29.24 ? 1005 DC A C2 1 ATOM 77 O O2 . DC A 1 4 ? 14.616 22.798 11.534 1.00 26.66 ? 1005 DC A O2 1 ATOM 78 N N3 . DC A 1 4 ? 13.383 21.384 10.254 1.00 32.34 ? 1005 DC A N3 1 ATOM 79 C C4 . DC A 1 4 ? 12.362 20.553 10.170 1.00 26.61 ? 1005 DC A C4 1 ATOM 80 N N4 . DC A 1 4 ? 12.123 19.959 8.998 1.00 30.81 ? 1005 DC A N4 1 ATOM 81 C C5 . DC A 1 4 ? 11.515 20.266 11.293 1.00 28.55 ? 1005 DC A C5 1 ATOM 82 C C6 . DC A 1 4 ? 11.818 20.890 12.425 1.00 25.85 ? 1005 DC A C6 1 ATOM 83 P P . DG A 1 5 ? 11.652 25.692 16.714 1.00 38.09 ? 1006 DG A P 1 ATOM 84 O OP1 . DG A 1 5 ? 12.336 26.404 17.684 1.00 47.47 ? 1006 DG A OP1 1 ATOM 85 O OP2 . DG A 1 5 ? 10.321 25.237 16.746 1.00 40.54 ? 1006 DG A OP2 1 ATOM 86 O "O5'" . DG A 1 5 ? 11.726 26.568 15.327 1.00 32.42 ? 1006 DG A "O5'" 1 ATOM 87 C "C5'" . DG A 1 5 ? 12.962 27.352 15.178 1.00 36.23 ? 1006 DG A "C5'" 1 ATOM 88 C "C4'" . DG A 1 5 ? 12.516 28.565 14.270 1.00 27.89 ? 1006 DG A "C4'" 1 ATOM 89 O "O4'" . DG A 1 5 ? 11.915 28.132 12.988 1.00 33.06 ? 1006 DG A "O4'" 1 ATOM 90 C "C3'" . DG A 1 5 ? 11.522 29.610 14.904 1.00 35.96 ? 1006 DG A "C3'" 1 ATOM 91 O "O3'" . DG A 1 5 ? 12.207 30.490 15.629 1.00 35.98 ? 1006 DG A "O3'" 1 ATOM 92 C "C2'" . DG A 1 5 ? 10.909 30.214 13.665 1.00 27.71 ? 1006 DG A "C2'" 1 ATOM 93 C "C1'" . DG A 1 5 ? 10.856 29.105 12.610 1.00 26.37 ? 1006 DG A "C1'" 1 ATOM 94 N N9 . DG A 1 5 ? 9.685 28.230 12.439 1.00 26.56 ? 1006 DG A N9 1 ATOM 95 C C8 . DG A 1 5 ? 8.707 27.884 13.327 1.00 30.15 ? 1006 DG A C8 1 ATOM 96 N N7 . DG A 1 5 ? 7.787 27.072 12.861 1.00 29.44 ? 1006 DG A N7 1 ATOM 97 C C5 . DG A 1 5 ? 8.194 26.864 11.550 1.00 26.89 ? 1006 DG A C5 1 ATOM 98 C C6 . DG A 1 5 ? 7.600 26.074 10.535 1.00 30.41 ? 1006 DG A C6 1 ATOM 99 O O6 . DG A 1 5 ? 6.581 25.391 10.595 1.00 28.02 ? 1006 DG A O6 1 ATOM 100 N N1 . DG A 1 5 ? 8.364 26.171 9.371 1.00 28.17 ? 1006 DG A N1 1 ATOM 101 C C2 . DG A 1 5 ? 9.497 26.900 9.225 1.00 23.46 ? 1006 DG A C2 1 ATOM 102 N N2 . DG A 1 5 ? 10.135 26.896 8.030 1.00 27.96 ? 1006 DG A N2 1 ATOM 103 N N3 . DG A 1 5 ? 10.063 27.643 10.167 1.00 30.96 ? 1006 DG A N3 1 ATOM 104 C C4 . DG A 1 5 ? 9.334 27.558 11.291 1.00 22.33 ? 1006 DG A C4 1 ATOM 105 O "O5'" . DC B 2 1 ? 23.720 24.147 -1.124 0.00 45.10 ? 2001 DC B "O5'" 1 ATOM 106 C "C5'" . DC B 2 1 ? 22.561 23.313 -0.778 1.00 45.10 ? 2001 DC B "C5'" 1 ATOM 107 C "C4'" . DC B 2 1 ? 21.378 24.083 -1.493 1.00 38.02 ? 2001 DC B "C4'" 1 ATOM 108 O "O4'" . DC B 2 1 ? 21.746 24.487 -2.859 1.00 31.70 ? 2001 DC B "O4'" 1 ATOM 109 C "C3'" . DC B 2 1 ? 19.991 23.351 -1.581 1.00 39.59 ? 2001 DC B "C3'" 1 ATOM 110 O "O3'" . DC B 2 1 ? 19.038 24.250 -1.408 1.00 40.63 ? 2001 DC B "O3'" 1 ATOM 111 C "C2'" . DC B 2 1 ? 20.116 22.774 -2.990 1.00 36.91 ? 2001 DC B "C2'" 1 ATOM 112 C "C1'" . DC B 2 1 ? 20.688 23.968 -3.780 1.00 29.07 ? 2001 DC B "C1'" 1 ATOM 113 N N1 . DC B 2 1 ? 21.347 23.802 -5.037 1.00 30.54 ? 2001 DC B N1 1 ATOM 114 C C2 . DC B 2 1 ? 20.921 24.591 -6.119 1.00 30.19 ? 2001 DC B C2 1 ATOM 115 O O2 . DC B 2 1 ? 19.999 25.357 -5.865 1.00 25.89 ? 2001 DC B O2 1 ATOM 116 N N3 . DC B 2 1 ? 