data_333D # _entry.id 333D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 333D pdb_0000333d 10.2210/pdb333d/pdb RCSB ARHB90 ? ? WWPDB D_1000178802 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-10-16 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2024-02-21 5 'Structure model' 2 1 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.occupancy' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 18 4 'Structure model' '_pdbx_struct_conn_angle.value' 19 4 'Structure model' '_struct_conn.pdbx_dist_value' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_symmetry' 27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_symmetry' 34 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 333D _pdbx_database_status.recvd_initial_deposition_date 1997-05-20 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Carter, R.J.' 1 'Baeyens, K.J.' 2 'SantaLucia Jr., J.' 3 'Turner, D.H.' 4 'Holbrook, S.R.' 5 # _citation.id primary _citation.title 'The crystal structure of an RNA oligomer incorporating tandem adenosine-inosine mismatches.' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 25 _citation.page_first 4117 _citation.page_last 4122 _citation.year 1997 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9321667 _citation.pdbx_database_id_DOI 10.1093/nar/25.20.4117 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Carter, R.J.' 1 ? primary 'Baeyens, K.J.' 2 ? primary 'SantaLucia, J.' 3 ? primary 'Turner, D.H.' 4 ? primary 'Holbrook, S.R.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-R(*CP*GP*CP*AP*IP*GP*CP*G)-3') ; 2565.602 1 ? ? ? ? 2 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 3 water nat water 18.015 6 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code CGCAIGCG _entity_poly.pdbx_seq_one_letter_code_can CGCAIGCG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 C n 1 2 G n 1 3 C n 1 4 A n 1 5 I n 1 6 G n 1 7 C n 1 8 G n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 I 'RNA linking' y 'INOSINIC ACID' ? 'C10 H13 N4 O8 P' 348.206 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 C 1 1 1 C C A . n A 1 2 G 2 2 2 G G A . n A 1 3 C 3 3 3 C C A . n A 1 4 A 4 4 4 A A A . n A 1 5 I 5 5 5 I I A . n A 1 6 G 6 6 6 G G A . n A 1 7 C 7 7 7 C C A . n A 1 8 G 8 8 8 G G A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 9 9 CA CA A . C 3 HOH 1 10 10 HOH HOH A . C 3 HOH 2 11 11 HOH HOH A . C 3 HOH 3 12 12 HOH HOH A . C 3 HOH 4 13 13 HOH HOH A . C 3 HOH 5 14 14 HOH HOH A . C 3 HOH 6 15 15 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 X-PLOR refinement 3.1 ? 2 R-AXIS 'data reduction' . ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 333D _cell.length_a 39.050 _cell.length_b 39.050 _cell.length_c 58.850 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 333D _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 # _exptl.entry_id 333D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.52 _exptl_crystal.density_percent_sol 49.7000 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details 'ROOM TEMPERATURE' _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_details 'pH 7.50, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'PEG 400' ? ? ? 1 3 1 CACL2 ? ? ? 1 4 1 HEPES ? ? ? 1 5 2 WATER ? ? ? 1 6 2 'PEG 400' ? ? ? 1 7 2 CACL2 ? ? ? 1 8 2 HEPES ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 297.