data_3SGS # _entry.id 3SGS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 3SGS pdb_00003sgs 10.2210/pdb3sgs/pdb RCSB RCSB066182 ? ? WWPDB D_1000066182 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-03-21 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.entry_id 3SGS _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2011-06-15 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3SGM 'Bromoderivative-2 of amyloid-related segment of alphaB-crystallin residues 90-100' unspecified PDB 3SGN 'Bromoderivative-8 of amyloid-related segment of alphaB-crystallin residues 90-100' unspecified PDB 3SGO 'Amyloid-related segment of alphaB-crystallin residues 90-100' unspecified PDB 3SGP 'Amyloid-related segment of alphaB-crystallin residues 90-100 mutant V91L' unspecified PDB 3SGR 'Tandem repeat of amyloid-related segment of alphaB-crystallin residues 90-100 mutant V91L' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Laganowsky, A.' 1 'Sawaya, M.R.' 2 'Cascio, D.' 3 'Eisenberg, D.' 4 # _citation.id primary _citation.title 'Atomic view of a toxic amyloid small oligomer.' _citation.journal_abbrev Science _citation.journal_volume 335 _citation.page_first 1228 _citation.page_last 1231 _citation.year 2012 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22403391 _citation.pdbx_database_id_DOI 10.1126/science.1213151 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Laganowsky, A.' 1 ? primary 'Liu, C.' 2 ? primary 'Sawaya, M.R.' 3 ? primary 'Whitelegge, J.P.' 4 ? primary 'Park, J.' 5 ? primary 'Zhao, M.' 6 ? primary 'Pensalfini, A.' 7 ? primary 'Soriaga, A.B.' 8 ? primary 'Landau, M.' 9 ? primary 'Teng, P.K.' 10 ? primary 'Cascio, D.' 11 ? primary 'Glabe, C.' 12 ? primary 'Eisenberg, D.' 13 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Alpha-crystallin B chain' 630.688 1 ? ? ? ? 2 water nat water 18.015 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Alpha(B)-crystallin, Heat shock protein beta-5, HspB5, Renal carcinoma antigen NY-REN-27, Rosenthal fiber component' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GDVIEV _entity_poly.pdbx_seq_one_letter_code_can GDVIEV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 VAL n 1 4 ILE n 1 5 GLU n 1 6 VAL n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'synthetic peptide' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 VAL 6 6 6 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 7 1 HOH HOH A . B 2 HOH 2 8 2 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # _cell.length_a 4.821 _cell.length_b 19.500 _cell.length_c 21.004 _cell.angle_alpha 90.000 _cell.angle_beta 94.230 _cell.angle_gamma 90.000 _cell.entry_id 3SGS _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 3SGS _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 3SGS _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews ? _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '2.1M DL-MALIC ACID pH 7.0, vapor diffusion, hanging drop, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2008-02-25 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E # _reflns.entry_id 3SGS _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 90.000 _reflns.number_obs 438 _reflns.pdbx_Rmerge_I_obs 0.178 _reflns.pdbx_netI_over_sigmaI 24.200 _reflns.pdbx_chi_squared 2.341 _reflns.pdbx_redundancy 4.900 _reflns.percent_possible_obs 97.600 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.700 1.830 ? ? ? 0.386 ? ? 1.894 5.000 ? 82 100.000 1 1 1.830 2.020 ? ? ? 0.215 ? ? 7.822 4.800 ? 83 100.000 2 1 2.020 2.310 ? ? ? 0.205 ? ? 0.909 4.800 ? 99 100.000 3 1 2.310 2.910 ? ? ? 0.155 ? ? 0.710 5.100 ? 78 91.800 4 1 2.910 90.000 ? ? ? 0.146 ? ? 0.875 4.800 ? 