21.499 24.486 -7.326 1.00 34.39 ? 2001 DC B N3 1 ATOM 117 C C4 . DC B 2 1 ? 22.500 23.623 -7.519 1.00 32.76 ? 2001 DC B C4 1 ATOM 118 N N4 . DC B 2 1 ? 23.056 23.543 -8.739 1.00 30.68 ? 2001 DC B N4 1 ATOM 119 C C5 . DC B 2 1 ? 22.968 22.807 -6.451 1.00 38.59 ? 2001 DC B C5 1 ATOM 120 C C6 . DC B 2 1 ? 22.377 22.923 -5.256 1.00 33.93 ? 2001 DC B C6 1 ATOM 121 P P . DG B 2 2 ? 18.022 23.654 -0.213 1.00 52.32 ? 2002 DG B P 1 ATOM 122 O OP1 . DG B 2 2 ? 17.844 22.307 -0.554 1.00 75.81 ? 2002 DG B OP1 1 ATOM 123 O OP2 . DG B 2 2 ? 17.006 24.618 -0.096 1.00 45.54 ? 2002 DG B OP2 1 ATOM 124 O "O5'" . DG B 2 2 ? 18.928 23.705 1.116 1.00 33.45 ? 2002 DG B "O5'" 1 ATOM 125 C "C5'" . DG B 2 2 ? 19.090 25.171 1.274 1.00 33.62 ? 2002 DG B "C5'" 1 ATOM 126 C "C4'" . DG B 2 2 ? 19.090 25.428 2.828 1.00 33.56 ? 2002 DG B "C4'" 1 ATOM 127 O "O4'" . DG B 2 2 ? 17.747 25.453 3.438 1.00 29.07 ? 2002 DG B "O4'" 1 ATOM 128 C "C3'" . DG B 2 2 ? 19.940 24.429 3.700 1.00 29.01 ? 2002 DG B "C3'" 1 ATOM 129 O "O3'" . DG B 2 2 ? 21.180 24.785 3.574 1.00 27.53 ? 2002 DG B "O3'" 1 ATOM 130 C "C2'" . DG B 2 2 ? 19.363 24.694 5.079 1.00 31.39 ? 2002 DG B "C2'" 1 ATOM 131 C "C1'" . DG B 2 2 ? 17.882 24.977 4.852 1.00 28.62 ? 2002 DG B "C1'" 1 ATOM 132 N N9 . DG B 2 2 ? 16.850 23.925 4.918 1.00 30.46 ? 2002 DG B N9 1 ATOM 133 C C8 . DG B 2 2 ? 16.250 23.219 3.909 1.00 33.67 ? 2002 DG B C8 1 ATOM 134 N N7 . DG B 2 2 ? 15.376 22.364 4.339 1.00 33.60 ? 2002 DG B N7 1 ATOM 135 C C5 . DG B 2 2 ? 15.389 22.505 5.735 1.00 27.36 ? 2002 DG B C5 1 ATOM 136 C C6 . DG B 2 2 ? 14.670 21.860 6.765 1.00 25.09 ? 2002 DG B C6 1 ATOM 137 O O6 . DG B 2 2 ? 13.809 20.974 6.702 1.00 30.24 ? 2002 DG B O6 1 ATOM 138 N N1 . DG B 2 2 ? 15.035 22.348 8.022 1.00 24.08 ? 2002 DG B N1 1 ATOM 139 C C2 . DG B 2 2 ? 15.969 23.323 8.232 1.00 26.47 ? 2002 DG B C2 1 ATOM 140 N N2 . DG B 2 2 ? 16.218 23.692 9.492 1.00 30.62 ? 2002 DG B N2 1 ATOM 141 N N3 . DG B 2 2 ? 16.656 23.942 7.295 1.00 25.68 ? 2002 DG B N3 1 ATOM 142 C C4 . DG B 2 2 ? 16.294 23.461 6.091 1.00 23.92 ? 2002 DG B C4 1 HETATM 143 N N1 . BRU B 2 3 ? 20.051 22.069 8.460 1.00 31.56 ? 2003 BRU B N1 1 HETATM 144 C C2 . BRU B 2 3 ? 19.167 21.508 9.349 1.00 33.09 ? 2003 BRU B C2 1 HETATM 145 N N3 . BRU B 2 3 ? 18.184 20.712 8.824 1.00 28.70 ? 2003 BRU B N3 1 HETATM 146 C C4 . BRU B 2 3 ? 17.967 20.397 7.498 1.00 23.53 ? 2003 BRU B C4 1 HETATM 147 C C5 . BRU B 2 3 ? 18.948 21.034 6.639 1.00 25.91 ? 2003 BRU B C5 1 HETATM 148 C C6 . BRU B 2 3 ? 19.897 21.798 7.115 1.00 22.44 ? 2003 BRU B C6 1 HETATM 149 O O2 . BRU B 2 3 ? 19.275 21.721 10.541 1.00 30.55 ? 2003 BRU B O2 1 HETATM 150 O O4 . BRU B 2 3 ? 17.075 19.684 7.065 1.00 27.32 ? 2003 BRU B O4 1 HETATM 151 BR BR . BRU B 2 3 ? 18.915 20.806 4.795 1.00 34.98 ? 2003 BRU B BR 1 HETATM 152 C "C1'" . BRU B 2 3 ? 21.111 22.908 8.907 1.00 24.97 ? 2003 BRU B "C1'" 1 HETATM 153 C "C2'" . BRU B 2 3 ? 22.533 22.380 8.572 1.00 22.51 ? 2003 BRU B "C2'" 1 HETATM 154 C "C3'" . BRU B 2 3 ? 23.376 23.652 8.534 1.00 28.02 ? 2003 BRU B "C3'" 1 HETATM 155 C "C4'" . BRU B 2 3 ? 