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IIC' _diffrn_detector.pdbx_collection_date 1993-04-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 333D _reflns.observed_criterion_sigma_I 3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 12.000 _reflns.d_resolution_high 2.520 _reflns.number_obs 1014 _reflns.number_all 5952 _reflns.percent_possible_obs 91.800 _reflns.pdbx_Rmerge_I_obs 0.0790000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.900 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 333D _refine.ls_number_reflns_obs 1014 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 12.000 _refine.ls_d_res_high 2.520 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2460000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2460000 _refine.ls_R_factor_R_free 0.2660000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.00 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details 'NUCLEIC ACID RNA-DNA PARAMETER FILE: G. PARKINSON,ET AL. (1996) ACTA CRYST. D52, 57-64' _refine.pdbx_starting_model 'CGC:GCG FRAGMENT OF ARL048' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 170 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 177 _refine_hist.d_res_high 2.520 _refine_hist.d_res_low 12.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.40 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 11.0 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.39 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_xplor_file.serial_no 1 _pdbx_xplor_file.param_file TOPOL_BERMAN.RNA _pdbx_xplor_file.topol_file PARAM_BERMAN.RNA _pdbx_xplor_file.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 333D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 333D _struct.title 'THE CRYSTAL STRUCTURE OF AN RNA OLIGOMER INCORPORATING TANDEM ADENOSINE-INOSINE MISMATCHES' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 333D _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'A-RNA, DOUBLE HELIX, INTERNAL LOOP, MISMATCHED, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 333D _struct_ref.pdbx_db_accession 333D _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 333D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 333D _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 39.0500000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 29.4250000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 6 OP1 ? ? ? 1_555 B CA . CA ? ? A G 6 A CA 9 1_555 ? ? ? ? ? ? ? 3.280 ? ? metalc2 metalc ? ? A G 8 "O3'" ? ? ? 5_554 B CA . CA ? ? A G 8 A CA 9 1_555 ? ? ? ? ? ? ? 2.603 ? ? metalc3 metalc ? ? A G 8 "O2'" ? ? ? 5_554 B CA . CA ? ? A G 8 A CA 9 1_555 ? ? ? ? ? ? ? 2.684 ? ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 10 1_555 ? ? ? ? ? ? ? 2.668 ? ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 11 1_555 ? ? ? ? ? ? ? 2.608 ? ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 12 1_555 ? ? ? ? ? ? ? 2.671 ? ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 C HOH . O ? ? A CA 9 A HOH 13 1_555 ? ? ? ? ? ? ? 2.577 ? ? hydrog1 hydrog ? ? A C 1 N3 ? ? ? 1_555 A G 8 N1 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 1 N4 ? ? ? 1_555 A G 8 O6 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 1 O2 ? ? ? 1_555 A G 8 N2 ? ? A C 1 A G 8 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 7 N3 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 7 O2 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 7 N4 ? ? A G 2 A C 7 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N3 ? ? ? 1_555 A G 6 N1 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 N4 ? ? ? 1_555 A G 6 O6 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 3 O2 ? ? ? 