data_1Y86 # _entry.id 1Y86 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y86 pdb_00001y86 10.2210/pdb1y86/pdb NDB AD0038 ? ? RCSB RCSB031237 ? ? WWPDB D_1000031237 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Y7F ;Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-[hydroxy(methyleneamino)oxy]ethyl] Thymidine (T*) ; unspecified PDB 1Y84 ;Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(imidazolyl)ethyl] Thymidine (T*) ; unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y86 _pdbx_database_status.recvd_initial_deposition_date 2004-12-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Egli, M.' 1 'Minasov, G.' 2 'Tereshko, V.' 3 'Pallan, P.S.' 4 'Teplova, M.' 5 'Inamati, G.B.' 6 'Lesnik, E.A.' 7 'Owens, S.R.' 8 'Ross, B.S.' 9 'Prakash, T.P.' 10 'Manoharan, M.' 11 # _citation.id primary _citation.title ;Probing the Influence of Stereoelectronic Effects on the Biophysical Properties of Oligonucleotides: Comprehensive Analysis of the RNA Affinity, Nuclease Resistance, and Crystal Structure of Ten 2'-O-Ribonucleic Acid Modifications. ; _citation.journal_abbrev Biochemistry _citation.journal_volume 44 _citation.page_first 9045 _citation.page_last 9057 _citation.year 2005 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15966728 _citation.pdbx_database_id_DOI 10.1021/bi050574m # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Egli, M.' 1 ? primary 'Minasov, G.' 2 ? primary 'Tereshko, V.' 3 ? primary 'Pallan, P.S.' 4 ? primary 'Teplova, M.' 5 ? primary 'Inamati, G.B.' 6 ? primary 'Lesnik, E.A.' 7 ? primary 'Owens, S.R.' 8 ? primary 'Ross, B.S.' 9 ? primary 'Prakash, T.P.' 10 ? primary 'Manoharan, M.' 11 ? # _cell.entry_id 1Y86 _cell.length_a 25.263 _cell.length_b 44.184 _cell.length_c 45.392 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1Y86 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*GP*TP*AP*(125)P*AP*CP*GP*C)-3'" 3107.048 2 ? ? ? ? 2 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DC)(DG)(DT)(DA)(125)(DA)(DC)(DG)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GCGTAUACGC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 125 n 1 7 DA n 1 8 DC n 1 9 DG n 1 10 DC n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1Y86 _struct_ref.pdbx_db_accession 1Y86 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1Y86 A 1 ? 10 ? 1Y86 1 ? 10 ? 1 10 2 1 1Y86 B 1 ? 10 ? 1Y86 11 ? 20 ? 11 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 125 'RNA linking' n "2'-O-FLUOROETHYL-5-METHYL-URIDINE-5'-MONOPHOSPHATE" ? 'C12 H18 F N2 O9 P' 384.251 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # _exptl.entry_id 1Y86 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_percent_sol 39.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '10%MPD, 40mM Na-Cacodilate, 12 mM Spermine, 80mM NaCL, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MPD ? ? ? 1 2 1 'Na Cacodilate' ? ? ? 1 3 1 Spermine ? ? ? 1 4 1 NaCL ? ? ? 1 5 1 H2O ? ? ? 1 6 ? MPD ? ? ? 1 7 ? 'Na Cacodilate' ? ? ? 1 8 ? NaCL ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1998-08-13 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator No _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1Y86 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 1.70 _reflns.d_resolution_low 30.0 _reflns.number_all 5893 _reflns.number_obs 5893 _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs 0.074 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.2 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.0 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.70 _reflns_shell.d_res_low 1.76 _reflns_shell.percent_possible_all 87.4 _reflns_shell.Rmerge_I_obs 0.281 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_redundancy 4.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 499 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1Y86 _refine.ls_d_res_high 1.70 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_ls_sigma_I 0.0 _refine.ls_number_reflns_all 5758 _refine.ls_number_reflns_obs 5758 _refine.ls_number_reflns_R_free 623 _refine.ls_percent_reflns_obs 96.8 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.1707 _refine.ls_R_factor_R_free 0.1886 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'pdb entry 410D' _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details Random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model Isotropic _refine.B_iso_mean 23.7 _refine.aniso_B[1][1] -2.690 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] -2.393 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] 5.083 _refine.details 'Conjugate gradient refinement using maximum likelihood target for amplitudes' _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 412 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 103 _refine_hist.number_atoms_total 515 _refine_hist.d_res_high 1.70 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_d 0.0092 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.41 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.75 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.2466 _refine_ls_shell.percent_reflns_obs 86.4 _refine_ls_shell.R_factor_R_free 0.3169 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 49 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1Y86 _struct.title ;Crystal structure of the A-DNA GCGTAT*CGC with a 2'-O-[2-(fluoro)ethyl] Thymidine (T*) ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y86 _struct_keywords.pdbx_keywords DNA _struct_keywords.text ;A-DNA, O2'-modification, decamer, DNA ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'Chains A and B form duplex' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 5 "O3'" ? ? ? 1_555 A 125 6 P ? ? A DA 5 A 125 6 1_555 ? ? ? ? ? ? ? 1.604 ? ? covale2 covale both ? A 125 6 "O3'" ? ? ? 1_555 A DA 7 P ? ? A 125 6 A DA 7 1_555 ? ? ? ? ? ? ? 1.601 ? ? covale3 covale both ? B DA 5 "O3'" ? ? ? 1_555 B 125 6 P ? ? B DA 15 B 125 16 1_555 ? ? ? ? ? ? ? 1.619 ? ? covale4 covale both ? B 125 6 "O3'" ? ? ? 1_555 B DA 7 P ? ? B 125 16 B DA 17 1_555 ? ? ? ? ? ? ? 1.619 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 10 N3 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 10 O2 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 10 N4 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 4 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B 125 6 N3 ? ? A DA 5 B 125 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B 125 6 O4 ? ? A DA 5 B 125 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A 125 6 N3 ? ? ? 1_555 B DA 5 N1 ? ? A 125 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A 125 6 O4 ? ? ? 