22.377 24.669 7.912 1.00 25.26 ? 2003 BRU B "C4'" 1 HETATM 156 O "O3'" . BRU B 2 3 ? 23.727 24.088 9.741 1.00 38.13 ? 2003 BRU B "O3'" 1 HETATM 157 O "O4'" . BRU B 2 3 ? 21.003 24.214 8.247 1.00 30.22 ? 2003 BRU B "O4'" 1 HETATM 158 C "C5'" . BRU B 2 3 ? 22.575 24.973 6.367 1.00 26.33 ? 2003 BRU B "C5'" 1 HETATM 159 O "O5'" . BRU B 2 3 ? 22.115 23.761 5.760 1.00 27.05 ? 2003 BRU B "O5'" 1 HETATM 160 P P . BRU B 2 3 ? 22.337 23.723 4.120 1.00 34.53 ? 2003 BRU B P 1 HETATM 161 O OP1 . BRU B 2 3 ? 23.556 24.404 3.948 1.00 31.16 ? 2003 BRU B OP1 1 HETATM 162 O OP2 . BRU B 2 3 ? 21.946 22.450 3.724 1.00 36.00 ? 2003 BRU B OP2 1 ATOM 163 P P . DA B 2 4 ? 24.830 23.226 10.687 1.00 41.10 ? 2004 DA B P 1 ATOM 164 O OP1 . DA B 2 4 ? 25.493 24.237 11.381 1.00 43.62 ? 2004 DA B OP1 1 ATOM 165 O OP2 . DA B 2 4 ? 25.303 22.212 9.833 1.00 35.26 ? 2004 DA B OP2 1 ATOM 166 O "O5'" . DA B 2 4 ? 23.871 22.491 11.772 1.00 32.27 ? 2004 DA B "O5'" 1 ATOM 167 C "C5'" . DA B 2 4 ? 22.997 23.364 12.571 1.00 32.23 ? 2004 DA B "C5'" 1 ATOM 168 C "C4'" . DA B 2 4 ? 22.425 22.379 13.664 1.00 35.81 ? 2004 DA B "C4'" 1 ATOM 169 O "O4'" . DA B 2 4 ? 21.266 21.561 13.217 1.00 33.04 ? 2004 DA B "O4'" 1 ATOM 170 C "C3'" . DA B 2 4 ? 23.501 21.401 14.303 1.00 28.78 ? 2004 DA B "C3'" 1 ATOM 171 O "O3'" . DA B 2 4 ? 23.259 21.345 15.621 1.00 30.11 ? 2004 DA B "O3'" 1 ATOM 172 C "C2'" . DA B 2 4 ? 23.211 20.168 13.521 1.00 23.45 ? 2004 DA B "C2'" 1 ATOM 173 C "C1'" . DA B 2 4 ? 21.677 20.150 13.257 1.00 24.07 ? 2004 DA B "C1'" 1 ATOM 174 N N9 . DA B 2 4 ? 21.174 19.529 12.027 1.00 26.58 ? 2004 DA B N9 1 ATOM 175 C C8 . DA B 2 4 ? 21.683 19.771 10.768 1.00 25.10 ? 2004 DA B C8 1 ATOM 176 N N7 . DA B 2 4 ? 21.067 19.104 9.835 1.00 29.60 ? 2004 DA B N7 1 ATOM 177 C C5 . DA B 2 4 ? 20.101 18.374 10.502 1.00 22.58 ? 2004 DA B C5 1 ATOM 178 C C6 . DA B 2 4 ? 19.131 17.475 10.049 1.00 23.23 ? 2004 DA B C6 1 ATOM 179 N N6 . DA B 2 4 ? 18.989 17.157 8.763 1.00 27.84 ? 2004 DA B N6 1 ATOM 180 N N1 . DA B 2 4 ? 18.317 16.922 10.968 1.00 25.46 ? 2004 DA B N1 1 ATOM 181 C C2 . DA B 2 4 ? 18.487 17.266 12.256 1.00 27.83 ? 2004 DA B C2 1 ATOM 182 N N3 . DA B 2 4 ? 19.363 18.099 12.790 1.00 24.44 ? 2004 DA B N3 1 ATOM 183 C C4 . DA B 2 4 ? 20.156 18.634 11.861 1.00 22.82 ? 2004 DA B C4 1 ATOM 184 P P . DC B 2 5 ? 24.347 20.624 16.648 1.00 30.52 ? 2005 DC B P 1 ATOM 185 O OP1 . DC B 2 5 ? 23.962 21.104 17.939 1.00 35.82 ? 2005 DC B OP1 1 ATOM 186 O OP2 . DC B 2 5 ? 25.608 20.731 16.104 1.00 32.24 ? 2005 DC B OP2 1 ATOM 187 O "O5'" . DC B 2 5 ? 23.925 19.059 16.645 1.00 25.15 ? 2005 DC B "O5'" 1 ATOM 188 C "C5'" . DC B 2 5 ? 22.623 18.756 17.241 1.00 30.40 ? 2005 DC B "C5'" 1 ATOM 189 C "C4'" . DC B 2 5 ? 22.394 17.245 16.849 1.00 21.23 ? 2005 DC B "C4'" 1 ATOM 190 O "O4'" . DC B 2 5 ? 21.937 17.100 15.425 1.00 21.67 ? 2005 DC B "O4'" 1 ATOM 191 C "C3'" . DC B 2 5 ? 23.572 16.246 17.049 1.00 17.30 ? 2005 DC B "C3'" 1 ATOM 192 O "O3'" . DC B 2 5 ? 23.149 15.198 17.795 1.00 22.47 ? 2005 DC B "O3'" 1 ATOM 193 C "C2'" . DC B 2 5 ? 23.907 15.828 15.642 1.00 23.42 ? 