1_555 A G 6 N2 ? ? A C 3 A G 6 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 A I 5 N1 ? ? A A 4 A I 5 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 A I 5 O6 ? ? A A 4 A I 5 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog12 hydrog ? ? A I 5 N1 ? ? ? 1_555 A A 4 N1 ? ? A I 5 A A 4 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog13 hydrog ? ? A I 5 O6 ? ? ? 1_555 A A 4 N6 ? ? A I 5 A A 4 11_655 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog14 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 3 N3 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 3 O2 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 3 N4 ? ? A G 6 A C 3 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 2 N1 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 2 O6 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 2 N2 ? ? A C 7 A G 2 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 1 N3 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 1 O2 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 1 N4 ? ? A G 8 A C 1 11_655 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 "O3'" ? A G 8 ? A G 8 ? 5_554 128.2 ? 2 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 "O2'" ? A G 8 ? A G 8 ? 5_554 69.0 ? 3 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 "O2'" ? A G 8 ? A G 8 ? 5_554 60.3 ? 4 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 50.6 ? 5 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 124.4 ? 6 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 10 ? 1_555 80.3 ? 7 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 63.9 ? 8 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 91.5 ? 9 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 73.5 ? 10 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 11 ? 1_555 114.3 ? 11 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 173.4 ? 12 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 52.6 ? 13 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 110.1 ? 14 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 123.0 ? 15 O ? C HOH . ? A HOH 11 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 12 ? 1_555 122.4 ? 16 OP1 ? A G 6 ? A G 6 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 110.8 ? 17 "O3'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 60.8 ? 18 "O2'" ? A G 8 ? A G 8 ? 5_554 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 69.5 ? 19 O ? C HOH . ? A HOH 10 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 69.9 ? 20 O ? C HOH . ? A HOH 11 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 141.4 ? 21 O ? C HOH . ? A HOH 12 ? 1_555 CA ? B CA . ? A CA 9 ? 1_555 O ? C HOH . ? A HOH 13 ? 1_555 63.3 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 9 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 6 _struct_site.details 'BINDING SITE FOR RESIDUE CA A 9' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 6 ? G A 6 . ? 1_555 ? 2 AC1 6 G A 8 ? G A 8 . ? 5_554 ? 3 AC1 6 HOH C . ? HOH A 10 . ? 1_555 ? 4 AC1 6 HOH C . ? HOH A 11 . ? 1_555 ? 5 AC1 6 HOH C . ? HOH A 12 . ? 1_555 ? 6 AC1 6 HOH C . ? HOH A 13 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 C _pdbx_validate_rmsd_angle.auth_seq_id_1 3 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 A _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 A _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.97 _pdbx_validate_rmsd_angle.angle_target_value 110.50 _pdbx_validate_rmsd_angle.angle_deviation 7.47 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag Y # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 14 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CA