1_555 B DA 5 N6 ? ? A 125 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 4 N3 ? ? A DA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 4 O4 ? ? A DA 7 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 3 N1 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 3 O6 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 3 N2 ? ? A DC 8 B DG 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1Y86 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Y86 _atom_sites.fract_transf_matrix[1][1] 0.039584 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022633 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022030 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? -3.925 -5.429 16.480 1.00 32.08 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? -3.795 -6.467 17.443 1.00 26.36 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? -3.574 -7.777 16.728 1.00 25.74 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -4.705 -8.076 15.883 1.00 27.02 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? -2.383 -7.754 15.787 1.00 25.30 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? -1.220 -8.041 16.546 1.00 23.53 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? -2.738 -8.846 14.785 1.00 23.69 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -4.267 -8.696 14.671 1.00 24.12 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -4.692 -7.827 13.583 1.00 22.08 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? -5.404 -6.649 13.696 1.00 22.89 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? -5.622 -6.071 12.546 1.00 23.57 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? -5.023 -6.923 11.611 1.00 20.53 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? -4.960 -6.841 10.177 1.00 20.67 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? -5.413 -5.968 9.430 1.00 19.58 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? -4.292 -7.935 9.633 1.00 17.45 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? -3.783 -8.978 10.354 1.00 19.10 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? -3.212 -9.977 9.629 1.00 17.03 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? -3.830 -9.058 11.690 1.00 18.00 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? -4.455 -8.010 12.236 1.00 20.80 ? 1 DG A C4 1 ATOM 20 P P . DC A 1 2 ? 0.164 -7.323 16.184 1.00 23.84 ? 2 DC A P 1 ATOM 21 O OP1 . DC A 1 2 ? 1.145 -7.701 17.203 1.00 24.23 ? 2 DC A OP1 1 ATOM 22 O OP2 . DC A 1 2 ? -0.125 -5.900 15.916 1.00 24.87 ? 2 DC A OP2 1 ATOM 23 O "O5'" . DC A 1 2 ? 0.589 -7.979 14.796 1.00 22.00 ? 2 DC A "O5'" 1 ATOM 24 C "C5'" . DC A 1 2 ? 0.845 -9.403 14.693 1.00 22.67 ? 2 DC A "C5'" 1 ATOM 25 C "C4'" . DC A 1 2 ? 1.028 -9.788 13.244 1.00 20.58 ? 2 DC A "C4'" 1 ATOM 26 O "O4'" . DC A 1 2 ? -0.201 -9.568 12.525 1.00 18.81 ? 2 DC A "O4'" 1 ATOM 27 C "C3'" . DC A 1 2 ? 2.074 -8.972 12.498 1.00 20.68 ? 2 DC A "C3'" 1 ATOM 28 O "O3'" . DC A 1 2 ? 3.346 -9.557 12.721 1.00 20.49 ? 2 DC A "O3'" 1 ATOM 29 C "C2'" . DC A 1 2 ? 1.611 -9.081 11.052 1.00 20.03 ? 2 DC A "C2'" 1 ATOM 30 C "C1'" . DC A 1 2 ? 0.084 -9.130 11.192 1.00 19.74 ? 2 DC A "C1'" 1 ATOM 31 N N1 . DC A 1 2 ? -0.577 -7.826 10.986 1.00 17.44 ? 2 DC A N1 1 ATOM 32 C C2 . DC A 1 2 ? -0.874 -7.432 9.681 1.00 18.74 ? 2 DC A C2 1 ATOM 33 O O2 . DC A 1 2 ? -0.519 -8.182 8.743 1.00 20.04 ? 2 DC A O2 1 ATOM 34 N N3 . DC A 1 2 ? -1.529 -6.245 9.462 1.00 17.58 ? 2 DC A N3 1 ATOM 35 C C4 . DC A 1 2 ? -1.846 -5.465 10.494 1.00 19.64 ? 2 DC A C4 1 ATOM 36 N N4 . DC A 1 2 ? -2.530 -4.322 10.241 1.00 18.02 ? 2 DC A N4 1 ATOM 37 C C5 . DC A 1 2 ? -1.498 -5.823 11.845 1.00 19.00 ? 2 DC A C5 1 ATOM 38 C C6 . DC A 1 2 ? -0.891 -7.002 12.041 1.00 16.87 ? 2 DC A C6 1 ATOM 39 P P . DG A 1 3 ? 4.688 -8.744 12.359 1.00 21.42 ? 3 DG A P 1 ATOM 40 O OP1 . DG A 1 3 ? 5.832 -9.629 12.619 1.00 22.86 ? 3 DG A OP1 1 ATOM 41 O OP2 . DG A 1 3 ? 4.658 -7.391 12.982 1.00 23.30 ? 3 DG A OP2 1 ATOM 42 O "O5'" . DG A 1 3 ? 4.539 -8.629 10.782 1.00 20.39 ? 3 DG A "O5'" 1 ATOM 43 C "C5'" . DG A 1 3 ? 5.050 -7.513 10.049 1.00 18.92 ? 3 DG A "C5'" 1 ATOM 44 C "C4'" . DG A 1 3 ? 4.615 -7.625 8.605 1.00 18.19 ? 3 DG A "C4'" 1 ATOM 45 O "O4'" . DG A 1 3 ? 3.178 -7.497 8.554 1.00 17.68 ? 3 DG A "O4'" 1 ATOM 46 C "C3'" . DG A 1 3 ? 5.137 -6.513 7.710 1.00 19.42 ? 3 DG A "C3'" 1 ATOM 47 O "O3'" . DG A 1 3 ? 6.414 -6.871 7.199 1.00 20.17 ? 3 DG A "O3'" 1 ATOM 48 C "C2'" . DG A 1 3 ? 4.072 -6.417 6.638 1.00 19.56 ? 3 DG A "C2'" 1 ATOM 49 C "C1'" . DG A 1 3 ? 2.803 -6.723 7.435 1.00 18.79 ? 3 DG A "C1'" 1 ATOM 50 N N9 . DG A 1 3 ? 2.081 -5.548 7.924 1.00 17.56 ? 3 DG A N9 1 ATOM 51 C C8 . DG A 1 3 ? 1.786 -5.208 9.219 1.00 18.39 ? 3 DG A C8 1 ATOM 52 N N7 . DG A 1 3 ? 1.054 -4.124 9.306 1.00 19.99 ? 3 DG A N7 1 ATOM 53 C C5 . DG A 1 3 ? 0.886 -3.714 7.992 1.00 18.32 ? 3 DG A C5 1 ATOM 54 C C6 . DG A 1 3 ? 0.192 -2.612 7.465 1.00 19.15 ? 3 DG A C6 1 ATOM 55 O O6 . DG A 1 3 ? -0.454 -1.760 8.075 1.00 18.83 ? 3 DG A O6 1 ATOM 56 N N1 . DG A 1 3 ? 0.293 -2.554 6.075 1.00 17.66 ? 3 DG A N1 1 ATOM 57 C C2 . DG A 1 3 ? 0.990 -3.450 5.294 1.00 17.63 ? 3 DG A C2 1 ATOM 58 N N2 . DG A 1 3 ? 1.048 -3.189 3.941 1.00 14.85 ? 3 DG A N2 1 ATOM 59 N N3 . DG A 1 3 ? 1.610 -4.509 5.786 1.00 15.99 ? 3 DG A N3 1 ATOM 60 C C4 . DG A 1 3 ? 1.520 -4.575 7.128 1.00 16.03 ? 3 DG A C4 1 ATOM 61 P P . DT A 1 4 ? 7.477 -5.708 6.880 1.00 21.15 ? 4 DT A P 1 ATOM 62 O OP1 . DT A 1 4 ? 8.730 -6.430 6.515 1.00 24.12 ? 4 DT A OP1 1 ATOM 63 O OP2 . DT A 1 4 ? 7.517 -4.658 7.930 1.00 20.84 ? 4 DT A OP2 1 ATOM 64 O "O5'" . DT A 1 4 ? 6.847 -5.025 5.586 1.00 19.38 ? 4 DT A "O5'" 1 ATOM 65 C "C5'" . DT A 1 4 ? 6.980 -5.608 4.281 1.00 18.83 ? 4 DT A "C5'" 1 ATOM 66 C "C4'" . DT A 1 4 ? 6.589 -4.601 3.223 1.00 20.76 ? 4 DT A "C4'" 1 ATOM 67 O "O4'" . DT A 1 4 ? 5.185 -4.244 3.344 1.00 20.10 ? 4 DT A "O4'" 1 ATOM 68 C "C3'" . DT A 1 4 ? 7.327 -3.283 3.361 1.00 21.03 ? 4 DT A "C3'" 1 ATOM 69 O "O3'" . DT A 1 4 ? 8.639 -3.350 2.775 1.00 21.85 ? 4 DT A "O3'" 1 ATOM 70 C "C2'" . DT A 1 4 ? 6.387 -2.301 2.686 1.00 21.11 ? 4 DT A "C2'" 1 ATOM 71 C "C1'" . DT A 1 4 ? 5.005 -2.853 3.039 1.00 17.91 ? 4 DT A "C1'" 1 ATOM 72 N N1 . DT A 1 4 ? 4.396 -2.200 4.235 1.00 16.36 ? 4 DT A N1 1 ATOM 73 C C2 . DT A 1 4 ? 3.570 -1.106 4.052 1.00 18.52 ? 4 DT A C2 1 ATOM 74 O O2 . DT A 1 4 ? 3.415 -0.585 2.963 1.00 18.30 ? 4 DT A O2 1 ATOM 75 N N3 . DT A 1 4 ? 2.969 -0.626 5.207 1.00 16.49 ? 4 DT A N3 1 ATOM 76 C C4 . DT A 1 4 ? 3.183 -1.081 6.502 1.00 15.84 ? 4 DT A C4 1 ATOM 77 O O4 . DT A 1 4 ? 2.594 -0.565 7.458 1.00 16.09 ? 4 DT A O4 1 ATOM 78 C C5 . DT A 1 4 ? 4.125 -2.163 6.625 1.00 15.14 ? 4 DT A C5 1 ATOM 79 C C7 . DT A 1 4 ? 4.486 -2.646 7.992 1.00 17.04 ? 4 DT A C7 1 ATOM 80 C C6 . DT A 1 4 ? 4.655 -2.683 5.503 1.00 16.91 ? 4 DT A C6 1 ATOM 81 P P . DA A 1 5 ? 9.800 -2.430 3.373 1.00 24.29 ? 5 DA A P 1 ATOM 82 O OP1 . DA A 1 5 ? 10.977 -2.666 2.494 1.00 27.05 ? 5 DA A OP1 1 ATOM 83 O OP2 . DA A 1 5 ? 9.907 -2.655 4.840 1.00 23.96 ? 5 DA A OP2 1 ATOM 84 O "O5'" . DA A 1 5 ? 9.282 -0.938 3.123 1.00 22.56 ? 5 DA A "O5'" 1 ATOM 85 C "C5'" . DA A 1 5 ? 9.500 0.104 4.067 1.00 22.89 ? 5 DA A "C5'" 1 ATOM 86 C "C4'" . DA A 1 5 ? 8.740 1.331 3.625 1.00 18.33 ? 5 DA A "C4'" 1 ATOM 87 O "O4'" . DA A 1 5 ? 7.334 1.032 3.643 1.00 20.91 ? 5 DA A "O4'" 1 ATOM 88 C "C3'" . DA A 1 5 ? 8.877 2.599 4.444 1.00 18.57 ? 5 DA A "C3'" 1 ATOM 89 O "O3'" . DA A 1 5 ? 10.083 3.284 4.081 1.00 21.49 ? 5 DA A "O3'" 1 ATOM 90 C "C2'" . DA A 1 5 ? 7.613 3.349 4.048 1.00 16.73 ? 5 DA A "C2'" 1 ATOM 91 C "C1'" . DA A 1 5 ? 6.594 2.204 3.930 1.00 17.55 ? 5 DA A "C1'" 1 ATOM 92 N N9 . DA A 1 5 ? 5.890 1.977 5.187 1.00 17.16 ? 5 DA A N9 1 ATOM 93 C C8 . DA A 1 5 ? 6.088 1.005 6.140 1.00 16.97 ? 5 DA A C8 1 ATOM 94 N N7 . DA A 1 5 ? 5.308 1.132 7.194 1.00 16.62 ? 5 DA A N7 1 ATOM 95 C C5 . DA A 1 5 ? 4.524 2.245 6.898 1.00 17.24 ? 5 DA A C5 1 ATOM 96 C C6 . DA A 1 5 ? 3.471 2.909 7.594 1.00 15.71 ? 5 DA A C6 1 ATOM 97 N N6 . DA A 1 5 ? 2.985 2.532 8.800 1.00 14.38 ? 5 DA A N6 1 ATOM 98 N N1 . DA A 1 5 ? 2.930 3.992 6.997 1.00 14.67 ? 5 DA A N1 1 ATOM 99 C C2 . DA A 1 5 ? 