2005 DC B "C2'" 1 ATOM 194 C "C1'" . DC B 2 5 ? 22.522 15.834 14.954 1.00 23.38 ? 2005 DC B "C1'" 1 ATOM 195 N N1 . DC B 2 5 ? 22.462 15.873 13.543 1.00 21.43 ? 2005 DC B N1 1 ATOM 196 C C2 . DC B 2 5 ? 21.428 15.137 12.931 1.00 22.04 ? 2005 DC B C2 1 ATOM 197 O O2 . DC B 2 5 ? 20.681 14.521 13.705 1.00 24.22 ? 2005 DC B O2 1 ATOM 198 N N3 . DC B 2 5 ? 21.315 15.142 11.578 1.00 24.07 ? 2005 DC B N3 1 ATOM 199 C C4 . DC B 2 5 ? 22.181 15.843 10.843 1.00 20.29 ? 2005 DC B C4 1 ATOM 200 N N4 . DC B 2 5 ? 21.980 15.780 9.515 1.00 24.17 ? 2005 DC B N4 1 ATOM 201 C C5 . DC B 2 5 ? 23.237 16.610 11.410 1.00 17.66 ? 2005 DC B C5 1 ATOM 202 C C6 . DC B 2 5 ? 23.319 16.591 12.758 1.00 20.41 ? 2005 DC B C6 1 ATOM 203 P P . DG B 2 6 ? 24.246 14.249 18.615 1.00 23.28 ? 2006 DG B P 1 ATOM 204 O OP1 . DG B 2 6 ? 23.467 13.573 19.592 1.00 24.50 ? 2006 DG B OP1 1 ATOM 205 O OP2 . DG B 2 6 ? 25.347 15.032 19.000 1.00 26.51 ? 2006 DG B OP2 1 ATOM 206 O "O5'" . DG B 2 6 ? 24.712 13.181 17.519 1.00 22.76 ? 2006 DG B "O5'" 1 ATOM 207 C "C5'" . DG B 2 6 ? 23.655 12.316 16.918 1.00 25.30 ? 2006 DG B "C5'" 1 ATOM 208 C "C4'" . DG B 2 6 ? 24.499 11.197 16.176 1.00 22.55 ? 2006 DG B "C4'" 1 ATOM 209 O "O4'" . DG B 2 6 ? 25.444 11.771 15.171 1.00 20.46 ? 2006 DG B "O4'" 1 ATOM 210 C "C3'" . DG B 2 6 ? 25.299 10.200 17.089 1.00 23.66 ? 2006 DG B "C3'" 1 ATOM 211 O "O3'" . DG B 2 6 ? 24.563 9.116 17.435 1.00 21.65 ? 2006 DG B "O3'" 1 ATOM 212 C "C2'" . DG B 2 6 ? 26.500 9.905 16.167 1.00 22.02 ? 2006 DG B "C2'" 1 ATOM 213 C "C1'" . DG B 2 6 ? 26.802 11.281 15.579 1.00 24.40 ? 2006 DG B "C1'" 1 ATOM 214 N N9 . DG B 2 6 ? 27.301 12.415 16.357 1.00 22.03 ? 2006 DG B N9 1 ATOM 215 C C8 . DG B 2 6 ? 27.765 12.350 17.669 1.00 22.01 ? 2006 DG B C8 1 ATOM 216 N N7 . DG B 2 6 ? 28.150 13.487 18.138 1.00 24.53 ? 2006 DG B N7 1 ATOM 217 C C5 . DG B 2 6 ? 27.940 14.380 17.094 1.00 27.88 ? 2006 DG B C5 1 ATOM 218 C C6 . DG B 2 6 ? 28.167 15.785 16.988 1.00 27.82 ? 2006 DG B C6 1 ATOM 219 O O6 . DG B 2 6 ? 28.627 16.572 17.841 1.00 27.78 ? 2006 DG B O6 1 ATOM 220 N N1 . DG B 2 6 ? 27.808 16.296 15.734 1.00 27.74 ? 2006 DG B N1 1 ATOM 221 C C2 . DG B 2 6 ? 27.294 15.517 14.724 1.00 21.11 ? 2006 DG B C2 1 ATOM 222 N N2 . DG B 2 6 ? 26.988 16.146 13.556 1.00 21.02 ? 2006 DG B N2 1 ATOM 223 N N3 . DG B 2 6 ? 27.085 14.236 14.817 1.00 25.23 ? 2006 DG B N3 1 ATOM 224 C C4 . DG B 2 6 ? 27.420 13.715 16.009 1.00 21.79 ? 2006 DG B C4 1 HETATM 225 CO CO . CO C 3 . ? 18.402 12.300 5.632 0.50 41.76 ? 4002 CO A CO 1 HETATM 226 C C1 A 8AD D 4 . ? 8.724 21.672 9.269 0.60 32.53 ? 3014 8AD A C1 1 HETATM 227 C C1 B 8AD D 4 . ? 9.996 22.681 7.858 0.20 26.76 ? 3014 8AD A C1 1 HETATM 228 C C2 A 8AD D 4 . ? 7.917 20.752 8.647 0.60 47.38 ? 3014 8AD A C2 1 HETATM 229 C C2 B 8AD D 4 . ? 9.216 22.155 8.859 0.20 28.85 ? 3014 8AD A C2 1 HETATM 230 C C3 A 8AD D 4 . ? 8.062 20.463 7.311 0.60 48.09 ? 3014 8AD A C3 1 HETATM 231 C C3 B 8AD D 4 . ? 9.430 22.548 10.160 0.20 24.47 ? 3014 8AD A C3 1 HETATM 232 C C4 A 8AD D 4 . ? 9.072 21.053 6.523 0.60 36.10 ? 3014 8AD A C4 1 HETATM 233 C C4 B 8AD D 4 . ? 