CA CA N N 73 G OP3 O N N 74 G P P N N 75 G OP1 O N N 76 G OP2 O N N 77 G "O5'" O N N 78 G "C5'" C N N 79 G "C4'" C N R 80 G "O4'" O N N 81 G "C3'" C N S 82 G "O3'" O N N 83 G "C2'" C N R 84 G "O2'" O N N 85 G "C1'" C N R 86 G N9 N Y N 87 G C8 C Y N 88 G N7 N Y N 89 G C5 C Y N 90 G C6 C N N 91 G O6 O N N 92 G N1 N N N 93 G C2 C N N 94 G N2 N N N 95 G N3 N N N 96 G C4 C Y N 97 G HOP3 H N N 98 G HOP2 H N N 99 G "H5'" H N N 100 G "H5''" H N N 101 G "H4'" H N N 102 G "H3'" H N N 103 G "HO3'" H N N 104 G "H2'" H N N 105 G "HO2'" H N N 106 G "H1'" H N N 107 G H8 H N N 108 G H1 H N N 109 G H21 H N N 110 G H22 H N N 111 HOH O O N N 112 HOH H1 H N N 113 HOH H2 H N N 114 I OP3 O N N 115 I P P N N 116 I OP1 O N N 117 I OP2 O N N 118 I "O5'" O N N 119 I "C5'" C N N 120 I "C4'" C N R 121 I "O4'" O N N 122 I "C3'" C N S 123 I "O3'" O N N 124 I "C2'" C N R 125 I "O2'" O N N 126 I "C1'" C N R 127 I N9 N Y N 128 I C8 C Y N 129 I N7 N Y N 130 I C5 C Y N 131 I C6 C N N 132 I O6 O N N 133 I N1 N N N 134 I C2 C N N 135 I N3 N N N 136 I C4 C Y N 137 I HOP3 H N N 138 I HOP2 H N N 139 I "H5'" H N N 140 I "H5''" H N N 141 I "H4'" H N N 142 I "H3'" H N N 143 I "HO3'" H N N 144 I "H2'" H N N 145 I "HO2'" H N N 146 I "H1'" H N N 147 I H8 H N N 148 I H1 H N N 149 I H2 H N N 150 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 I OP3 P sing N N 118 I OP3 HOP3 sing N N 119 I P OP1 doub N N 120 I P OP2 sing N N 121 I P "O5'" sing N N 122 I OP2 HOP2 sing N N 123 I "O5'" "C5'" sing N N 124 I "C5'" "C4'" sing N N 125 I "C5'" "H5'" sing N N 126 I "C5'" "H5''" sing N N 127 I "C4'" "O4'" sing N N 128 I "C4'" "C3'" sing N N 129 I "C4'" "H4'" sing N N 130 I "O4'" "C1'" sing N N 131 I "C3'" "O3'" sing N N 132 I "C3'" "C2'" sing N N 133 I "C3'" "H3'" sing N N 134 I "O3'" "HO3'" sing N N 135 I "C2'" "O2'" sing N N 136 I "C2'" "C1'" sing N N 137 I "C2'" "H2'" sing N N 138 I "O2'" "HO2'" sing N N 139 I "C1'" N9 sing N N 140 I "C1'" "H1'" sing N N 141 I N9 C8 sing Y N 142 I N9 C4 sing Y N 143 I C8 N7 doub Y N 144 I C8 H8 sing N N 145 I N7 C5 sing Y N 146 I C5 C6 sing N N 147 I C5 C4 doub Y N 148 I C6 O6 doub N N 149 I C6 N1 sing N N 150 I N1 C2 sing N N 151 I N1 H1 sing N N 152 I C2 N3 doub N N 153 I C2 H2 sing N N 154 I N3 C4 sing N N 155 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 333D 'a-form double helix' 333D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 1 1_555 A G 8 11_655 0.380 -0.429 0.502 7.233 -1.804 -4.454 1 A_C1:G8_A A 1 ? A 8 ? 19 1 1 A G 2 1_555 A C 7 11_655 -0.253 -0.522 0.686 -0.318 -13.423 -7.548 2 A_G2:C7_A A 2 ? A 7 ? 19 1 1 A C 3 1_555 A G 6 11_655 -0.332 -0.020 0.346 -0.152 -7.584 -2.523 3 A_C3:G6_A A 3 ? A 6 ? 19 1 1 A A 4 1_555 A I 5 11_655 -0.411 1.697 0.243 -3.619 -6.393 -3.987 4 A_A4:I5_A A 4 ? A 5 ? 8 ? 1 A I 5 1_555 A A 4 11_655 0.411 1.697 0.243 3.619 -6.393 -3.987 5 A_I5:A4_A A 5 ? A 4 ? 8 ? 1 A G 6 1_555 A C 3 11_655 0.332 -0.020 0.346 0.152 -7.584 -2.523 6 A_G6:C3_A A 6 ? A 3 ? 19 1 1 A C 7 1_555 A G 2 11_655 0.253 -0.522 0.686 0.318 -13.423 -7.548 7 A_C7:G2_A A 7 ? A 2 ? 