3.377 4.378 5.800 1.00 15.15 ? 5 DA A C2 1 ATOM 100 N N3 . DA A 1 5 ? 4.327 3.839 5.043 1.00 17.18 ? 5 DA A N3 1 ATOM 101 C C4 . DA A 1 5 ? 4.872 2.770 5.661 1.00 16.82 ? 5 DA A C4 1 HETATM 102 P P . 125 A 1 6 ? 10.854 4.174 5.170 1.00 21.06 ? 6 125 A P 1 HETATM 103 O OP1 . 125 A 1 6 ? 12.037 4.717 4.442 1.00 23.91 ? 6 125 A OP1 1 HETATM 104 O OP2 . 125 A 1 6 ? 11.036 3.477 6.425 1.00 20.05 ? 6 125 A OP2 1 HETATM 105 O "O5'" . 125 A 1 6 ? 9.843 5.368 5.411 1.00 18.69 ? 6 125 A "O5'" 1 HETATM 106 C "C5'" . 125 A 1 6 ? 9.490 6.231 4.340 1.00 19.16 ? 6 125 A "C5'" 1 HETATM 107 C "C4'" . 125 A 1 6 ? 8.472 7.217 4.816 1.00 18.94 ? 6 125 A "C4'" 1 HETATM 108 O "O4'" . 125 A 1 6 ? 7.217 6.523 5.005 1.00 16.39 ? 6 125 A "O4'" 1 HETATM 109 C "C3'" . 125 A 1 6 ? 8.744 7.870 6.163 1.00 20.14 ? 6 125 A "C3'" 1 HETATM 110 O "O3'" . 125 A 1 6 ? 9.647 8.956 6.085 1.00 23.40 ? 6 125 A "O3'" 1 HETATM 111 C "C2'" . 125 A 1 6 ? 7.348 8.323 6.564 1.00 17.97 ? 6 125 A "C2'" 1 HETATM 112 O "O2'" . 125 A 1 6 ? 7.037 9.420 5.680 1.00 19.77 ? 6 125 A "O2'" 1 HETATM 113 C "C1'" . 125 A 1 6 ? 6.527 7.121 6.095 1.00 17.05 ? 6 125 A "C1'" 1 HETATM 114 N N1 . 125 A 1 6 ? 6.368 6.124 7.176 1.00 16.94 ? 6 125 A N1 1 HETATM 115 C C2 . 125 A 1 6 ? 5.318 6.346 8.052 1.00 17.85 ? 6 125 A C2 1 HETATM 116 O O2 . 125 A 1 6 ? 4.576 7.299 7.953 1.00 17.52 ? 6 125 A O2 1 HETATM 117 N N3 . 125 A 1 6 ? 5.193 5.421 9.064 1.00 17.01 ? 6 125 A N3 1 HETATM 118 C C4 . 125 A 1 6 ? 6.015 4.340 9.298 1.00 17.28 ? 6 125 A C4 1 HETATM 119 O O4 . 125 A 1 6 ? 5.801 3.603 10.244 1.00 15.39 ? 6 125 A O4 1 HETATM 120 C C5 . 125 A 1 6 ? 7.107 4.168 8.352 1.00 16.51 ? 6 125 A C5 1 HETATM 121 C C5M . 125 A 1 6 ? 8.060 3.043 8.580 1.00 16.67 ? 6 125 A C5M 1 HETATM 122 C C6 . 125 A 1 6 ? 7.213 5.046 7.332 1.00 16.79 ? 6 125 A C6 1 HETATM 123 C "CA'" . 125 A 1 6 ? 5.781 10.073 5.826 1.00 20.01 ? 6 125 A "CA'" 1 HETATM 124 C "CB'" . 125 A 1 6 ? 5.777 11.265 4.899 1.00 26.88 ? 6 125 A "CB'" 1 HETATM 125 F "FC'" . 125 A 1 6 ? 6.578 12.271 5.482 1.00 29.00 ? 6 125 A "FC'" 1 ATOM 126 P P . DA A 1 7 ? 10.536 9.344 7.359 1.00 22.73 ? 7 DA A P 1 ATOM 127 O OP1 . DA A 1 7 ? 11.495 10.373 6.899 1.00 23.94 ? 7 DA A OP1 1 ATOM 128 O OP2 . DA A 1 7 ? 11.027 8.112 8.020 1.00 21.77 ? 7 DA A OP2 1 ATOM 129 O "O5'" . DA A 1 7 ? 9.521 10.067 8.354 1.00 19.64 ? 7 DA A "O5'" 1 ATOM 130 C "C5'" . DA A 1 7 ? 8.887 11.304 7.974 1.00 19.81 ? 7 DA A "C5'" 1 ATOM 131 C "C4'" . DA A 1 7 ? 7.913 11.745 9.038 1.00 19.03 ? 7 DA A "C4'" 1 ATOM 132 O "O4'" . DA A 1 7 ? 6.755 10.869 9.015 1.00 19.65 ? 7 DA A "O4'" 1 ATOM 133 C "C3'" . DA A 1 7 ? 8.430 11.681 10.479 1.00 20.49 ? 7 DA A "C3'" 1 ATOM 134 O "O3'" . DA A 1 7 ? 9.188 12.845 10.850 1.00 22.41 ? 7 DA A "O3'" 1 ATOM 135 C "C2'" . DA A 1 7 ? 7.141 11.583 11.265 1.00 19.57 ? 7 DA A "C2'" 1 ATOM 136 C "C1'" . DA A 1 7 ? 6.263 10.713 10.359 1.00 19.10 ? 7 DA A "C1'" 1 ATOM 137 N N9 . DA A 1 7 ? 6.416 9.306 10.739 1.00 18.09 ? 7 DA A N9 1 ATOM 138 C C8 . DA A 1 7 ? 7.328 8.367 10.292 1.00 18.18 ? 7 DA A C8 1 ATOM 139 N N7 . DA A 1 7 ? 7.218 7.203 10.896 1.00 16.57 ? 7 DA A N7 1 ATOM 140 C C5 . DA A 1 7 ? 6.153 7.387 11.772 1.00 15.76 ? 7 DA A C5 1 ATOM 141 C C6 . DA A 1 7 ? 5.530 6.524 12.706 1.00 15.77 ? 7 DA A C6 1 ATOM 142 N N6 . DA A 1 7 ? 5.880 5.242 12.871 1.00 15.83 ? 7 DA A N6 1 ATOM 143 N N1 . DA A 1 7 ? 4.529 7.028 13.459 1.00 14.82 ? 7 DA A N1 1 ATOM 144 C C2 . DA A 1 7 ? 4.166 8.309 13.270 1.00 16.27 ? 7 DA A C2 1 ATOM 145 N N3 . DA A 1 7 ? 4.658 9.203 12.406 1.00 17.49 ? 7 DA A N3 1 ATOM 146 C C4 . DA A 1 7 ? 5.660 8.670 11.688 1.00 17.19 ? 7 DA A C4 1 ATOM 147 P P . DC A 1 8 ? 10.216 12.758 12.083 1.00 23.31 ? 8 DC A P 1 ATOM 148 O OP1 . DC A 1 8 ? 10.892 14.091 12.101 1.00 22.81 ? 8 DC A OP1 1 ATOM 149 O OP2 . DC A 1 8 ? 10.987 11.518 11.944 1.00 24.06 ? 8 DC A OP2 1 ATOM 150 O "O5'" . DC A 1 8 ? 9.284 12.653 13.367 1.00 23.52 ? 8 DC A "O5'" 1 ATOM 151 C "C5'" . DC A 1 8 ? 8.471 13.756 13.746 1.00 20.41 ? 8 DC A "C5'" 1 ATOM 152 C "C4'" . DC A 1 8 ? 7.521 13.360 14.848 1.00 18.65 ? 8 DC A "C4'" 1 ATOM 153 O "O4'" . DC A 1 8 ? 6.717 12.243 14.413 1.00 19.04 ? 8 DC A "O4'" 1 ATOM 154 C "C3'" . DC A 1 8 ? 8.148 12.869 16.147 1.00 18.90 ? 8 DC A "C3'" 1 ATOM 155 O "O3'" . DC A 1 8 ? 8.593 13.935 16.970 1.00 22.63 ? 8 DC A "O3'" 1 ATOM 156 C "C2'" . DC A 1 8 ? 6.997 12.084 16.757 1.00 18.74 ? 8 DC A "C2'" 1 ATOM 157 C "C1'" . DC A 1 8 ? 6.379 11.427 15.528 1.00 18.31 ? 8 DC A "C1'" 1 ATOM 158 N N1 . DC A 1 8 ? 6.904 10.065 15.287 1.00 18.75 ? 8 DC A N1 1 ATOM 159 C C2 . DC A 1 8 ? 6.346 9.020 16.010 1.00 15.24 ? 8 DC A C2 1 ATOM 160 O O2 . DC A 1 8 ? 5.392 9.277 16.779 1.00 17.90 ? 8 DC A O2 1 ATOM 161 N N3 . DC A 1 8 ? 6.856 7.760 15.869 1.00 17.59 ? 8 DC A N3 1 ATOM 162 C C4 . DC A 1 8 ? 7.880 7.545 15.034 1.00 16.69 ? 8 DC A C4 1 ATOM 163 N N4 . DC A 1 8 ? 8.367 6.291 14.929 1.00 16.14 ? 8 DC A N4 1 ATOM 164 C C5 . DC A 1 8 ? 8.453 8.601 14.263 1.00 17.41 ? 8 DC A C5 1 ATOM 165 C C6 . DC A 1 8 ? 7.935 9.829 14.415 1.00 16.65 ? 8 DC A C6 1 ATOM 166 P P . DG A 1 9 ? 9.731 13.663 18.072 1.00 23.68 ? 9 DG A P 1 ATOM 167 O OP1 . DG A 1 9 ? 10.070 14.983 18.639 1.00 26.15 ? 9 DG A OP1 1 ATOM 168 O OP2 . DG A 1 9 ? 10.788 12.814 17.484 1.00 26.55 ? 9 DG A OP2 1 ATOM 169 O "O5'" . DG A 1 9 ? 8.979 12.780 19.164 1.00 21.91 ? 9 DG A "O5'" 1 ATOM 170 C "C5'" . DG A 1 9 ? 7.906 13.310 19.921 1.00 19.82 ? 9 DG A "C5'" 1 ATOM 171 C "C4'" . DG A 1 9 ? 7.417 12.277 20.908 1.00 19.16 ? 9 DG A "C4'" 1 ATOM 172 O "O4'" . DG A 1 9 ? 6.828 11.157 20.212 1.00 20.42 ? 9 DG A "O4'" 1 ATOM 173 C "C3'" . DG A 1 9 ? 8.528 11.646 21.741 1.00 19.29 ? 9 DG A "C3'" 1 ATOM 174 O "O3'" . DG A 1 9 ? 8.830 12.419 22.880 1.00 21.88 ? 9 DG A "O3'" 1 ATOM 175 C "C2'" . DG A 1 9 ? 7.912 10.330 22.158 1.00 18.64 ? 9 DG A "C2'" 1 ATOM 176 C "C1'" . DG A 1 9 ? 7.093 9.949 20.933 1.00 18.48 ? 9 DG A "C1'" 1 ATOM 177 N N9 . DG A 1 9 ? 7.808 9.028 20.057 1.00 18.21 ? 9 DG A N9 1 ATOM 178 C C8 . DG A 1 9 ? 8.529 9.316 18.924 1.00 18.27 ? 9 DG A C8 1 ATOM 179 N N7 . DG A 1 9 ? 9.086 8.268 18.388 1.00 18.76 ? 9 DG A N7 1 ATOM 180 C C5 . DG A 1 9 ? 8.705 7.218 19.212 1.00 18.59 ? 9 DG A C5 1 ATOM 181 C C6 . DG A 1 9 ? 9.013 5.820 19.141 1.00 17.51 ? 9 DG A C6 1 ATOM 182 O O6 . DG A 1 9 ? 9.687 5.208 18.285 1.00 17.91 ? 9 DG A O6 1 ATOM 183 N N1 . DG A 1 9 ? 8.447 5.127 20.206 1.00 18.76 ? 9 DG A N1 1 ATOM 184 C C2 . DG A 1 9 ? 7.686 5.690 21.198 1.00 18.01 ? 9 DG A C2 1 ATOM 185 N N2 . DG A 1 9 ? 7.259 4.872 22.181 1.00 18.83 ? 9 DG A N2 1 ATOM 186 N N3 . DG A 1 9 ? 7.364 6.986 21.246 1.00 17.45 ? 9 DG A N3 1 ATOM 187 C C4 . DG A 1 9 ? 7.910 7.673 20.241 1.00 17.51 ? 9 DG A C4 1 ATOM 188 P P . DC A 1 10 ? 10.238 12.219 23.585 1.00 21.75 ? 10 DC A P 1 ATOM 189 O OP1 . DC A 1 10 ? 10.205 13.224 24.684 1.00 25.08 ? 10 DC A OP1 1 ATOM 190 O OP2 . DC A 1 10 ? 11.335 12.207 22.578 1.00 24.59 ? 10 DC A OP2 1 ATOM 191 O "O5'" . DC A 1 10 ? 10.178 10.742 24.201 1.00 20.58 ? 10 DC A "O5'" 1 ATOM 192 C "C5'" . DC A 1 10 ? 9.342 10.438 25.343 1.00 18.39 ? 10 DC A "C5'" 1 ATOM 193 C "C4'" . DC A 1 10 ? 9.526 9.000 25.792 1.00 18.90 ? 10 DC A "C4'" 1 ATOM 194 O "O4'" . DC A 1 10 ? 9.070 8.067 24.790 1.00 19.37 ? 10 DC A "O4'" 1 ATOM 195 C "C3'" . DC A 1 10 ? 10.953 8.553 26.117 1.00 19.00 ? 10 DC A "C3'" 1 ATOM 196 O "O3'" . DC A 1 10 ? 11.339 8.881 27.451 1.00 17.81 ? 