10.412 23.487 10.543 0.20 24.55 ? 3014 8AD A C4 1 HETATM 234 C C5 A 8AD D 4 . ? 12.504 24.236 6.123 0.60 23.75 ? 3014 8AD A C5 1 HETATM 235 C C5 B 8AD D 4 . ? 13.938 26.346 9.252 0.20 14.48 ? 3014 8AD A C5 1 HETATM 236 C C6 A 8AD D 4 . ? 13.456 25.108 6.649 0.60 33.06 ? 3014 8AD A C6 1 HETATM 237 C C6 B 8AD D 4 . ? 14.791 26.948 8.340 0.20 12.06 ? 3014 8AD A C6 1 HETATM 238 C C7 A 8AD D 4 . ? 13.433 25.467 7.992 0.60 24.74 ? 3014 8AD A C7 1 HETATM 239 C C7 B 8AD D 4 . ? 14.670 26.649 6.982 0.20 21.10 ? 3014 8AD A C7 1 HETATM 240 C C8 A 8AD D 4 . ? 12.527 24.854 8.831 0.60 30.35 ? 3014 8AD A C8 1 HETATM 241 C C8 B 8AD D 4 . ? 13.697 25.756 6.555 0.20 22.86 ? 3014 8AD A C8 1 HETATM 242 C C9 A 8AD D 4 . ? 10.581 23.319 9.179 0.60 23.95 ? 3014 8AD A C9 1 HETATM 243 C C9 B 8AD D 4 . ? 11.845 24.148 7.097 0.20 20.98 ? 3014 8AD A C9 1 HETATM 244 N N10 A 8AD D 4 . ? 10.802 22.686 6.450 0.60 29.99 ? 3014 8AD A N10 1 HETATM 245 N N10 B 8AD D 4 . ? 12.186 24.904 9.774 0.20 29.24 ? 3014 8AD A N10 1 HETATM 246 C C11 A 8AD D 4 . ? 9.737 22.342 8.567 0.60 29.18 ? 3014 8AD A C11 1 HETATM 247 C C11 B 8AD D 4 . ? 11.028 23.596 8.129 0.20 21.77 ? 3014 8AD A C11 1 HETATM 248 C C12 A 8AD D 4 . ? 9.899 22.030 7.161 0.60 20.41 ? 3014 8AD A C12 1 HETATM 249 C C12 B 8AD D 4 . ? 11.254 24.003 9.503 0.20 22.30 ? 3014 8AD A C12 1 HETATM 250 C C13 A 8AD D 4 . ? 11.589 23.904 8.373 0.60 20.26 ? 3014 8AD A C13 1 HETATM 251 C C13 B 8AD D 4 . ? 12.833 25.096 7.462 0.20 23.95 ? 3014 8AD A C13 1 HETATM 252 C C14 A 8AD D 4 . ? 11.632 23.551 6.980 0.60 17.86 ? 3014 8AD A C14 1 HETATM 253 C C14 B 8AD D 4 . ? 12.969 25.428 8.859 0.20 22.73 ? 3014 8AD A C14 1 HETATM 254 N N9 A 8AD D 4 . ? 10.464 23.658 10.489 0.60 30.53 ? 3014 8AD A N9 1 HETATM 255 N N9 B 8AD D 4 . ? 11.587 23.846 5.796 0.20 7.71 ? 3014 8AD A N9 1 HETATM 256 CO CO . CO E 3 . ? 28.880 13.530 20.208 0.50 27.80 ? 4001 CO B CO 1 HETATM 257 O O . HOH F 5 . ? 16.670 20.246 15.415 1.00 27.51 ? 4006 HOH A O 1 HETATM 258 O O . HOH F 5 . ? 15.432 19.499 17.911 1.00 34.92 ? 4010 HOH A O 1 HETATM 259 O O . HOH F 5 . ? 10.285 26.584 20.208 0.50 44.41 ? 4016 HOH A O 1 HETATM 260 O O . HOH F 5 . ? 15.690 21.390 19.827 1.00 43.09 ? 4017 HOH A O 1 HETATM 261 O O . HOH F 5 . ? 21.660 13.292 5.874 0.50 51.23 ? 4018 HOH A O 1 HETATM 262 O O . HOH G 5 . ? 15.489 26.584 0.000 0.25 27.81 ? 4003 HOH B O 1 HETATM 263 O O . HOH G 5 . ? 24.431 7.497 15.298 1.00 25.80 ? 4004 HOH B O 1 HETATM 264 O O . HOH G 5 . ? 21.015 21.261 1.999 1.00 46.50 ? 4005 HOH B O 1 HETATM 265 O O . HOH G 5 . ? 30.104 11.715 19.643 0.50 20.33 ? 4007 HOH B O 1 HETATM 266 O O . HOH G 5 . ? 23.951 17.525 8.014 1.00 37.11 ? 4008 HOH B O 1 HETATM 267 O O . HOH G 5 . ? 30.495 14.195 19.736 0.50 18.75 ? 4009 HOH B O 1 HETATM 268 O O . HOH G 5 . ? 23.453 9.021 20.163 1.00 39.40 ? 4011 HOH B O 1 HETATM 269 O O . HOH G 5 . ? 31.977 15.443 17.280 1.00 35.71 ? 4012 HOH B O 1 HETATM 270 O O . HOH G 5 . ? 32.838 11.839 19.171 1.00 41.50 ? 4013 HOH B O 1 HETATM 271 O O . HOH G 5 . ? 21.354 18.572 7.158 1.00 32.79 ? 4014 HOH B O 1 HETATM 272 O O . HOH G 5 . ? 