19 1 1 A G 8 1_555 A C 1 11_655 -0.380 -0.429 0.502 -7.233 -1.804 -4.454 8 A_G8:C1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 1 1_555 A G 8 11_655 A G 2 1_555 A C 7 11_655 -0.430 -1.987 3.416 -1.681 -0.840 31.352 -3.505 0.461 3.485 -1.553 3.108 31.406 1 AA_C1G2:C7G8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A G 2 1_555 A C 7 11_655 A C 3 1_555 A G 6 11_655 0.000 -2.556 3.041 4.581 2.407 34.397 -4.608 0.632 2.838 4.042 -7.692 34.772 2 AA_G2C3:G6C7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A C 3 1_555 A G 6 11_655 A A 4 1_555 A I 5 11_655 0.001 -1.469 3.293 9.013 14.468 30.817 -4.419 1.234 2.310 24.974 -15.558 35.117 3 AA_C3A4:I5G6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A A 4 1_555 A I 5 11_655 A I 5 1_555 A A 4 11_655 0.000 -1.649 2.828 0.000 14.616 24.649 -5.765 0.000 1.614 30.999 0.000 28.598 4 AA_A4I5:A4I5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A I 5 1_555 A A 4 11_655 A G 6 1_555 A C 3 11_655 -0.001 -1.469 3.293 -9.013 14.468 30.817 -4.419 -1.234 2.310 24.974 15.558 35.117 5 AA_I5G6:C3A4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A G 6 1_555 A C 3 11_655 A C 7 1_555 A G 2 11_655 0.000 -2.556 3.041 -4.581 2.407 34.397 -4.608 -0.632 2.838 4.042 7.692 34.772 6 AA_G6C7:G2C3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A C 7 1_555 A G 2 11_655 A G 8 1_555 A C 1 11_655 0.430 -1.987 3.416 1.681 -0.840 31.352 -3.505 -0.461 3.485 -1.553 -3.108 31.406 7 AA_C7G8:C1G2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _pdbx_initial_refinement_model.accession_code 157D _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details 'CGC:GCG FRAGMENT OF ARL048' # _atom_sites.entry_id 333D _atom_sites.fract_transf_matrix[1][1] 0.025608 _atom_sites.fract_transf_matrix[1][2] 0.014785 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029570 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016992 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . C A 1 1 ? 23.308 21.309 18.480 1.00 17.20 ? 1 C A "O5'" 1 ATOM 2 C "C5'" . C A 1 1 ? 23.929 22.379 17.733 1.00 46.81 ? 1 C A "C5'" 1 ATOM 3 C "C4'" . C A 1 1 ? 25.231 22.014 17.062 1.00 18.14 ? 1 C A "C4'" 1 ATOM 4 O "O4'" . C A 1 1 ? 26.181 21.574 18.059 1.00 18.14 ? 1 C A "O4'" 1 ATOM 5 C "C3'" . C A 1 1 ? 25.177 20.890 16.067 1.00 18.14 ? 1 C A "C3'" 1 ATOM 6 O "O3'" . C A 1 1 ? 24.701 21.410 14.827 1.00 46.81 ? 1 C A "O3'" 1 ATOM 7 C "C2'" . C A 1 1 ? 26.640 20.435 16.067 1.00 18.14 ? 1 C A "C2'" 1 ATOM 8 O "O2'" . C A 1 1 ? 27.560 21.325 15.505 1.00 17.20 ? 1 C A "O2'" 1 ATOM 9 C "C1'" . C A 1 1 ? 26.963 20.525 17.546 1.00 18.14 ? 1 C A "C1'" 1 ATOM 10 N N1 . C A 1 1 ? 26.668 19.294 18.279 1.00 17.20 ? 1 C A N1 1 ATOM 11 C C2 . C A 1 1 ? 27.456 18.183 18.034 1.00 17.20 ? 1 C A C2 1 ATOM 12 O O2 . C A 1 1 ? 28.351 18.284 17.178 1.00 17.20 ? 1 C A O2 1 ATOM 13 N N3 . C A 1 1 ? 27.235 17.033 18.717 1.00 17.20 ? 1 C A N3 1 ATOM 14 C C4 . C A 1 1 ? 26.244 16.978 19.596 1.00 17.20 ? 1 C A C4 1 ATOM 15 N N4 . C A 1 1 ? 26.042 15.846 20.227 1.00 17.20 ? 1 C A N4 1 ATOM 16 C C5 . C A 1 1 ? 25.411 18.091 19.852 1.00 17.20 ? 1 C A C5 1 ATOM 17 C C6 . C A 1 1 ? 25.656 19.219 19.184 1.00 17.20 ? 1 C A C6 1 ATOM 18 P P . G A 1 2 ? 23.910 20.434 13.729 1.00 28.67 ? 2 G A P 1 ATOM 19 O OP1 . G A 1 2 ? 23.482 21.412 12.666 1.00 28.67 ? 2 G A OP1 1 ATOM 20 O OP2 . G A 1 2 ? 22.875 19.585 14.397 1.00 28.67 ? 2 G A OP2 1 ATOM 21 O "O5'" . G A 1 2 ? 25.081 19.479 13.170 1.00 22.76 ? 2 G A "O5'" 1 ATOM 22 C "C5'" . G A 1 2 ? 26.149 20.010 12.398 1.00 28.67 ? 2 G A "C5'" 1 ATOM 23 C "C4'" . G A 1 2 ? 27.256 18.978 12.191 1.00 16.70 ? 2 G A "C4'" 1 ATOM 24 O "O4'" . G A 1 2 ? 27.850 18.646 13.452 1.00 16.70 ? 2 G A "O4'" 1 ATOM 25 C "C3'" . G A 1 2 ? 26.909 17.625 11.594 1.00 16.70 ? 2 G A "C3'" 1 ATOM 26 O "O3'" . G A 1 2 ? 26.749 17.688 10.175 1.00 28.67 ? 2 G A "O3'" 1 ATOM 27 C "C2'" . G A 1 2 ? 28.114 16.798 12.016 1.00 16.70 ? 2 G A "C2'" 1 ATOM 28 O "O2'" . G A 1 2 ? 29.331 17.114 11.389 1.00 22.76 ? 2 G A "O2'" 1 ATOM 29 C "C1'" . G A 1 2 ? 28.282 17.288 13.436 1.00 16.70 ? 