10 DC A "O3'" 1 ATOM 197 C "C2'" . DC A 1 10 ? 10.866 7.040 25.969 1.00 16.99 ? 10 DC A "C2'" 1 ATOM 198 C "C1'" . DC A 1 10 ? 9.832 6.857 24.864 1.00 20.21 ? 10 DC A "C1'" 1 ATOM 199 N N1 . DC A 1 10 ? 10.478 6.638 23.564 1.00 21.25 ? 10 DC A N1 1 ATOM 200 C C2 . DC A 1 10 ? 10.841 5.327 23.226 1.00 21.53 ? 10 DC A C2 1 ATOM 201 O O2 . DC A 1 10 ? 10.579 4.395 24.039 1.00 19.47 ? 10 DC A O2 1 ATOM 202 N N3 . DC A 1 10 ? 11.454 5.100 22.051 1.00 20.38 ? 10 DC A N3 1 ATOM 203 C C4 . DC A 1 10 ? 11.712 6.115 21.222 1.00 19.49 ? 10 DC A C4 1 ATOM 204 N N4 . DC A 1 10 ? 12.342 5.836 20.062 1.00 21.74 ? 10 DC A N4 1 ATOM 205 C C5 . DC A 1 10 ? 11.346 7.460 21.535 1.00 20.52 ? 10 DC A C5 1 ATOM 206 C C6 . DC A 1 10 ? 10.736 7.673 22.707 1.00 20.87 ? 10 DC A C6 1 ATOM 207 O "O5'" . DG B 1 1 ? 12.579 -4.021 17.560 1.00 36.07 ? 11 DG B "O5'" 1 ATOM 208 C "C5'" . DG B 1 1 ? 12.698 -5.141 18.462 1.00 34.03 ? 11 DG B "C5'" 1 ATOM 209 C "C4'" . DG B 1 1 ? 12.333 -4.719 19.864 1.00 29.93 ? 11 DG B "C4'" 1 ATOM 210 O "O4'" . DG B 1 1 ? 13.302 -3.763 20.348 1.00 29.05 ? 11 DG B "O4'" 1 ATOM 211 C "C3'" . DG B 1 1 ? 10.990 -4.012 19.960 1.00 31.06 ? 11 DG B "C3'" 1 ATOM 212 O "O3'" . DG B 1 1 ? 9.915 -4.957 20.108 1.00 28.38 ? 11 DG B "O3'" 1 ATOM 213 C "C2'" . DG B 1 1 ? 11.168 -3.115 21.175 1.00 28.57 ? 11 DG B "C2'" 1 ATOM 214 C "C1'" . DG B 1 1 ? 12.649 -2.745 21.106 1.00 28.62 ? 11 DG B "C1'" 1 ATOM 215 N N9 . DG B 1 1 ? 12.904 -1.459 20.454 1.00 25.92 ? 11 DG B N9 1 ATOM 216 C C8 . DG B 1 1 ? 13.557 -1.226 19.265 1.00 25.98 ? 11 DG B C8 1 ATOM 217 N N7 . DG B 1 1 ? 13.636 0.052 18.971 1.00 25.58 ? 11 DG B N7 1 ATOM 218 C C5 . DG B 1 1 ? 13.002 0.690 20.030 1.00 24.04 ? 11 DG B C5 1 ATOM 219 C C6 . DG B 1 1 ? 12.772 2.086 20.276 1.00 23.51 ? 11 DG B C6 1 ATOM 220 O O6 . DG B 1 1 ? 13.133 3.047 19.603 1.00 23.32 ? 11 DG B O6 1 ATOM 221 N N1 . DG B 1 1 ? 12.046 2.288 21.450 1.00 21.96 ? 11 DG B N1 1 ATOM 222 C C2 . DG B 1 1 ? 11.627 1.285 22.288 1.00 21.20 ? 11 DG B C2 1 ATOM 223 N N2 . DG B 1 1 ? 10.960 1.654 23.392 1.00 20.71 ? 11 DG B N2 1 ATOM 224 N N3 . DG B 1 1 ? 11.851 -0.002 22.072 1.00 22.96 ? 11 DG B N3 1 ATOM 225 C C4 . DG B 1 1 ? 12.531 -0.223 20.939 1.00 23.77 ? 11 DG B C4 1 ATOM 226 P P . DC B 1 2 ? 8.454 -4.573 19.591 1.00 32.66 ? 12 DC B P 1 ATOM 227 O OP1 . DC B 1 2 ? 7.517 -5.738 19.687 1.00 32.45 ? 12 DC B OP1 1 ATOM 228 O OP2 . DC B 1 2 ? 8.591 -3.851 18.309 1.00 32.41 ? 12 DC B OP2 1 ATOM 229 O "O5'" . DC B 1 2 ? 7.898 -3.530 20.668 1.00 28.47 ? 12 DC B "O5'" 1 ATOM 230 C "C5'" . DC B 1 2 ? 7.688 -3.906 22.041 1.00 26.17 ? 12 DC B "C5'" 1 ATOM 231 C "C4'" . DC B 1 2 ? 7.304 -2.687 22.847 1.00 22.98 ? 12 DC B "C4'" 1 ATOM 232 O "O4'" . DC B 1 2 ? 8.413 -1.756 22.814 1.00 24.64 ? 12 DC B "O4'" 1 ATOM 233 C "C3'" . DC B 1 2 ? 6.132 -1.903 22.289 1.00 25.01 ? 12 DC B "C3'" 1 ATOM 234 O "O3'" . DC B 1 2 ? 4.851 -2.468 22.628 1.00 26.52 ? 12 DC B "O3'" 1 ATOM 235 C "C2'" . DC B 1 2 ? 6.393 -0.509 22.828 1.00 20.47 ? 12 DC B "C2'" 1 ATOM 236 C "C1'" . DC B 1 2 ? 7.911 -0.415 22.762 1.00 21.34 ? 12 DC B "C1'" 1 ATOM 237 N N1 . DC B 1 2 ? 8.422 0.229 21.517 1.00 22.91 ? 12 DC B N1 1 ATOM 238 C C2 . DC B 1 2 ? 8.395 1.625 21.448 1.00 21.65 ? 12 DC B C2 1 ATOM 239 O O2 . DC B 1 2 ? 7.880 2.251 22.394 1.00 20.09 ? 12 DC B O2 1 ATOM 240 N N3 . DC B 1 2 ? 8.892 2.256 20.353 1.00 20.66 ? 12 DC B N3 1 ATOM 241 C C4 . DC B 1 2 ? 9.364 1.550 19.335 1.00 21.90 ? 12 DC B C4 1 ATOM 242 N N4 . DC B 1 2 ? 9.847 2.228 18.270 1.00 18.45 ? 12 DC B N4 1 ATOM 243 C C5 . DC B 1 2 ? 9.372 0.115 19.354 1.00 22.75 ? 12 DC B C5 1 ATOM 244 C C6 . DC B 1 2 ? 8.900 -0.498 20.465 1.00 21.75 ? 12 DC B C6 1 ATOM 245 P P . DG B 1 3 ? 3.666 -2.401 21.544 1.00 32.25 ? 13 DG B P 1 ATOM 246 O OP1 . DG B 1 3 ? 2.403 -3.011 22.055 1.00 34.16 ? 13 DG B OP1 1 ATOM 247 O OP2 . DG B 1 3 ? 4.203 -2.823 20.215 1.00 30.66 ? 13 DG B OP2 1 ATOM 248 O "O5'" . DG B 1 3 ? 3.342 -0.847 21.442 1.00 28.10 ? 13 DG B "O5'" 1 ATOM 249 C "C5'" . DG B 1 3 ? 2.825 -0.187 22.574 1.00 26.89 ? 13 DG B "C5'" 1 ATOM 250 C "C4'" . DG B 1 3 ? 2.821 1.304 22.368 1.00 24.33 ? 13 DG B "C4'" 1 ATOM 251 O "O4'" . DG B 1 3 ? 4.155 1.811 22.144 1.00 23.98 ? 13 DG B "O4'" 1 ATOM 252 C "C3'" . DG B 1 3 ? 2.032 1.815 21.180 1.00 22.57 ? 13 DG B "C3'" 1 ATOM 253 O "O3'" . DG B 1 3 ? 0.635 1.775 21.448 1.00 23.46 ? 13 DG B "O3'" 1 ATOM 254 C "C2'" . DG B 1 3 ? 2.573 3.228 21.070 1.00 23.50 ? 13 DG B "C2'" 1 ATOM 255 C "C1'" . DG B 1 3 ? 4.044 3.039 21.429 1.00 22.48 ? 13 DG B "C1'" 1 ATOM 256 N N9 . DG B 1 3 ? 4.880 2.973 20.233 1.00 22.88 ? 13 DG B N9 1 ATOM 257 C C8 . DG B 1 3 ? 5.517 1.901 19.660 1.00 22.44 ? 13 DG B C8 1 ATOM 258 N N7 . DG B 1 3 ? 6.167 2.217 18.569 1.00 20.66 ? 13 DG B N7 1 ATOM 259 C C5 . DG B 1 3 ? 5.954 3.581 18.427 1.00 20.44 ? 13 DG B C5 1 ATOM 260 C C6 . DG B 1 3 ? 6.417 4.488 17.438 1.00 19.95 ? 13 DG B C6 1 ATOM 261 O O6 . DG B 1 3 ? 7.114 4.257 16.460 1.00 18.94 ? 13 DG B O6 1 ATOM 262 N N1 . DG B 1 3 ? 5.978 5.773 17.688 1.00 17.73 ? 13 DG B N1 1 ATOM 263 C C2 . DG B 1 3 ? 5.185 6.150 18.734 1.00 18.98 ? 13 DG B C2 1 ATOM 264 N N2 . DG B 1 3 ? 4.846 7.475 18.804 1.00 18.14 ? 13 DG B N2 1 ATOM 265 N N3 . DG B 1 3 ? 4.741 5.313 19.656 1.00 20.61 ? 13 DG B N3 1 ATOM 266 C C4 . DG B 1 3 ? 5.166 4.060 19.439 1.00 21.79 ? 13 DG B C4 1 ATOM 267 P P . DT B 1 4 ? -0.404 1.773 20.226 1.00 26.42 ? 14 DT B P 1 ATOM 268 O OP1 . DT B 1 4 ? -1.778 1.640 20.785 1.00 28.28 ? 14 DT B OP1 1 ATOM 269 O OP2 . DT B 1 4 ? 0.083 0.827 19.185 1.00 23.56 ? 14 DT B OP2 1 ATOM 270 O "O5'" . DT B 1 4 ? -0.352 3.248 19.632 1.00 23.86 ? 14 DT B "O5'" 1 ATOM 271 C "C5'" . DT B 1 4 ? -0.775 4.376 20.414 1.00 24.04 ? 14 DT B "C5'" 1 ATOM 272 C "C4'" . DT B 1 4 ? -0.586 5.668 19.649 1.00 23.41 ? 14 DT B "C4'" 1 ATOM 273 O "O4'" . DT B 1 4 ? 0.819 5.962 19.479 1.00 20.87 ? 14 DT B "O4'" 1 ATOM 274 C "C3'" . DT B 1 4 ? -1.132 5.682 18.230 1.00 22.47 ? 14 DT B "C3'" 1 ATOM 275 O "O3'" . DT B 1 4 ? -2.539 5.896 18.163 1.00 23.66 ? 14 DT B "O3'" 1 ATOM 276 C "C2'" . DT B 1 4 ? -0.346 6.812 17.590 1.00 17.74 ? 14 DT B "C2'" 1 ATOM 277 C "C1'" . DT B 1 4 ? 1.024 6.647 18.239 1.00 18.62 ? 14 DT B "C1'" 1 ATOM 278 N N1 . DT B 1 4 ? 1.880 5.805 17.375 1.00 17.96 ? 14 DT B N1 1 ATOM 279 C C2 . DT B 1 4 ? 2.524 6.475 16.351 1.00 17.21 ? 14 DT B C2 1 ATOM 280 O O2 . DT B 1 4 ? 2.375 7.660 16.181 1.00 17.05 ? 14 DT B O2 1 ATOM 281 N N3 . DT B 1 4 ? 3.328 5.693 15.542 1.00 18.01 ? 14 DT B N3 1 ATOM 282 C C4 . DT B 1 4 ? 3.520 4.319 15.652 1.00 18.04 ? 14 DT B C4 1 ATOM 283 O O4 . DT B 1 4 ? 4.263 3.736 14.863 1.00 19.16 ? 14 DT B O4 1 ATOM 284 C C5 . DT B 1 4 ? 2.782 3.670 16.743 1.00 17.14 ? 14 DT B C5 1 ATOM 285 C C7 . DT B 1 4 ? 2.909 2.190 16.917 1.00 20.08 ? 14 DT B C7 1 ATOM 286 C C6 . DT B 1 4 ? 2.023 4.437 17.541 1.00 18.96 ? 14 DT B C6 1 ATOM 287 P P . DA B 1 5 ? -3.356 5.267 16.943 1.00 28.29 ? 15 DA B P 1 ATOM 288 O OP1 . DA B 1 5 ? -4.809 5.497 17.262 1.00 30.39 ? 15 DA B OP1 1 ATOM 289 O OP2 . DA B 1 5 ? -2.893 3.913 16.584 1.00 24.78 ? 15 DA B OP2 1 ATOM 290 O "O5'" . DA B 1 5 ? -2.999 6.214 15.708 1.00 24.53 ? 15 DA B "O5'" 1 ATOM 291 C "C5'" . DA B 1 5 ? -3.207 7.614 15.812 1.00 25.05 ? 15 DA B "C5'" 1 ATOM 292 C "C4'" . DA B 1 5 ? -2.581 8.329 14.640 1.00 23.13 ? 15 DA B "C4'" 1 ATOM 293 O "O4'" . DA B 1 5 ? -1.145 8.252 14.743 1.00 20.87 ? 