15.048 25.680 1.778 0.50 29.97 ? 4015 HOH B O 1 HETATM 273 O O . HOH G 5 . ? 30.297 9.347 20.691 1.00 42.81 ? 4019 HOH B O 1 HETATM 274 O O . HOH G 5 . ? 22.393 20.175 5.368 1.00 34.48 ? 4020 HOH B O 1 HETATM 275 O O . HOH G 5 . ? 27.385 19.319 14.940 1.00 45.59 ? 4021 HOH B O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 31 BR BR . BRU A 2 ? 0.4838 0.5175 0.3731 0.0950 -0.0719 -0.0006 1003 BRU A BR 151 BR BR . BRU B 3 ? 0.5871 0.3982 0.3439 0.1529 0.0741 0.0006 2003 BRU B BR 225 CO CO . CO C . ? 0.5889 0.5953 0.4025 0.1416 0.0975 -0.0001 4002 CO A CO 256 CO CO . CO E . ? 0.2542 0.4496 0.3524 0.0000 -0.0081 0.0000 4001 CO B CO # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1002 1002 DG G A . n A 1 2 BRU 2 1003 1003 BRU U A . n A 1 3 DA 3 1004 1004 DA A A . n A 1 4 DC 4 1005 1005 DC C A . n A 1 5 DG 5 1006 1006 DG G A . n B 2 1 DC 1 2001 2001 DC C B . n B 2 2 DG 2 2002 2002 DG G B . n B 2 3 BRU 3 2003 2003 BRU U B . n B 2 4 DA 4 2004 2004 DA A B . n B 2 5 DC 5 2005 2005 DC C B . n B 2 6 DG 6 2006 2006 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CO 1 4002 4002 CO CO A . D 4 8AD 1 3014 3014 8AD 8AD A . E 3 CO 1 4001 4001 CO CO B . F 5 HOH 1 4006 4006 HOH HOH A . F 5 HOH 2 4010 4010 HOH HOH A . F 5 HOH 3 4016 4016 HOH HOH A . F 5 HOH 4 4017 4017 HOH HOH A . F 5 HOH 5 4018 4018 HOH HOH A . G 5 HOH 1 4003 4003 HOH HOH B . G 5 HOH 2 4004 4004 HOH HOH B . G 5 HOH 3 4005 4005 HOH HOH B . G 5 HOH 4 4007 4007 HOH HOH B . G 5 HOH 5 4008 4008 HOH HOH B . G 5 HOH 6 4009 4009 HOH HOH B . G 5 HOH 7 4011 4011 HOH HOH B . G 5 HOH 8 4012 4012 HOH HOH B . G 5 HOH 9 4013 4013 HOH HOH B . G 5 HOH 10 4014 4014 HOH HOH B . G 5 HOH 11 4015 4015 HOH HOH B . G 5 HOH 12 4019 4019 HOH HOH B . G 5 HOH 13 4020 4020 HOH HOH B . G 5 HOH 14 4021 4021 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 2 A BRU 1003 ? DU ? 2 B BRU 3 B BRU 2003 ? DU ? # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A 8AD 3014 ? D 8AD . 2 1 B CO 4001 ? E CO . 3 1 A HOH 4016 ? F HOH . 4 1 A HOH 4018 ? F HOH . 5 1 B HOH 4003 ? G HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 N7 ? B DG 6 ? B DG 2006 ? 1_555 CO ? E CO . ? B CO 4001 ? 1_555 O ? G HOH . ? B HOH 4007 ? 1_555 85.9 ? 2 N7 ? B DG 6 ? B DG 2006 ? 1_555 CO ? E CO . ? B CO 4001 ? 1_555 O ? G HOH . ? B HOH 4009 ? 1_555 93.3 ? 3 O ? G HOH . ? B HOH 4007 ? 1_555 CO ? E CO . ? B CO 4001 ? 1_555 O ? G HOH . ? B HOH 4009 ? 1_555 75.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2000-10-30 2 'Structure model' 1 1 2007-10-16 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2019-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_struct_special_symmetry 2 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 3 4 'Structure model' software 4 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXL-97 refinement . ? 1 CNS refinement . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 CNS phasing . ? 5 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DG 1002 ? ? "C4'" A DG 1002 ? ? 1.575 1.512 0.063 0.007 N 2 1 "O4'" A DG 1002 ? ? "C1'" A DG 1002 ? ? 