2 G A "C1'" 1 ATOM 30 N N9 . G A 1 2 ? 27.411 16.517 14.300 1.00 22.76 ? 2 G A N9 1 ATOM 31 C C8 . G A 1 2 ? 26.312 16.979 14.950 1.00 22.76 ? 2 G A C8 1 ATOM 32 N N7 . G A 1 2 ? 25.720 16.058 15.655 1.00 22.76 ? 2 G A N7 1 ATOM 33 C C5 . G A 1 2 ? 26.483 14.927 15.451 1.00 22.76 ? 2 G A C5 1 ATOM 34 C C6 . G A 1 2 ? 26.314 13.657 15.939 1.00 22.76 ? 2 G A C6 1 ATOM 35 O O6 . G A 1 2 ? 25.418 13.241 16.722 1.00 22.76 ? 2 G A O6 1 ATOM 36 N N1 . G A 1 2 ? 27.292 12.795 15.459 1.00 22.76 ? 2 G A N1 1 ATOM 37 C C2 . G A 1 2 ? 28.291 13.143 14.630 1.00 22.76 ? 2 G A C2 1 ATOM 38 N N2 . G A 1 2 ? 29.107 12.176 14.277 1.00 22.76 ? 2 G A N2 1 ATOM 39 N N3 . G A 1 2 ? 28.475 14.348 14.183 1.00 22.76 ? 2 G A N3 1 ATOM 40 C C4 . G A 1 2 ? 27.525 15.186 14.623 1.00 22.76 ? 2 G A C4 1 ATOM 41 P P . C A 1 3 ? 25.783 16.616 9.391 1.00 25.62 ? 3 C A P 1 ATOM 42 O OP1 . C A 1 3 ? 25.981 16.903 7.942 1.00 25.62 ? 3 C A OP1 1 ATOM 43 O OP2 . C A 1 3 ? 24.398 16.662 9.922 1.00 25.62 ? 3 C A OP2 1 ATOM 44 O "O5'" . C A 1 3 ? 26.483 15.217 9.727 1.00 19.55 ? 3 C A "O5'" 1 ATOM 45 C "C5'" . C A 1 3 ? 27.839 14.940 9.370 1.00 25.62 ? 3 C A "C5'" 1 ATOM 46 C "C4'" . C A 1 3 ? 28.090 13.428 9.354 1.00 20.85 ? 3 C A "C4'" 1 ATOM 47 O "O4'" . C A 1 3 ? 28.386 12.946 10.697 1.00 20.85 ? 3 C A "O4'" 1 ATOM 48 C "C3'" . C A 1 3 ? 26.933 12.545 8.883 1.00 20.85 ? 3 C A "C3'" 1 ATOM 49 O "O3'" . C A 1 3 ? 26.844 12.446 7.457 1.00 25.62 ? 3 C A "O3'" 1 ATOM 50 C "C2'" . C A 1 3 ? 27.268 11.216 9.534 1.00 20.85 ? 3 C A "C2'" 1 ATOM 51 O "O2'" . C A 1 3 ? 28.279 10.483 8.873 1.00 19.55 ? 3 C A "O2'" 1 ATOM 52 C "C1'" . C A 1 3 ? 27.786 11.669 10.890 1.00 20.85 ? 3 C A "C1'" 1 ATOM 53 N N1 . C A 1 3 ? 26.706 11.794 11.878 1.00 19.55 ? 3 C A N1 1 ATOM 54 C C2 . C A 1 3 ? 26.402 10.721 12.663 1.00 19.55 ? 3 C A C2 1 ATOM 55 O O2 . C A 1 3 ? 27.047 9.687 12.528 1.00 19.55 ? 3 C A O2 1 ATOM 56 N N3 . C A 1 3 ? 25.410 10.822 13.567 1.00 19.55 ? 3 C A N3 1 ATOM 57 C C4 . C A 1 3 ? 24.742 11.962 13.704 1.00 19.55 ? 3 C A C4 1 ATOM 58 N N4 . C A 1 3 ? 23.779 12.038 14.623 1.00 19.55 ? 3 C A N4 1 ATOM 59 C C5 . C A 1 3 ? 25.034 13.079 12.909 1.00 19.55 ? 3 C A C5 1 ATOM 60 C C6 . C A 1 3 ? 26.021 12.953 12.009 1.00 19.55 ? 3 C A C6 1 ATOM 61 P P . A A 1 4 ? 25.468 11.993 6.744 1.00 14.93 ? 4 A A P 1 ATOM 62 O OP1 . A A 1 4 ? 25.950 11.807 5.378 1.00 14.93 ? 4 A A OP1 1 ATOM 63 O OP2 . A A 1 4 ? 24.256 12.803 6.997 1.00 14.93 ? 4 A A OP2 1 ATOM 64 O "O5'" . A A 1 4 ? 25.289 10.527 7.272 1.00 19.95 ? 4 A A "O5'" 1 ATOM 65 C "C5'" . A A 1 4 ? 24.238 9.732 6.789 1.00 14.93 ? 4 A A "C5'" 1 ATOM 66 C "C4'" . A A 1 4 ? 24.634 8.282 6.837 1.00 34.83 ? 4 A A "C4'" 1 ATOM 67 O "O4'" . A A 1 4 ? 25.346 8.039 8.071 1.00 34.83 ? 4 A A "O4'" 1 ATOM 68 C "C3'" . A A 1 4 ? 23.422 7.390 6.876 1.00 34.83 ? 4 A A "C3'" 1 ATOM 69 O "O3'" . A A 1 4 ? 23.102 7.014 5.552 1.00 14.93 ? 4 A A "O3'" 1 ATOM 70 C "C2'" . A A 1 4 ? 23.816 6.314 7.894 1.00 34.83 ? 4 A A "C2'" 1 ATOM 71 O "O2'" . A A 1 4 ? 24.712 5.334 7.393 1.00 19.95 ? 4 A A "O2'" 1 ATOM 72 C "C1'" . A A 1 4 ? 24.591 7.174 8.893 1.00 34.83 ? 4 A A "C1'" 1 ATOM 73 N N9 . A A 1 4 ? 23.840 8.057 9.797 1.00 19.95 ? 4 A A N9 1 ATOM 74 C C8 . A A 1 4 ? 23.651 9.404 9.629 1.00 19.95 ? 4 A A C8 1 ATOM 75 N N7 . A A 1 4 ? 22.964 9.970 10.591 1.00 19.95 ? 4 A A N7 1 ATOM 76 C C5 . A A 1 4 ? 22.693 8.923 11.452 1.00 19.95 ? 4 A A C5 1 ATOM 77 C C6 . A A 1 4 ? 22.002 8.869 12.662 1.00 19.95 ? 4 A A C6 1 ATOM 78 N N6 . A A 1 4 ? 21.441 9.933 13.252 1.00 19.95 ? 4 A A N6 1 ATOM 79 N N1 . A A 1 4 ? 