15 DA B "O4'" 1 ATOM 294 C "C3'" . DA B 1 5 ? -2.911 7.806 13.249 1.00 22.07 ? 15 DA B "C3'" 1 ATOM 295 O "O3'" . DA B 1 5 ? -4.176 8.294 12.782 1.00 22.92 ? 15 DA B "O3'" 1 ATOM 296 C "C2'" . DA B 1 5 ? -1.750 8.347 12.438 1.00 20.81 ? 15 DA B "C2'" 1 ATOM 297 C "C1'" . DA B 1 5 ? -0.590 8.225 13.430 1.00 18.91 ? 15 DA B "C1'" 1 ATOM 298 N N9 . DA B 1 5 ? 0.124 6.959 13.283 1.00 17.84 ? 15 DA B N9 1 ATOM 299 C C8 . DA B 1 5 ? 0.019 5.794 14.001 1.00 16.31 ? 15 DA B C8 1 ATOM 300 N N7 . DA B 1 5 ? 0.826 4.836 13.570 1.00 16.25 ? 15 DA B N7 1 ATOM 301 C C5 . DA B 1 5 ? 1.515 5.436 12.523 1.00 15.00 ? 15 DA B C5 1 ATOM 302 C C6 . DA B 1 5 ? 2.521 4.979 11.678 1.00 15.67 ? 15 DA B C6 1 ATOM 303 N N6 . DA B 1 5 ? 3.100 3.764 11.796 1.00 14.76 ? 15 DA B N6 1 ATOM 304 N N1 . DA B 1 5 ? 2.952 5.826 10.700 1.00 14.94 ? 15 DA B N1 1 ATOM 305 C C2 . DA B 1 5 ? 2.432 7.066 10.639 1.00 14.29 ? 15 DA B C2 1 ATOM 306 N N3 . DA B 1 5 ? 1.506 7.617 11.400 1.00 17.27 ? 15 DA B N3 1 ATOM 307 C C4 . DA B 1 5 ? 1.079 6.734 12.329 1.00 16.90 ? 15 DA B C4 1 HETATM 308 P P . 125 B 1 6 ? -4.972 7.494 11.621 1.00 21.40 ? 16 125 B P 1 HETATM 309 O OP1 . 125 B 1 6 ? -6.347 8.091 11.642 1.00 24.16 ? 16 125 B OP1 1 HETATM 310 O OP2 . 125 B 1 6 ? -4.819 6.039 11.788 1.00 21.31 ? 16 125 B OP2 1 HETATM 311 O "O5'" . 125 B 1 6 ? -4.240 7.891 10.288 1.00 20.42 ? 16 125 B "O5'" 1 HETATM 312 C "C5'" . 125 B 1 6 ? -4.223 9.225 9.829 1.00 16.49 ? 16 125 B "C5'" 1 HETATM 313 C "C4'" . 125 B 1 6 ? -3.372 9.306 8.602 1.00 21.33 ? 16 125 B "C4'" 1 HETATM 314 O "O4'" . 125 B 1 6 ? -1.974 9.112 8.962 1.00 20.26 ? 16 125 B "O4'" 1 HETATM 315 C "C3'" . 125 B 1 6 ? -3.620 8.222 7.562 1.00 20.83 ? 16 125 B "C3'" 1 HETATM 316 O "O3'" . 125 B 1 6 ? -4.777 8.438 6.758 1.00 24.26 ? 16 125 B "O3'" 1 HETATM 317 C "C2'" . 125 B 1 6 ? -2.326 8.253 6.768 1.00 20.16 ? 16 125 B "C2'" 1 HETATM 318 O "O2'" . 125 B 1 6 ? -2.326 9.454 5.984 1.00 22.82 ? 16 125 B "O2'" 1 HETATM 319 C "C1'" . 125 B 1 6 ? -1.306 8.450 7.895 1.00 19.72 ? 16 125 B "C1'" 1 HETATM 320 N N1 . 125 B 1 6 ? -0.841 7.130 8.377 1.00 17.55 ? 16 125 B N1 1 HETATM 321 C C2 . 125 B 1 6 ? 0.221 6.566 7.702 1.00 18.11 ? 16 125 B C2 1 HETATM 322 O O2 . 125 B 1 6 ? 0.752 7.105 6.746 1.00 18.21 ? 16 125 B O2 1 HETATM 323 N N3 . 125 B 1 6 ? 0.616 5.338 8.185 1.00 16.34 ? 16 125 B N3 1 HETATM 324 C C4 . 125 B 1 6 ? 0.065 4.642 9.244 1.00 17.58 ? 16 125 B C4 1 HETATM 325 O O4 . 125 B 1 6 ? 0.523 3.551 9.576 1.00 16.77 ? 16 125 B O4 1 HETATM 326 C C5 . 125 B 1 6 ? -1.048 5.287 9.896 1.00 17.15 ? 16 125 B C5 1 HETATM 327 C C5M . 125 B 1 6 ? -1.691 4.605 11.059 1.00 17.94 ? 16 125 B C5M 1 HETATM 328 C C6 . 125 B 1 6 ? -1.445 6.484 9.430 1.00 17.08 ? 16 125 B C6 1 HETATM 329 C "CA'" . 125 B 1 6 ? -1.194 9.673 5.129 1.00 25.40 ? 16 125 B "CA'" 1 HETATM 330 C "CB'" . 125 B 1 6 ? -1.376 10.973 4.380 1.00 28.84 ? 16 125 B "CB'" 1 HETATM 331 F "FC'" . 125 B 1 6 ? -2.430 10.788 3.482 1.00 33.34 ? 16 125 B "FC'" 1 ATOM 332 P P . DA B 1 7 ? -5.602 7.175 6.170 1.00 22.99 ? 17 DA B P 1 ATOM 333 O OP1 . DA B 1 7 ? -6.822 7.772 5.516 1.00 27.14 ? 17 DA B OP1 1 ATOM 334 O OP2 . DA B 1 7 ? -5.762 6.031 7.082 1.00 21.05 ? 17 DA B OP2 1 ATOM 335 O "O5'" . DA B 1 7 ? -4.665 6.662 4.998 1.00 21.23 ? 17 DA B "O5'" 1 ATOM 336 C "C5'" . DA B 1 7 ? -4.418 7.473 3.836 1.00 21.83 ? 17 DA B "C5'" 1 ATOM 337 C "C4'" . DA B 1 7 ? -3.447 6.782 2.910 1.00 20.86 ? 17 DA B "C4'" 1 ATOM 338 O "O4'" . DA B 1 7 ? -2.136 6.686 3.527 1.00 23.62 ? 17 DA B "O4'" 1 ATOM 339 C "C3'" . DA B 1 7 ? -3.793 5.343 2.543 1.00 23.61 ? 17 DA B "C3'" 1 ATOM 340 O "O3'" . DA B 1 7 ? -4.763 5.228 1.485 1.00 25.64 ? 17 DA B "O3'" 1 ATOM 341 C "C2'" . DA B 1 7 ? -2.450 4.796 2.118 1.00 23.11 ? 17 DA B "C2'" 1 ATOM 342 C "C1'" . DA B 1 7 ? -1.484 5.502 3.069 1.00 23.57 ? 17 DA B "C1'" 1 ATOM 343 N N9 . DA B 1 7 ? -1.224 4.652 4.224 1.00 21.43 ? 17 DA B N9 1 ATOM 344 C C8 . DA B 1 7 ? -1.887 4.611 5.422 1.00 19.93 ? 17 DA B C8 1 ATOM 345 N N7 . DA B 1 7 ? -1.428 3.720 6.250 1.00 18.89 ? 17 DA B N7 1 ATOM 346 C C5 . DA B 1 7 ? -0.383 3.129 5.563 1.00 17.70 ? 17 DA B C5 1 ATOM 347 C C6 . DA B 1 7 ? 0.494 2.076 5.906 1.00 17.83 ? 17 DA B C6 1 ATOM 348 N N6 . DA B 1 7 ? 0.472 1.456 7.105 1.00 15.11 ? 17 DA B N6 1 ATOM 349 N N1 . DA B 1 7 ? 1.387 1.683 4.971 1.00 16.67 ? 17 DA B N1 1 ATOM 350 C C2 . DA B 1 7 ? 1.402 2.313 3.774 1.00 16.70 ? 17 DA B C2 1 ATOM 351 N N3 . DA B 1 7 ? 0.630 3.325 3.343 1.00 19.16 ? 17 DA B N3 1 ATOM 352 C C4 . DA B 1 7 ? -0.248 3.685 4.304 1.00 20.27 ? 17 DA B C4 1 ATOM 353 P P . DC B 1 8 ? -5.772 3.982 1.482 1.00 29.74 ? 18 DC B P 1 ATOM 354 O OP1 . DC B 1 8 ? -6.715 4.208 0.368 1.00 30.36 ? 18 DC B OP1 1 ATOM 355 O OP2 . DC B 1 8 ? -6.295 3.713 2.835 1.00 29.90 ? 18 DC B OP2 1 ATOM 356 O "O5'" . DC B 1 8 ? -4.883 2.720 1.082 1.00 26.17 ? 18 DC B "O5'" 1 ATOM 357 C "C5'" . DC B 1 8 ? -4.195 2.703 -0.164 1.00 26.42 ? 18 DC B "C5'" 1 ATOM 358 C "C4'" . DC B 1 8 ? -3.153 1.609 -0.184 1.00 26.62 ? 18 DC B "C4'" 1 ATOM 359 O "O4'" . DC B 1 8 ? -2.137 1.883 0.809 1.00 24.77 ? 18 DC B "O4'" 1 ATOM 360 C "C3'" . DC B 1 8 ? -3.627 0.198 0.134 1.00 26.90 ? 18 DC B "C3'" 1 ATOM 361 O "O3'" . DC B 1 8 ? -4.203 -0.478 -0.978 1.00 28.46 ? 18 DC B "O3'" 1 ATOM 362 C "C2'" . DC B 1 8 ? -2.333 -0.474 0.553 1.00 26.03 ? 18 DC B "C2'" 1 ATOM 363 C "C1'" . DC B 1 8 ? -1.614 0.645 1.291 1.00 24.13 ? 18 DC B "C1'" 1 ATOM 364 N N1 . DC B 1 8 ? -1.887 0.548 2.738 1.00 21.38 ? 18 DC B N1 1 ATOM 365 C C2 . DC B 1 8 ? -1.082 -0.309 3.478 1.00 20.07 ? 18 DC B C2 1 ATOM 366 O O2 . DC B 1 8 ? -0.173 -0.915 2.877 1.00 19.32 ? 18 DC B O2 1 ATOM 367 N N3 . DC B 1 8 ? -1.304 -0.461 4.812 1.00 19.27 ? 18 DC B N3 1 ATOM 368 C C4 . DC B 1 8 ? -2.284 0.214 5.407 1.00 19.93 ? 18 DC B C4 1 ATOM 369 N N4 . DC B 1 8 ? -2.480 0.010 6.730 1.00 18.33 ? 18 DC B N4 1 ATOM 370 C C5 . DC B 1 8 ? -3.121 1.119 4.675 1.00 20.02 ? 18 DC B C5 1 ATOM 371 C C6 . DC B 1 8 ? -2.893 1.250 3.350 1.00 20.73 ? 18 DC B C6 1 ATOM 372 P P . DG B 1 9 ? -5.207 -1.717 -0.713 1.00 28.39 ? 19 DG B P 1 ATOM 373 O OP1 . DG B 1 9 ? -5.821 -2.082 -2.004 1.00 32.48 ? 19 DG B OP1 1 ATOM 374 O OP2 . DG B 1 9 ? -6.069 -1.484 0.460 1.00 30.16 ? 19 DG B OP2 1 ATOM 375 O "O5'" . DG B 1 9 ? -4.286 -2.931 -0.247 1.00 27.68 ? 19 DG B "O5'" 1 ATOM 376 C "C5'" . DG B 1 9 ? -3.292 -3.470 -1.117 1.00 24.93 ? 19 DG B "C5'" 1 ATOM 377 C "C4'" . DG B 1 9 ? -2.381 -4.410 -0.360 1.00 21.01 ? 19 DG B "C4'" 1 ATOM 378 O "O4'" . DG B 1 9 ? -1.775 -3.715 0.757 1.00 20.81 ? 19 DG B "O4'" 1 ATOM 379 C "C3'" . DG B 1 9 ? -3.008 -5.659 0.260 1.00 21.80 ? 19 DG B "C3'" 1 ATOM 380 O "O3'" . DG B 1 9 ? -3.136 -6.704 -0.703 1.00 21.56 ? 19 DG B "O3'" 1 ATOM 381 C "C2'" . DG B 1 9 ? -1.990 -6.014 1.327 1.00 16.48 ? 19 DG B "C2'" 1 ATOM 382 C "C1'" . DG B 1 9 ? -1.519 -4.640 1.798 1.00 19.88 ? 19 DG B "C1'" 1 ATOM 383 N N9 . DG B 1 9 ? -2.192 -4.178 3.008 1.00 17.67 ? 19 DG B N9 1 ATOM 384 C C8 . DG B 1 9 ? -3.072 -3.133 3.182 1.00 20.71 ? 19 DG B C8 1 ATOM 385 N N7 . DG B 1 9 ? -3.428 -2.975 4.434 1.00 20.60 ? 19 DG B N7 1 ATOM 386 C C5 . DG B 1 9 ? -2.750 -3.998 5.109 1.00 18.90 ? 19 DG B C5 1 ATOM 387 C C6 . DG B 1 9 ? -2.713 -4.342 6.488 1.00 18.72 ? 19 DG B C6 1 ATOM 388 O O6 . DG B 1 9 ? -3.285 -3.805 7.436 1.00 17.71 ? 19 DG B O6 1 ATOM 389 N N1 . DG B 1 9 ? -1.889 -5.440 6.719 1.00 17.74 ? 19 DG B N1 1 ATOM 390 C C2 . DG B 1 9 ? -1.213 -6.136 5.755 1.00 17.73 ? 