1.491 1.420 0.071 0.011 N 3 1 "O3'" A DG 1002 ? ? "C3'" A DG 1002 ? ? 1.335 1.419 -0.084 0.006 N 4 1 "O3'" A DG 1002 ? ? P A BRU 1003 ? ? 1.688 1.607 0.081 0.012 Y 5 1 "C5'" A DA 1004 ? ? "C4'" A DA 1004 ? ? 1.572 1.512 0.060 0.007 N 6 1 "O3'" A DA 1004 ? ? "C3'" A DA 1004 ? ? 1.320 1.419 -0.099 0.006 N 7 1 "C5'" A DC 1005 ? ? "C4'" A DC 1005 ? ? 1.585 1.512 0.073 0.007 N 8 1 "O3'" A DC 1005 ? ? "C3'" A DC 1005 ? ? 1.310 1.419 -0.109 0.006 N 9 1 "C5'" A DG 1006 ? ? "C4'" A DG 1006 ? ? 1.579 1.512 0.067 0.007 N 10 1 "O4'" A DG 1006 ? ? "C1'" A DG 1006 ? ? 1.487 1.420 0.067 0.011 N 11 1 "O3'" A DG 1006 ? ? "C3'" A DG 1006 ? ? 1.330 1.419 -0.089 0.006 N 12 1 "C5'" B DC 2001 ? ? "C4'" B DC 2001 ? ? 1.582 1.512 0.070 0.007 N 13 1 "O4'" B DC 2001 ? ? "C1'" B DC 2001 ? ? 1.496 1.420 0.076 0.011 N 14 1 "O3'" B DC 2001 ? ? "C3'" B DC 2001 ? ? 1.321 1.419 -0.098 0.006 N 15 1 "C5'" B DG 2002 ? ? "C4'" B DG 2002 ? ? 1.575 1.512 0.063 0.007 N 16 1 "O4'" B DG 2002 ? ? "C1'" B DG 2002 ? ? 1.498 1.420 0.078 0.011 N 17 1 "O3'" B DG 2002 ? ? "C3'" B DG 2002 ? ? 1.296 1.419 -0.123 0.006 N 18 1 "O3'" B BRU 2003 ? ? P B DA 2004 ? ? 1.690 1.607 0.083 0.012 Y 19 1 "C5'" B DA 2004 ? ? "C4'" B DA 2004 ? ? 1.579 1.512 0.067 0.007 N 20 1 "O3'" B DA 2004 ? ? "C3'" B DA 2004 ? ? 1.341 1.419 -0.078 0.006 N 21 1 P B DC 2005 ? ? OP2 B DC 2005 ? ? 1.377 1.485 -0.108 0.017 N 22 1 "C5'" B DC 2005 ? ? "C4'" B DC 2005 ? ? 1.578 1.512 0.066 0.007 N 23 1 "O3'" B DC 2005 ? ? "C3'" B DC 2005 ? ? 1.354 1.419 -0.065 0.006 N 24 1 "C5'" B DG 2006 ? ? "C4'" B DG 2006 ? ? 1.586 1.512 0.074 0.007 N 25 1 "O4'" B DG 2006 ? ? "C1'" B DG 2006 ? ? 1.500 1.420 0.080 0.011 N 26 1 "O3'" B DG 2006 ? ? "C3'" B DG 2006 ? ? 1.355 1.419 -0.064 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" A DG 1002 ? ? "C5'" A DG 1002 ? ? "C4'" A DG 1002 ? ? 101.67 109.40 -7.73 0.80 N 2 1 N9 A DG 1002 ? ? "C1'" A DG 1002 ? ? "C2'" A DG 1002 ? ? 125.55 114.30 11.25 1.40 N 3 1 "O4'" A DG 1002 ? ? "C1'" A DG 1002 ? ? N9 A DG 1002 ? ? 98.88 108.00 -9.12 0.70 N 4 1 "C3'" A BRU 1003 ? ? "O3'" A BRU 1003 ? ? P A DA 1004 ? ? 128.31 119.70 8.61 1.20 Y 5 1 OP1 A DA 1004 ? ? P A DA 1004 ? ? OP2 A DA 1004 ? ? 128.88 119.60 9.28 1.50 N 6 1 "O5'" A DA 1004 ? ? "C5'" A DA 1004 ? ? "C4'" A DA 1004 ? ? 102.65 109.40 -6.75 0.80 N 7 1 P A DA 1004 ? ? "O5'" A DA 1004 ? ? "C5'" A DA 1004 ? ? 108.92 120.90 -11.98 1.60 N 8 1 "O4'" A DA 1004 ? ? "C1'" A DA 1004 ? ? N9 A DA 1004 ? ? 102.94 108.00 -5.06 0.70 N 9 1 OP1 A DC 1005 ? ? P A DC 1005 ? ? OP2 A DC 1005 ? ? 130.15 119.60 10.55 1.50 N 10 1 "O5'" A DC 1005 ? ? "C5'" A DC 1005 ? ? "C4'" A DC 1005 ? ? 97.25 109.40 -12.15 0.80 N 11 1 "C1'" A DC 1005 ? ? "O4'" A DC 1005 ? ? "C4'" A DC 1005 ? ? 103.36 110.10 -6.74 1.00 N 12 1 "O5'" A DG 1006 ? ? "C5'" A DG 1006 ? ? "C4'" A DG 1006 ? ? 103.31 109.40 -6.09 0.80 N 13 1 "O4'" A DG 1006 ? ? "C1'" A DG 1006 ? ? N9 A DG 1006 ? ? 101.96 108.00 -6.04 0.70 N 14 1 C8 A DG 1006 ? ? N9 A DG 1006 ? ? C4 A DG 1006 ? ? 103.66 106.40 -2.74 0.40 N 15 1 N3 A DG 1006 ? ? C4 A DG 1006 ? ? N9 A DG 1006 ? ? 121.95 126.00 -4.05 0.60 N 16 1 N3 A DG 1006 ? ? C2 A DG 1006 ? ? N2 A DG 1006 ? ? 