21.892 7.673 13.253 1.00 19.95 ? 4 A A N1 1 ATOM 80 C C2 . A A 1 4 ? 22.447 6.604 12.662 1.00 19.95 ? 4 A A C2 1 ATOM 81 N N3 . A A 1 4 ? 23.123 6.530 11.543 1.00 19.95 ? 4 A A N3 1 ATOM 82 C C4 . A A 1 4 ? 23.215 7.739 10.975 1.00 19.95 ? 4 A A C4 1 ATOM 83 P P . I A 1 5 ? 21.666 7.423 4.970 1.00 28.47 ? 5 I A P 1 ATOM 84 O OP1 . I A 1 5 ? 21.575 6.862 3.576 1.00 28.47 ? 5 I A OP1 1 ATOM 85 O OP2 . I A 1 5 ? 21.374 8.868 5.211 1.00 28.47 ? 5 I A OP2 1 ATOM 86 O "O5'" . I A 1 5 ? 20.691 6.537 5.854 1.00 32.38 ? 5 I A "O5'" 1 ATOM 87 C "C5'" . I A 1 5 ? 20.871 5.133 5.876 1.00 28.47 ? 5 I A "C5'" 1 ATOM 88 C "C4'" . I A 1 5 ? 20.206 4.534 7.092 1.00 32.02 ? 5 I A "C4'" 1 ATOM 89 O "O4'" . I A 1 5 ? 20.884 4.967 8.303 1.00 32.02 ? 5 I A "O4'" 1 ATOM 90 C "C3'" . I A 1 5 ? 18.772 4.939 7.362 1.00 32.02 ? 5 I A "C3'" 1 ATOM 91 O "O3'" . I A 1 5 ? 17.863 4.287 6.486 1.00 28.47 ? 5 I A "O3'" 1 ATOM 92 C "C2'" . I A 1 5 ? 18.630 4.463 8.799 1.00 32.02 ? 5 I A "C2'" 1 ATOM 93 O "O2'" . I A 1 5 ? 18.536 3.057 8.905 1.00 32.38 ? 5 I A "O2'" 1 ATOM 94 C "C1'" . I A 1 5 ? 19.983 4.873 9.395 1.00 32.02 ? 5 I A "C1'" 1 ATOM 95 N N9 . I A 1 5 ? 19.865 6.180 10.026 1.00 32.38 ? 5 I A N9 1 ATOM 96 C C8 . I A 1 5 ? 20.230 7.380 9.498 1.00 32.38 ? 5 I A C8 1 ATOM 97 N N7 . I A 1 5 ? 19.945 8.395 10.276 1.00 32.38 ? 5 I A N7 1 ATOM 98 C C5 . I A 1 5 ? 19.364 7.811 11.402 1.00 32.38 ? 5 I A C5 1 ATOM 99 C C6 . I A 1 5 ? 18.839 8.409 12.631 1.00 32.38 ? 5 I A C6 1 ATOM 100 O O6 . I A 1 5 ? 18.791 9.629 12.967 1.00 32.38 ? 5 I A O6 1 ATOM 101 N N1 . I A 1 5 ? 18.343 7.438 13.485 1.00 32.38 ? 5 I A N1 1 ATOM 102 C C2 . I A 1 5 ? 18.339 6.090 13.227 1.00 32.38 ? 5 I A C2 1 ATOM 103 N N3 . I A 1 5 ? 18.825 5.525 12.126 1.00 32.38 ? 5 I A N3 1 ATOM 104 C C4 . I A 1 5 ? 19.316 6.438 11.261 1.00 32.38 ? 5 I A C4 1 ATOM 105 P P . G A 1 6 ? 16.378 4.823 6.382 1.00 13.80 ? 6 G A P 1 ATOM 106 O OP1 . G A 1 6 ? 15.689 3.985 5.418 1.00 13.80 ? 6 G A OP1 1 ATOM 107 O OP2 . G A 1 6 ? 16.353 6.281 6.234 1.00 13.80 ? 6 G A OP2 1 ATOM 108 O "O5'" . G A 1 6 ? 15.787 4.486 7.795 1.00 20.76 ? 6 G A "O5'" 1 ATOM 109 C "C5'" . G A 1 6 ? 15.670 3.143 8.204 1.00 13.80 ? 6 G A "C5'" 1 ATOM 110 C "C4'" . G A 1 6 ? 14.954 3.075 9.518 1.00 11.45 ? 6 G A "C4'" 1 ATOM 111 O "O4'" . G A 1 6 ? 15.805 3.654 10.546 1.00 11.45 ? 6 G A "O4'" 1 ATOM 112 C "C3'" . G A 1 6 ? 13.714 3.922 9.539 1.00 11.45 ? 6 G A "C3'" 1 ATOM 113 O "O3'" . G A 1 6 ? 12.639 3.211 8.985 1.00 13.80 ? 6 G A "O3'" 1 ATOM 114 C "C2'" . G A 1 6 ? 13.562 4.197 11.026 1.00 11.45 ? 6 G A "C2'" 1 ATOM 115 O "O2'" . G A 1 6 ? 12.973 3.158 11.757 1.00 20.76 ? 6 G A "O2'" 1 ATOM 116 C "C1'" . G A 1 6 ? 15.010 4.345 11.469 1.00 11.45 ? 6 G A "C1'" 1 ATOM 117 N N9 . G A 1 6 ? 15.425 5.730 11.479 1.00 20.76 ? 6 G A N9 1 ATOM 118 C C8 . G A 1 6 ? 16.310 6.356 10.648 1.00 20.76 ? 6 G A C8 1 ATOM 119 N N7 . G A 1 6 ? 16.464 7.626 10.924 1.00 20.76 ? 6 G A N7 1 ATOM 120 C C5 . G A 1 6 ? 15.629 7.848 12.008 1.00 20.76 ? 6 G A C5 1 ATOM 121 C C6 . G A 1 6 ? 15.356 9.038 12.759 1.00 20.76 ? 6 G A C6 1 ATOM 122 O O6 . G A 1 6 ? 15.838 10.167 12.632 1.00 20.76 ? 6 G A O6 1 ATOM 123 N N1 . G A 1 6 ? 14.423 8.799 13.749 1.00 20.76 ? 6 G A N1 1 ATOM 124 C C2 . G A 1 6 ? 13.834 7.570 14.019 1.00 20.76 ? 6 G A C2 1 ATOM 125 N N2 . G A 1 6 ? 12.959 7.499 15.044 1.00 20.76 ? 6 G A N2 1 ATOM 126 N N3 . G A 1 6 ? 14.082 6.473 13.345 1.00 20.76 ? 6 G A N3 1 ATOM 127 C C4 . G A 1 6 ? 14.978 6.681 12.359 1.00 20.76 ? 6 G A C4 1 ATOM 128 P P . C A 1 7 ? 11.229 3.925 8.838 1.00 16.30 ? 7 C A P 1 ATOM 129 O OP1 . C A 1 7 ? 