19 DG B C2 1 ATOM 391 N N2 . DG B 1 9 ? -0.518 -7.201 6.160 1.00 17.18 ? 19 DG B N2 1 ATOM 392 N N3 . DG B 1 9 ? -1.234 -5.823 4.484 1.00 15.49 ? 19 DG B N3 1 ATOM 393 C C4 . DG B 1 9 ? -2.009 -4.746 4.236 1.00 18.35 ? 19 DG B C4 1 ATOM 394 P P . DC B 1 10 ? -4.224 -7.882 -0.480 1.00 22.11 ? 20 DC B P 1 ATOM 395 O OP1 . DC B 1 10 ? -4.178 -8.699 -1.714 1.00 21.97 ? 20 DC B OP1 1 ATOM 396 O OP2 . DC B 1 10 ? -5.521 -7.344 0.020 1.00 22.00 ? 20 DC B OP2 1 ATOM 397 O "O5'" . DC B 1 10 ? -3.669 -8.778 0.719 1.00 20.13 ? 20 DC B "O5'" 1 ATOM 398 C "C5'" . DC B 1 10 ? -2.446 -9.549 0.608 1.00 16.70 ? 20 DC B "C5'" 1 ATOM 399 C "C4'" . DC B 1 10 ? -2.200 -10.323 1.884 1.00 17.55 ? 20 DC B "C4'" 1 ATOM 400 O "O4'" . DC B 1 10 ? -1.953 -9.387 2.957 1.00 17.99 ? 20 DC B "O4'" 1 ATOM 401 C "C3'" . DC B 1 10 ? -3.354 -11.186 2.386 1.00 18.02 ? 20 DC B "C3'" 1 ATOM 402 O "O3'" . DC B 1 10 ? -3.368 -12.508 1.809 1.00 24.44 ? 20 DC B "O3'" 1 ATOM 403 C "C2'" . DC B 1 10 ? -3.113 -11.248 3.880 1.00 17.55 ? 20 DC B "C2'" 1 ATOM 404 C "C1'" . DC B 1 10 ? -2.450 -9.904 4.190 1.00 17.20 ? 20 DC B "C1'" 1 ATOM 405 N N1 . DC B 1 10 ? -3.357 -8.886 4.767 1.00 15.66 ? 20 DC B N1 1 ATOM 406 C C2 . DC B 1 10 ? -3.547 -8.886 6.155 1.00 16.58 ? 20 DC B C2 1 ATOM 407 O O2 . DC B 1 10 ? -3.022 -9.800 6.822 1.00 18.72 ? 20 DC B O2 1 ATOM 408 N N3 . DC B 1 10 ? -4.285 -7.907 6.728 1.00 16.32 ? 20 DC B N3 1 ATOM 409 C C4 . DC B 1 10 ? -4.825 -6.951 5.960 1.00 16.49 ? 20 DC B C4 1 ATOM 410 N N4 . DC B 1 10 ? -5.482 -5.954 6.577 1.00 17.11 ? 20 DC B N4 1 ATOM 411 C C5 . DC B 1 10 ? -4.702 -6.961 4.531 1.00 18.12 ? 20 DC B C5 1 ATOM 412 C C6 . DC B 1 10 ? -3.968 -7.947 3.979 1.00 16.81 ? 20 DC B C6 1 HETATM 413 O O . HOH C 2 . ? 9.317 5.465 10.919 1.00 20.91 ? 102 HOH A O 1 HETATM 414 O O . HOH C 2 . ? 10.880 5.258 8.703 1.00 24.24 ? 103 HOH A O 1 HETATM 415 O O . HOH C 2 . ? 12.062 11.646 27.492 1.00 19.69 ? 105 HOH A O 1 HETATM 416 O O . HOH C 2 . ? 6.078 7.437 23.619 1.00 24.73 ? 106 HOH A O 1 HETATM 417 O O . HOH C 2 . ? 7.151 -11.290 10.485 1.00 26.95 ? 107 HOH A O 1 HETATM 418 O O . HOH C 2 . ? 7.233 -4.403 10.458 1.00 24.34 ? 108 HOH A O 1 HETATM 419 O O . HOH C 2 . ? 2.894 -0.181 10.103 1.00 39.98 ? 109 HOH A O 1 HETATM 420 O O . HOH C 2 . ? 4.279 7.820 3.681 1.00 30.49 ? 110 HOH A O 1 HETATM 421 O O . HOH C 2 . ? 8.170 -2.067 6.896 1.00 24.82 ? 111 HOH A O 1 HETATM 422 O O . HOH C 2 . ? 10.887 6.024 13.196 1.00 32.11 ? 113 HOH A O 1 HETATM 423 O O . HOH C 2 . ? 6.095 0.160 9.911 1.00 33.59 ? 114 HOH A O 1 HETATM 424 O O . HOH C 2 . ? 11.860 10.738 19.626 1.00 29.39 ? 115 HOH A O 1 HETATM 425 O O . HOH C 2 . ? 4.691 5.230 2.654 1.00 20.81 ? 120 HOH A O 1 HETATM 426 O O . HOH C 2 . ? 4.071 -8.346 17.355 1.00 36.87 ? 121 HOH A O 1 HETATM 427 O O . HOH C 2 . ? 1.321 -4.155 14.097 1.00 27.23 ? 122 HOH A O 1 HETATM 428 O O . HOH C 2 . ? 12.449 -1.237 6.504 1.00 40.93 ? 123 HOH A O 1 HETATM 429 O O . HOH C 2 . ? 0.743 -10.679 8.266 1.00 19.28 ? 124 HOH A O 1 HETATM 430 O O . HOH C 2 . ? -2.261 -4.129 15.531 1.00 40.02 ? 126 HOH A O 1 HETATM 431 O O . HOH C 2 . ? 11.150 5.087 16.195 1.00 37.45 ? 128 HOH A O 1 HETATM 432 O O . HOH C 2 . ? 3.589 9.769 8.232 1.00 24.92 ? 129 HOH A O 1 HETATM 433 O O . HOH C 2 . ? 4.226 -3.294 11.310 1.00 35.80 ? 130 HOH A O 1 HETATM 434 O O . HOH C 2 . ? 7.269 6.192 1.209 1.00 28.05 ? 133 HOH A O 1 HETATM 435 O O . HOH C 2 . ? 12.775 -0.285 2.317 1.00 33.29 ? 136 HOH A O 1 HETATM 436 O O . HOH C 2 . ? 1.900 10.363 6.006 1.00 29.14 ? 140 HOH A O 1 HETATM 437 O O . HOH C 2 . ? 11.703 10.191 14.533 1.00 32.71 ? 141 HOH A O 1 HETATM 438 O O . HOH C 2 . ? 10.969 0.667 7.619 1.00 32.55 ? 142 HOH A O 1 HETATM 439 O O . HOH C 2 . ? -2.277 -9.845 19.538 1.00 47.68 ? 143 HOH A O 1 HETATM 440 O O . HOH C 2 . ? 11.232 8.438 16.571 1.00 31.45 ? 144 HOH A O 1 HETATM 441 O O . HOH C 2 . ? 10.994 -4.985 1.378 1.00 43.73 ? 145 HOH A O 1 HETATM 442 O O . HOH C 2 . ? 9.132 -0.480 8.525 1.00 44.35 ? 146 HOH A O 1 HETATM 443 O O . HOH C 2 . ? 0.304 -2.617 11.752 1.00 30.16 ? 147 HOH A O 1 HETATM 444 O O . HOH C 2 . ? 6.811 -10.612 15.029 1.00 36.04 ? 148 HOH A O 1 HETATM 445 O O . HOH C 2 . ? 12.910 12.971 25.341 1.00 37.85 ? 150 HOH A O 1 HETATM 446 O O . HOH C 2 . ? -0.135 -8.246 19.514 1.00 29.19 ? 151 HOH A O 1 HETATM 447 O O . HOH C 2 . ? 10.195 17.012 20.867 1.00 43.92 ? 152 HOH A O 1 HETATM 448 O O . HOH C 2 . ? 3.194 -5.583 12.327 1.00 28.33 ? 154 HOH A O 1 HETATM 449 O O . HOH C 2 . ? 8.474 3.219 12.284 1.00 29.29 ? 157 HOH A O 1 HETATM 450 O O . HOH C 2 . ? 12.967 8.078 18.321 1.00 35.35 ? 158 HOH A O 1 HETATM 451 O O . HOH C 2 . ? 5.061 -11.142 6.503 1.00 36.96 ? 159 HOH A O 1 HETATM 452 O O . HOH C 2 . ? 11.260 8.917 10.965 1.00 37.86 ? 163 HOH A O 1 HETATM 453 O O . HOH C 2 . ? 15.989 12.489 21.715 1.00 36.25 ? 164 HOH A O 1 HETATM 454 O O . HOH C 2 . ? 5.887 11.853 25.426 1.00 45.54 ? 165 HOH A O 1 HETATM 455 O O . HOH C 2 . ? 15.078 11.210 17.114 1.00 36.89 ? 166 HOH A O 1 HETATM 456 O O . HOH C 2 . ? 6.334 9.471 27.221 1.00 39.81 ? 167 HOH A O 1 HETATM 457 O O . HOH C 2 . ? 3.012 -10.193 6.770 1.00 37.44 ? 172 HOH A O 1 HETATM 458 O O . HOH C 2 . ? 11.404 -3.531 8.754 1.00 55.57 ? 175 HOH A O 1 HETATM 459 O O . HOH C 2 . ? 15.321 8.541 15.212 0.50 42.14 ? 179 HOH A O 1 HETATM 460 O O . HOH C 2 . ? -2.286 -6.039 20.862 0.50 24.81 ? 181 HOH A O 1 HETATM 461 O O . HOH C 2 . ? 13.133 13.989 21.442 0.50 37.69 ? 183 HOH A O 1 HETATM 462 O O . HOH C 2 . ? 9.082 10.793 3.802 0.50 23.95 ? 184 HOH A O 1 HETATM 463 O O . HOH C 2 . ? 9.865 13.439 4.519 0.50 41.90 ? 185 HOH A O 1 HETATM 464 O O . HOH C 2 . ? 13.005 4.180 10.532 0.50 28.52 ? 187 HOH A O 1 HETATM 465 O O . HOH C 2 . ? 7.896 10.167 1.803 0.50 34.39 ? 188 HOH A O 1 HETATM 466 O O . HOH C 2 . ? 6.832 1.522 11.826 0.50 18.95 ? 189 HOH A O 1 HETATM 467 O O A HOH C 2 . ? -0.810 -0.778 10.595 0.50 22.28 ? 190 HOH A O 1 HETATM 468 O O B HOH C 2 . ? -0.184 1.278 10.878 0.50 28.17 ? 190 HOH A O 1 HETATM 469 O O . HOH C 2 . ? 9.211 15.587 7.916 0.50 32.05 ? 191 HOH A O 1 HETATM 470 O O . HOH C 2 . ? 5.501 9.215 25.052 0.50 44.16 ? 195 HOH A O 1 HETATM 471 O O . HOH C 2 . ? 3.041 -8.324 20.699 0.50 32.85 ? 199 HOH A O 1 HETATM 472 O O . HOH C 2 . ? 7.870 14.499 6.372 0.50 35.03 ? 200 HOH A O 1 HETATM 473 O O A HOH C 2 . ? 11.800 -6.071 4.728 0.50 31.10 ? 201 HOH A O 1 HETATM 474 O O B HOH C 2 . ? 11.134 -4.627 5.689 0.50 33.08 ? 201 HOH A O 1 HETATM 475 O O . HOH D 2 . ? -3.149 2.800 8.407 1.00 25.67 ? 101 HOH B O 1 HETATM 476 O O . HOH D 2 . ? 1.174 10.106 15.846 1.00 24.57 ? 104 HOH B O 1 HETATM 477 O O . HOH D 2 . ? -5.817 -1.698 5.354 1.00 26.88 ? 112 HOH B O 1 HETATM 478 O O . HOH D 2 . ? 2.054 5.096 1.389 1.00 23.56 ? 116 HOH B O 1 HETATM 479 O O . HOH D 2 . ? -4.603 11.333 5.727 1.00 33.93 ? 117 HOH B O 1 HETATM 480 O O . HOH D 2 . ? -0.816 1.852 16.530 1.00 33.18 ? 118 HOH B O 1 HETATM 481 O O . HOH D 2 . ? 5.515 1.417 14.377 1.00 32.51 ? 119 HOH B O 1 HETATM 482 O O . HOH D 2 . ? 1.887 -1.390 17.919 1.00 38.28 ? 125 HOH B O 1 HETATM 483 O O . HOH D 2 . ? -4.004 -5.829 -4.297 1.00 45.43 ? 127 HOH B O 1 HETATM 484 O O . HOH D 2 . ? -6.261 -5.197 1.841 1.00 36.07 ? 131 HOH B O 1 HETATM 485 O O . HOH D 2 . ? 9.259 2.974 14.968 1.00 30.09 ? 132 HOH B O 1 HETATM 486 O O . HOH D 2 . ? -2.363 1.864 23.517 1.00 46.74 ? 134 HOH B O 1 HETATM 487 O O . HOH D 2 . ? -8.305 9.474 7.874 1.00 45.50 ? 