115.29 119.90 -4.61 0.70 N 17 1 "O5'" B DC 2001 ? ? "C5'" B DC 2001 ? ? "C4'" B DC 2001 ? ? 101.95 109.40 -7.45 0.80 N 18 1 C6 B DC 2001 ? ? N1 B DC 2001 ? ? C2 B DC 2001 ? ? 117.68 120.30 -2.62 0.40 N 19 1 N1 B DC 2001 ? ? C2 B DC 2001 ? ? O2 B DC 2001 ? ? 114.80 118.90 -4.10 0.60 N 20 1 "C3'" B DC 2001 ? ? "O3'" B DC 2001 ? ? P B DG 2002 ? ? 106.75 119.70 -12.95 1.20 Y 21 1 P B DG 2002 ? ? "O5'" B DG 2002 ? ? "C5'" B DG 2002 ? ? 100.41 120.90 -20.49 1.60 N 22 1 N9 B DG 2002 ? ? "C1'" B DG 2002 ? ? "C2'" B DG 2002 ? ? 122.72 114.30 8.42 1.40 N 23 1 "O4'" B DG 2002 ? ? "C1'" B DG 2002 ? ? N9 B DG 2002 ? ? 101.88 108.00 -6.12 0.70 N 24 1 N3 B DG 2002 ? ? C4 B DG 2002 ? ? N9 B DG 2002 ? ? 122.16 126.00 -3.84 0.60 N 25 1 OP1 B DA 2004 ? ? P B DA 2004 ? ? OP2 B DA 2004 ? ? 131.66 119.60 12.06 1.50 N 26 1 "O5'" B DA 2004 ? ? "C5'" B DA 2004 ? ? "C4'" B DA 2004 ? ? 102.77 109.40 -6.63 0.80 N 27 1 "O5'" B DC 2005 ? ? "C5'" B DC 2005 ? ? "C4'" B DC 2005 ? ? 103.07 109.40 -6.33 0.80 N 28 1 "O5'" B DG 2006 ? ? "C5'" B DG 2006 ? ? "C4'" B DG 2006 ? ? 102.74 109.40 -6.66 0.80 N 29 1 N9 B DG 2006 ? ? "C1'" B DG 2006 ? ? "C2'" B DG 2006 ? ? 124.15 114.30 9.85 1.40 N 30 1 "O4'" B DG 2006 ? ? "C1'" B DG 2006 ? ? N9 B DG 2006 ? ? 101.55 108.00 -6.45 0.70 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 8AD 3014 ? CD1 ? D 8AD 1 CD1 2 1 N 1 A 8AD 3014 ? OD1 ? D 8AD 1 OD1 3 1 N 1 A 8AD 3014 ? ND1 ? D 8AD 1 ND1 4 1 N 1 A 8AD 3014 ? ND2 ? D 8AD 1 ND2 5 1 N 1 A 8AD 3014 ? CD2 ? D 8AD 1 CD2 6 1 N 1 A 8AD 3014 ? CD3 ? D 8AD 1 CD3 7 1 N 1 A 8AD 3014 ? CD4 ? D 8AD 1 CD4 8 1 N 1 A 8AD 3014 ? CD5 ? D 8AD 1 CD5 9 1 N 1 A 8AD 3014 ? CD7 ? D 8AD 1 CD7 10 1 N 1 A 8AD 3014 ? CD8 ? D 8AD 1 CD8 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1FN1 'double helix' 1FN1 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 5 1_555 -0.422 -0.104 0.011 -8.993 5.109 1.438 1 A_DG1002:DC2005_B A 1002 ? B 2005 ? 19 1 1 A BRU 2 1_555 B DA 4 1_555 0.023 -0.122 0.225 1.924 -3.072 2.651 2 A_BRU1003:DA2004_B A 1003 ? B 2004 ? 20 1 1 A DA 3 1_555 B BRU 3 1_555 0.159 -0.139 -0.111 2.674 3.639 -4.728 3 A_DA1004:BRU2003_B A 1004 ? B 2003 ? 20 1 1 A DC 4 1_555 B DG 2 1_555 0.355 -0.071 -0.166 13.466 -1.144 3.992 4 A_DC1005:DG2002_B A 1005 ? B 2002 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 5 1_555 A BRU 2 1_555 B DA 4 1_555 -0.148 -0.313 3.128 -1.201 3.330 27.278 -1.437 0.031 3.072 7.023 2.533 27.502 1 AA_DG1002BRU1003:DA2004DC2005_BB A 1002 ? B 2005 ? A 1003 ? B 2004 ? 1 A BRU 2 1_555 B DA 4 1_555 A DA 3 1_555 B BRU 3 1_555 -0.066 -0.502 3.160 3.535 1.648 37.609 -0.980 0.540 3.117 2.547 -5.464 37.804 2 AA_BRU1003DA1004:BRU2003DA2004_BB A 1003 ? B 2004 ? A 1004 ? B 2003 ? 1 A DA 3 1_555 B BRU 3 1_555 A DC 4 1_555 B DG 2 1_555 1.099 -0.692 3.156 -2.260 5.173 29.599 -2.320 -2.546 2.906 10.011 4.374 30.121 3 AA_DA1004DC1005:DG2002BRU2003_BB A 1004 ? B 2003 ? A 1005 ? B 2002 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'COBALT (II) ION' CO 4 '9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE' 8AD 5 water HOH #