10.205 2.891 8.823 1.00 16.30 ? 7 C A OP1 1 ATOM 130 O OP2 . C A 1 7 ? 11.199 5.045 7.892 1.00 16.30 ? 7 C A OP2 1 ATOM 131 O "O5'" . C A 1 7 ? 11.063 4.661 10.219 1.00 32.67 ? 7 C A "O5'" 1 ATOM 132 C "C5'" . C A 1 7 ? 10.391 4.046 11.297 1.00 16.30 ? 7 C A "C5'" 1 ATOM 133 C "C4'" . C A 1 7 ? 9.868 5.101 12.188 1.00 14.90 ? 7 C A "C4'" 1 ATOM 134 O "O4'" . C A 1 7 ? 10.967 5.975 12.499 1.00 14.90 ? 7 C A "O4'" 1 ATOM 135 C "C3'" . C A 1 7 ? 8.915 6.087 11.559 1.00 14.90 ? 7 C A "C3'" 1 ATOM 136 O "O3'" . C A 1 7 ? 7.641 5.495 11.510 1.00 16.30 ? 7 C A "O3'" 1 ATOM 137 C "C2'" . C A 1 7 ? 8.970 7.214 12.578 1.00 14.90 ? 7 C A "C2'" 1 ATOM 138 O "O2'" . C A 1 7 ? 8.240 6.875 13.726 1.00 32.67 ? 7 C A "O2'" 1 ATOM 139 C "C1'" . C A 1 7 ? 10.439 7.186 12.982 1.00 14.90 ? 7 C A "C1'" 1 ATOM 140 N N1 . C A 1 7 ? 11.190 8.261 12.409 1.00 32.67 ? 7 C A N1 1 ATOM 141 C C2 . C A 1 7 ? 11.051 9.509 12.956 1.00 32.67 ? 7 C A C2 1 ATOM 142 O O2 . C A 1 7 ? 10.272 9.669 13.905 1.00 32.67 ? 7 C A O2 1 ATOM 143 N N3 . C A 1 7 ? 11.767 10.534 12.441 1.00 32.67 ? 7 C A N3 1 ATOM 144 C C4 . C A 1 7 ? 12.601 10.321 11.410 1.00 32.67 ? 7 C A C4 1 ATOM 145 N N4 . C A 1 7 ? 13.303 11.366 10.941 1.00 32.67 ? 7 C A N4 1 ATOM 146 C C5 . C A 1 7 ? 12.745 9.038 10.826 1.00 32.67 ? 7 C A C5 1 ATOM 147 C C6 . C A 1 7 ? 12.025 8.046 11.352 1.00 32.67 ? 7 C A C6 1 ATOM 148 P P . G A 1 8 ? 6.393 6.273 10.844 1.00 16.57 ? 8 G A P 1 ATOM 149 O OP1 . G A 1 8 ? 5.276 5.311 11.040 1.00 16.57 ? 8 G A OP1 1 ATOM 150 O OP2 . G A 1 8 ? 6.810 6.649 9.505 1.00 16.57 ? 8 G A OP2 1 ATOM 151 O "O5'" . G A 1 8 ? 6.234 7.561 11.785 1.00 16.92 ? 8 G A "O5'" 1 ATOM 152 C "C5'" . G A 1 8 ? 5.303 8.616 11.493 1.00 16.57 ? 8 G A "C5'" 1 ATOM 153 C "C4'" . G A 1 8 ? 5.424 9.771 12.477 1.00 2.00 ? 8 G A "C4'" 1 ATOM 154 O "O4'" . G A 1 8 ? 6.790 10.012 12.794 1.00 2.00 ? 8 G A "O4'" 1 ATOM 155 C "C3'" . G A 1 8 ? 4.916 11.089 11.937 1.00 2.00 ? 8 G A "C3'" 1 ATOM 156 O "O3'" . G A 1 8 ? 3.533 11.372 12.119 1.00 16.57 ? 8 G A "O3'" 1 ATOM 157 C "C2'" . G A 1 8 ? 5.744 12.131 12.653 1.00 2.00 ? 8 G A "C2'" 1 ATOM 158 O "O2'" . G A 1 8 ? 5.166 12.556 13.847 1.00 16.92 ? 8 G A "O2'" 1 ATOM 159 C "C1'" . G A 1 8 ? 7.019 11.381 12.916 1.00 2.00 ? 8 G A "C1'" 1 ATOM 160 N N9 . G A 1 8 ? 8.026 11.750 11.962 1.00 16.92 ? 8 G A N9 1 ATOM 161 C C8 . G A 1 8 ? 8.666 10.935 11.075 1.00 16.92 ? 8 G A C8 1 ATOM 162 N N7 . G A 1 8 ? 9.544 11.564 10.353 1.00 16.92 ? 8 G A N7 1 ATOM 163 C C5 . G A 1 8 ? 9.472 12.879 10.797 1.00 16.92 ? 8 G A C5 1 ATOM 164 C C6 . G A 1 8 ? 10.186 14.014 10.396 1.00 16.92 ? 8 G A C6 1 ATOM 165 O O6 . G A 1 8 ? 11.045 14.112 9.546 1.00 16.92 ? 8 G A O6 1 ATOM 166 N N1 . G A 1 8 ? 9.818 15.135 11.096 1.00 16.92 ? 8 G A N1 1 ATOM 167 C C2 . G A 1 8 ? 8.895 15.165 12.054 1.00 16.92 ? 8 G A C2 1 ATOM 168 N N2 . G A 1 8 ? 8.720 16.358 12.598 1.00 16.92 ? 8 G A N2 1 ATOM 169 N N3 . G A 1 8 ? 8.187 14.113 12.456 1.00 16.92 ? 8 G A N3 1 ATOM 170 C C4 . G A 1 8 ? 8.537 13.005 11.783 1.00 16.92 ? 8 G A C4 1 HETATM 171 CA CA . CA B 2 . ? 12.972 4.412 3.631 1.00 32.08 ? 9 CA A CA 1 HETATM 172 O O . HOH C 3 . ? 13.276 4.420 6.282 1.00 34.79 ? 10 HOH A O 1 HETATM 173 O O . HOH C 3 . ? 15.143 3.845 2.302 1.00 39.25 ? 11 HOH A O 1 HETATM 174 O O . HOH C 3 . ? 10.604 4.732 2.438 1.00 11.45 ? 12 HOH A O 1 HETATM 175 O O . HOH C 3 . ? 10.948 3.284 4.758 1.00 24.45 ? 13 HOH A O 1 HETATM 176 O O . HOH C 3 . ? 3.685 6.380 9.810 0.50 7.13 ? 14 HOH A O 1 HETATM 177 O O . HOH C 3 . ? 19.968 8.196 1.864 1.00 35.13 ? 15 HOH A O 1 #