135 HOH B O 1 HETATM 488 O O . HOH D 2 . ? 0.680 1.986 14.130 1.00 34.00 ? 137 HOH B O 1 HETATM 489 O O . HOH D 2 . ? -4.976 4.585 9.214 1.00 30.29 ? 138 HOH B O 1 HETATM 490 O O . HOH D 2 . ? -7.223 -4.060 5.048 1.00 34.14 ? 139 HOH B O 1 HETATM 491 O O . HOH D 2 . ? 3.965 6.237 22.154 1.00 32.13 ? 149 HOH B O 1 HETATM 492 O O . HOH D 2 . ? -1.631 10.096 0.775 1.00 45.63 ? 153 HOH B O 1 HETATM 493 O O . HOH D 2 . ? 1.555 10.036 10.141 1.00 31.17 ? 155 HOH B O 1 HETATM 494 O O . HOH D 2 . ? 13.746 0.755 16.187 1.00 45.17 ? 156 HOH B O 1 HETATM 495 O O . HOH D 2 . ? 13.349 3.416 16.584 1.00 47.68 ? 160 HOH B O 1 HETATM 496 O O . HOH D 2 . ? -5.759 3.427 5.609 1.00 37.69 ? 161 HOH B O 1 HETATM 497 O O . HOH D 2 . ? 7.352 0.489 16.240 1.00 34.93 ? 162 HOH B O 1 HETATM 498 O O . HOH D 2 . ? 0.769 8.945 2.023 1.00 38.46 ? 168 HOH B O 1 HETATM 499 O O . HOH D 2 . ? 5.747 -2.059 17.847 1.00 44.82 ? 169 HOH B O 1 HETATM 500 O O . HOH D 2 . ? -8.319 0.148 1.018 1.00 45.92 ? 170 HOH B O 1 HETATM 501 O O . HOH D 2 . ? 1.715 7.797 4.303 1.00 40.31 ? 171 HOH B O 1 HETATM 502 O O . HOH D 2 . ? -7.863 -6.659 -1.589 1.00 40.85 ? 173 HOH B O 1 HETATM 503 O O . HOH D 2 . ? 6.440 -3.205 14.766 1.00 53.18 ? 174 HOH B O 1 HETATM 504 O O . HOH D 2 . ? -7.255 9.186 1.446 0.50 33.61 ? 176 HOH B O 1 HETATM 505 O O . HOH D 2 . ? -2.180 -0.954 16.957 0.50 44.10 ? 177 HOH B O 1 HETATM 506 O O . HOH D 2 . ? -6.444 11.069 3.075 0.50 34.56 ? 178 HOH B O 1 HETATM 507 O O . HOH D 2 . ? -7.767 7.313 14.566 0.50 35.01 ? 180 HOH B O 1 HETATM 508 O O . HOH D 2 . ? -8.383 2.213 -0.771 0.50 30.47 ? 182 HOH B O 1 HETATM 509 O O . HOH D 2 . ? -4.343 1.344 19.510 0.50 26.30 ? 186 HOH B O 1 HETATM 510 O O . HOH D 2 . ? -5.057 -1.536 7.930 0.50 31.05 ? 192 HOH B O 1 HETATM 511 O O . HOH D 2 . ? -7.053 0.780 3.720 0.50 21.56 ? 193 HOH B O 1 HETATM 512 O O . HOH D 2 . ? -5.842 0.760 7.483 0.50 31.55 ? 194 HOH B O 1 HETATM 513 O O . HOH D 2 . ? -6.442 5.079 14.533 0.50 32.19 ? 196 HOH B O 1 HETATM 514 O O . HOH D 2 . ? -6.194 -4.982 -3.703 0.50 36.73 ? 197 HOH B O 1 HETATM 515 O O . HOH D 2 . ? -3.385 12.027 1.281 0.50 37.73 ? 198 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 125 6 6 6 125 FET A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DC 10 10 10 DC C A . n B 1 1 DG 1 11 11 DG G B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DG 3 13 13 DG G B . n B 1 4 DT 4 14 14 DT T B . n B 1 5 DA 5 15 15 DA A B . n B 1 6 125 6 16 16 125 FET B . n B 1 7 DA 7 17 17 DA A B . n B 1 8 DC 8 18 18 DC C B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DC 10 20 20 DC C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 102 102 HOH HOH A . C 2 HOH 2 103 103 HOH HOH A . C 2 HOH 3 105 105 HOH HOH A . C 2 HOH 4 106 106 HOH HOH A . C 2 HOH 5 107 107 HOH HOH A . C 2 HOH 6 108 108 HOH HOH A . C 2 HOH 7 109 109 HOH HOH A . C 2 HOH 8 110 110 HOH HOH A . C 2 HOH 9 111 111 HOH HOH A . C 2 HOH 10 113 113 HOH HOH A . C 2 HOH 11 114 114 HOH HOH A . C 2 HOH 12 115 115 HOH HOH A . C 2 HOH 13 120 120 HOH HOH A . C 2 HOH 14 121 121 HOH HOH A . C 2 HOH 15 122 122 HOH HOH A . C 2 HOH 16 123 123 HOH HOH A . C 2 HOH 17 124 124 HOH HOH A . C 2 HOH 18 126 126 HOH HOH A . C 2 HOH 19 128 128 HOH HOH A . C 2 HOH 20 129 129 HOH HOH A . C 2 HOH 21 130 130 HOH HOH A . C 2 HOH 22 133 133 HOH HOH A . C 2 HOH 23 136 136 HOH HOH A . C 2 HOH 24 140 140 HOH HOH A . C 2 HOH 25 141 141 HOH HOH A . C 2 HOH 26 142 142 HOH HOH A . C 2 HOH 27 143 143 HOH HOH A . C 2 HOH 28 144 144 HOH HOH A . C 2 HOH 29 145 145 HOH HOH A . C 2 HOH 30 146 146 HOH HOH A . C 2 HOH 31 147 147 HOH HOH A . C 2 HOH 32 148 148 HOH HOH A . C 2 HOH 33 150 150 HOH HOH A . C 2 HOH 34 151 151 HOH HOH A . C 2 HOH 35 152 152 HOH HOH A . C 2 HOH 36 154 154 HOH HOH A . C 2 HOH 37 157 157 HOH HOH A . C 2 HOH 38 158 158 HOH HOH A . C 2 HOH 39 159 159 HOH HOH A . C 2 HOH 40 163 163 HOH HOH A . C 2 HOH 41 164 164 HOH HOH A . C 2 HOH 42 165 165 HOH HOH A . C 2 HOH 43 166 166 HOH HOH A . C 2 HOH 44 167 167 HOH HOH A . C 2 HOH 45 172 172 HOH HOH A . C 2 HOH 46 175 175 HOH HOH A . C 2 HOH 47 179 179 HOH HOH A . C 2 HOH 48 181 181 HOH HOH A . C 2 HOH 49 183 183 HOH HOH A . C 2 HOH 50 184 184 HOH HOH A . C 2 HOH 51 185 185 HOH HOH A . C 2 HOH 52 187 187 HOH HOH A . C 2 HOH 53 188 188 HOH HOH A . C 2 HOH 54 189 189 HOH HOH A . C 2 HOH 55 190 190 HOH HOH A . C 2 HOH 56 191 191 HOH HOH A . C 2 HOH 57 195 195 HOH HOH A . C 2 HOH 58 199 199 HOH HOH A . C 2 HOH 59 200 200 HOH HOH A . C 2 HOH 60 201 201 HOH HOH A . D 2 HOH 1 101 101 HOH HOH B . D 2 HOH 2 104 104 HOH HOH B . D 2 HOH 3 112 112 HOH HOH B . D 2 HOH 4 116 116 HOH HOH B . D 2 HOH 5 117 117 HOH HOH B . D 2 HOH 6 118 118 HOH HOH B . D 2 HOH 7 119 119 HOH HOH B . D 2 HOH 8 125 125 HOH HOH B . D 2 HOH 9 127 127 HOH HOH B . D 2 HOH 10 131 131 HOH HOH B . D 2 HOH 11 132 132 HOH HOH B . D 2 HOH 12 134 134 HOH HOH B . D 2 HOH 13 135 135 HOH HOH B . D 2 HOH 14 137 137 HOH HOH B . D 2 HOH 15 138 138 HOH HOH B . D 2 HOH 16 139 139 HOH HOH B . D 2 HOH 17 149 149 HOH HOH B . D 2 HOH 18 153 153 HOH HOH B . D 2 HOH 19 155 155 HOH HOH B . D 2 HOH 20 156 156 HOH HOH B . D 2 HOH 21 160 160 HOH HOH B . D 2 HOH 22 161 161 HOH HOH B . D 2 HOH 23 162 162 HOH HOH B . D 2 HOH 24 168 168 HOH HOH B . D 2 HOH 25 169 169 HOH HOH B . D 2 HOH 26 170 170 HOH HOH B . D 2 HOH 27 171 171 HOH HOH B . D 2 HOH 28 173 173 HOH HOH B . D 2 HOH 29 174 174 HOH HOH B . D 2 HOH 30 176 176 HOH HOH B . D 2 HOH 31 177 177 HOH HOH B . D 2 HOH 32 178 178 HOH HOH B . D 2 HOH 33 180 180 HOH HOH B . D 2 HOH 34 182 182 HOH HOH B . D 2 HOH 35 186 186 HOH HOH B . D 2 HOH 36 192 192 HOH HOH B . D 2 HOH 37 193 193 HOH HOH B . D 2 HOH 38 194 194 HOH HOH B . D 2 HOH 39 196 196 HOH HOH B . D 2 HOH 40 197 197 HOH HOH B . D 2 HOH 41 198 198 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 125 6 A 125 6 ? U ? 2 B 125 6 B 125 16 ? U ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-06-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement . ? 4 # _pdbx_database_remark.id 600 _pdbx_database_remark.text ;HETEROGEN 2'-O-FLUOROETHYL-5-METHYL-URIDINE-5'-MONOPHOSPHATE is also known as 2'-O-FLUOROETHYL-THYMIDINE-5'-MONOPHOSPHATE ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 125 P P N N 1 125 OP1 O N N 2 125 OP2 O N N 3 125 OP3 O N N 4 125 "O5'" O N N 5 125 "C5'" C N N 6 125 "C4'" C N R 7 125 "O4'" O N N 8 125 "C3'" C N R 9 125 "O3'" O N N 10 125 "C2'" C N R 11 125 "O2'" O N N 12 125 "C1'" C N R 13 125 N1 N N N 14 125 C2 C N N 15 125 O2 O N N 16 125 N3 N N N 17 125 C4 C N N 18 125 O4 O N N 19 125 C5 C N N 20 125 C5M C N N 21 125 C6 C N N 22 125 "CA'" C N N 23 125 "CB'" C N N 24 125 "FC'" F N N 25 125 HOP2 H N N 26 125 HOP3 H N N 27 125 "H5'" H N N 28 125 "H5''" H N N 29 125 "H4'" H N N 30 125 "H3'" H N N 31 125 "HO3'" H N N 32 125 "H2'" H N N 33 125 "H1'" H N N 34 125 H3 H N N 35 125 H71 H N N 36 125 H72 H N N 37 125 H73 H N N 38 125 H6 H N N 39 125 "HA'1" H N N 40 125 "HA'2" H N N 41 125 "HB'1" H N N 42 125 "HB'2" H N N 43 DA OP3 O N N 44 DA P P N N 45 DA OP1 O N N 46 DA OP2 O N N 47 DA "O5'" O N N 48 DA "C5'" C N N 49 DA "C4'" C N R 50 DA "O4'" O N N 51 DA "C3'" C N S 52 DA "O3'" O N N 53 DA "C2'" C N N 54 DA "C1'" C N R 55 DA N9 N Y N 56 DA C8 C Y N 57 DA N7 N Y N 58 DA C5 C Y N 59 DA C6 C Y N 60 DA N6 N N N 61 DA N1 N Y N 62 DA C2 C Y N 63 DA N3 N Y N 64 DA C4 C Y N 65 DA HOP3 H N N 66 DA HOP2 H N N 67 DA "H5'" H N N 68 DA "H5''" H N N 69 DA "H4'" H N N 70 DA "H3'" H N N 71 DA "HO3'" H N N 72 DA "H2'" H N N 73 DA "H2''" H N N 74 DA "H1'" H N N 75 DA H8 H N N 76 DA H61 H N N 77 DA H62 H N N 78 DA H2 H N N 79 DC OP3 O N N 80 DC P P N N 81 DC OP1 O N N 82 DC OP2 O N N 83 DC "O5'" O N N 84 DC "C5'" C N N 85 DC "C4'" C N R 86 DC "O4'" O N N 87 DC "C3'" C N S 88 DC "O3'" O N N 89 DC "C2'" C N N 90 DC "C1'" C N R 91 DC N1 N N N 92 DC C2 C N N 93 DC O2 O N N 94 DC N3 N N N 95 DC C4 C N N 96 DC N4 N N N 97 DC C5 C N N 98 DC C6 C N N 99 DC HOP3 H N N 100 DC HOP2 H N N 101 DC "H5'" H N N 102 DC "H5''" H N N 103 DC "H4'" H N N 104 DC "H3'" H N N 105 DC "HO3'" H N N 106 DC "H2'" H N N 107 DC "H2''" H N N 108 DC "H1'" H N N 109 DC H41 H N N 110 DC H42 H N N 111 DC H5 H N N 112 DC H6 H N N 113 DG OP3 O N N 114 DG P P N N 115 DG OP1 O N N 116 DG OP2 O N N 117 DG "O5'" O N N 118 DG "C5'" C N N 119 DG "C4'" C N R 120 DG "O4'" O N N 121 DG "C3'" C N S 122 DG "O3'" O N N 123 DG "C2'" C N N 124 DG "C1'" C N R 125 DG N9 N Y N 126 DG C8 C Y N 127 DG N7 N Y N 128 DG C5 C Y N 129 DG C6 C N N 130 DG O6 O N N 131 DG N1 N N N 132 DG C2 C N N 133 DG N2 N N N 134 DG N3 N N N 135 DG C4 C Y N 136 DG HOP3 H N N 137 DG HOP2 H N N 138 DG "H5'" H N N 139 DG "H5''" H N N 140 DG "H4'" H N N 141 DG "H3'" H N N 142 DG "HO3'" H N N 143 DG "H2'" H N N 144 DG "H2''" H N N 145 DG "H1'" H N N 146 DG H8 H N N 147 DG H1 H N N 148 DG H21 H N N 149 DG H22 H N N 150 DT OP3 O N N 151 DT P P N N 152 DT OP1 O N N 153 DT OP2 O N N 154 DT "O5'" O N N 155 DT "C5'" C N N 156 DT "C4'" C N R 157 DT "O4'" O N N 158 DT "C3'" C N S 159 DT "O3'" O N N 160 DT "C2'" C N N 161 DT "C1'" C N R 162 DT N1 N N N 163 DT C2 C N N 164 DT O2 O N N 165 DT N3 N N N 166 DT C4 C N N 167 DT O4 O N N 168 DT C5 C N N 169 DT C7 C N N 170 DT C6 C N N 171 DT HOP3 H N N 172 DT HOP2 H N N 173 DT "H5'" H N N 174 DT "H5''" H N N 175 DT "H4'" H N N 176 DT "H3'" H N N 177 DT "HO3'" H N N 178 DT "H2'" H N N 179 DT "H2''" H N N 180 DT "H1'" H N N 181 DT H3 H N N 182 DT H71 H N N 183 DT H72 H N N 184 DT H73 H N N 185 DT H6 H N N 186 HOH O O N N 187 HOH H1 H N N 188 HOH H2 H N N 189 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 125 P OP1 doub N N 1 125 P OP2 sing N N 2 125 P OP3 sing N N 3 125 P "O5'" sing N N 4 125 OP2 HOP2 sing N N 5 125 OP3 HOP3 sing N N 6 125 "O5'" "C5'" sing N N 7 125 "C5'" "C4'" sing N N 8 125 "C5'" "H5'" sing N N 9 125 "C5'" "H5''" sing N N 10 125 "C4'" "O4'" sing N N 11 125 "C4'" "C3'" sing N N 12 125 "C4'" "H4'" sing N N 13 125 "O4'" "C1'" sing N N 14 125 "C3'" "O3'" sing N N 15 125 "C3'" "C2'" sing N N 16 125 "C3'" "H3'" sing N N 17 125 "O3'" "HO3'" sing N N 18 125 "C2'" "O2'" sing N N 19 125 "C2'" "C1'" sing N N 20 125 "C2'" "H2'" sing N N 21 125 "O2'" "CA'" sing N N 22 125 "C1'" N1 sing N N 23 125 "C1'" "H1'" sing N N 24 125 N1 C2 sing N N 25 125 N1 C6 sing N N 26 125 C2 O2 doub N N 27 125 C2 N3 sing N N 28 125 N3 C4 sing N N 29 125 N3 H3 sing N N 30 125 C4 O4 doub N N 31 125 C4 C5 sing N N 32 125 C5 C5M sing N N 33 125 C5 C6 doub N N 34 125 C5M H71 sing N N 35 125 C5M H72 sing N N 36 125 C5M H73 sing N N 37 125 C6 H6 sing N N 38 125 "CA'" "CB'" sing N N 39 125 "CA'" "HA'1" sing N N 40 125 "CA'" "HA'2" sing N N 41 125 "CB'" "FC'" sing N N 42 125 "CB'" "HB'1" sing N N 43 125 "CB'" "HB'2" sing N N 44 DA OP3 P sing N N 45 DA OP3 HOP3 sing N N 46 DA P OP1 doub N N 47 DA P OP2 sing N N 48 DA P "O5'" sing N N 49 DA OP2 HOP2 sing N N 50 DA "O5'" "C5'" sing N N 51 DA "C5'" "C4'" sing N N 52 DA "C5'" "H5'" sing N N 53 DA "C5'" "H5''" sing N N 54 DA "C4'" "O4'" sing N N 55 DA "C4'" "C3'" sing N N 56 DA "C4'" "H4'" sing N N 57 DA "O4'" "C1'" sing N N 58 DA "C3'" "O3'" sing N N 59 DA "C3'" "C2'" sing N N 60 DA "C3'" "H3'" sing N N 61 DA "O3'" "HO3'" sing N N 62 DA "C2'" "C1'" sing N N 63 DA "C2'" "H2'" sing N N 64 DA "C2'" "H2''" sing N N 65 DA "C1'" N9 sing N N 66 DA "C1'" "H1'" sing N N 67 DA N9 C8 sing Y N 68 DA N9 C4 sing Y N 69 DA C8 N7 doub Y N 70 DA C8 H8 sing N N 71 DA N7 C5 sing Y N 72 DA C5 C6 sing Y N 73 DA C5 C4 doub Y N 74 DA C6 N6 sing N N 75 DA C6 N1 doub Y N 76 DA N6 H61 sing N N 77 DA N6 H62 sing N N 78 DA N1 C2 sing Y N 79 DA C2 N3 doub Y N 80 DA C2 H2 sing N N 81 DA N3 C4 sing Y N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 HOH O H1 sing N N 194 HOH O H2 sing N N 195 # _ndb_struct_conf_na.entry_id 1Y86 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 10 1_555 -0.316 -0.149 0.274 1.683 -4.682 -1.030 1 A_DG1:DC20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.193 -0.116 0.017 6.742 -15.134 1.675 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DG 3 1_555 B DC 8 1_555 -0.342 -0.110 0.002 -8.689 -15.144 1.405 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DT 4 1_555 B DA 7 1_555 -0.107 -0.142 -0.117 -5.336 -15.993 0.591 4 A_DT4:DA17_B A 4 ? B 17 ? 20 1 1 A DA 5 1_555 B 125 6 1_555 0.192 -0.068 0.246 -1.297 -13.587 -6.481 5 A_DA5:12516_B A 5 ? B 16 ? 20 1 1 A 125 6 1_555 B DA 5 1_555 0.000 -0.118 0.372 3.377 -14.936 3.794 6 A_1256:DA15_B A 6 ? B 15 ? 20 1 1 A DA 7 1_555 B DT 4 1_555 0.013 -0.158 -0.030 4.746 -11.074 3.087 7 A_DA7:DT14_B A 7 ? B 14 ? 20 1 1 A DC 8 1_555 B DG 3 1_555 0.174 -0.195 -0.167 8.226 -11.940 -0.008 8 A_DC8:DG13_B A 8 ? B 13 ? 19 1 1 A DG 9 1_555 B DC 2 1_555 -0.206 -0.077 -0.191 -6.329 -10.886 3.343 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DC 10 1_555 B DG 1 1_555 0.266 -0.094 0.010 -2.163 5.552 -0.071 10 A_DC10:DG11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 10 1_555 A DC 2 1_555 B DG 9 1_555 0.364 -1.537 3.178 3.115 -0.058 39.690 -2.251 -0.183 3.198 -0.085 -4.580 39.807 1 AA_DG1DC2:DG19DC20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DG 3 1_555 B DC 8 1_555 0.234 -2.095 3.523 1.034 10.740 25.333 -6.920 -0.251 2.454 23.194 -2.234 27.501 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 8 1_555 A DT 4 1_555 B DA 7 1_555 -1.049 -1.415 3.077 -0.815 5.876 36.972 -2.908 1.538 2.849 9.193 1.275 37.428 3 AA_DG3DT4:DA17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DT 4 1_555 B DA 7 1_555 A DA 5 1_555 B 125 6 1_555 0.577 -1.604 3.098 0.306 19.606 25.663 -5.665 -0.996 1.527 37.883 -0.592 32.197 4 AA_DT4DA5:12516DA17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DA 5 1_555 B 125 6 1_555 A 125 6 1_555 B DA 5 1_555 0.893 -1.406 3.129 0.893 5.652 32.854 -3.321 -1.420 2.877 9.899 -1.564 33.335 5 AA_DA51256:DA1512516_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A 125 6 1_555 B DA 5 1_555 A DA 7 1_555 B DT 4 1_555 -0.251 -1.424 3.033 1.785 13.621 31.005 -4.291 0.673 2.213 24.055 -3.152 33.843 6 AA_1256DA7:DT14DA15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DA 7 1_555 B DT 4 1_555 A DC 8 1_555 B DG 3 1_555 0.195 -1.635 3.275 0.842 2.703 31.770 -3.458 -0.205 3.133 4.925 -1.534 31.893 7 AA_DA7DC8:DG13DT14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DC 8 1_555 B DG 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.162 -1.968 3.537 0.789 13.220 27.984 -6.134 0.449 2.380 25.601 -1.528 30.903 8 AA_DC8DG9:DC12DG13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 2 1_555 A DC 10 1_555 B DG 1 1_555 0.096 -1.638 3.335 -0.398 0.973 34.880 -2.881 -0.221 3.288 1.622 0.663 34.895 9 AA_DG9DC10:DG11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 410D _pdbx_initial_refinement_model.details 'pdb entry 410D' #