96 96.000 5 1 # _refine.entry_id 3SGS _refine.ls_d_res_high 1.7030 _refine.ls_d_res_low 14.2700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.7200 _refine.ls_number_reflns_obs 428 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2133 _refine.ls_R_factor_R_work 0.2123 _refine.ls_wR_factor_R_work 0.2494 _refine.ls_R_factor_R_free 0.2249 _refine.ls_wR_factor_R_free 0.2767 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_number_reflns_R_free 43 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 9.9159 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.0200 _refine.aniso_B[2][2] 0.0300 _refine.aniso_B[3][3] -0.0100 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0100 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9280 _refine.correlation_coeff_Fo_to_Fc_free 0.8750 _refine.overall_SU_R_Cruickshank_DPI 0.1806 _refine.overall_SU_R_free 0.1383 _refine.pdbx_overall_ESU_R_Free 0.1380 _refine.overall_SU_ML 0.0890 _refine.overall_SU_B 2.7190 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8599 _refine.B_iso_max 30.600 _refine.B_iso_min 3.890 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_ESU_R 0.181 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 44 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 46 _refine_hist.d_res_high 1.7030 _refine_hist.d_res_low 14.2700 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 43 0.011 0.022 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 23 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 58 1.130 2.047 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 59 0.709 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 5 6.282 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 2 28.623 30.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 7 15.268 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 8 0.049 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 47 0.003 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 5 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 29 0.994 1.500 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 12 0.085 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 47 1.697 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 14 0.751 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 11 1.195 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.7030 _refine_ls_shell.d_res_low 1.9010 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 99 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2920 _refine_ls_shell.R_factor_R_free 0.2010 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 11 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 110 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 3SGS _struct.title 'Amyloid-related segment of alphaB-crystallin residues 95-100' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 3SGS _struct_keywords.text 'amyloid, amyloid fibril, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CRYAB_HUMAN _struct_ref.pdbx_db_accession P02511 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code GDVIEV _struct_ref.pdbx_align_begin 95 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 3SGS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 6 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02511 _struct_ref_seq.db_align_beg 95 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 100 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASP N N N N 1 ASP CA C N S 2 ASP C C N N 3 ASP O O N N 4 ASP CB C N N 5 ASP CG C N N 6 ASP OD1 O N N 7 ASP OD2 O N N 8 ASP OXT O N N 9 ASP H H N N 10 ASP H2 H N N 11 ASP HA H N N 12 ASP HB2 H N N 13 ASP HB3 H N N 14 ASP HD2 H N N 15 ASP HXT H N N 16 GLU N N N N 17 GLU CA C N S 18 GLU C C N N 19 GLU O O N N 20 GLU CB C N N 21 GLU CG C N N 22 GLU CD C N N 23 GLU OE1 O N N 24 GLU OE2 O N N 25 GLU OXT O N N 26 GLU H H N N 27 GLU H2 H N N 28 GLU HA H N N 29 GLU HB2 H N N 30 GLU HB3 H N N 31 GLU HG2 H N N 32 GLU HG3 H N N 33 GLU HE2 H N N 34 GLU HXT H N N 35 GLY N N N N 36 GLY CA C N N 37 GLY C C N N 38 GLY O O N N 39 GLY OXT O N N 40 GLY H H N N 41 GLY H2 H N N 42 GLY HA2 H N N 43 GLY HA3 H N N 44 GLY HXT H N N 45 HOH O O N N 46 HOH H1 H N N 47 HOH H2 H N N 48 ILE N N N N 49 ILE CA C N S 50 ILE C C N N 51 ILE O O N N 52 ILE CB C N S 53 ILE CG1 C N N 54 ILE CG2 C N N 55 ILE CD1 C N N 56 ILE OXT O N N 57 ILE H H N N 58 ILE H2 H N N 59 ILE HA H N N 60 ILE HB H N N 61 ILE HG12 H N N 62 ILE HG13 H N N 63 ILE HG21 H N N 64 ILE HG22 H N N 65 ILE HG23 H N N 66 ILE HD11 H N N 67 ILE HD12 H N N 68 ILE HD13 H N N 69 ILE HXT H N N 70 VAL N N N N 71 VAL CA C N S 72 VAL C C N N 73 VAL O O N N 74 VAL CB C N N 75 VAL CG1 C N N 76 VAL CG2 C N N 77 VAL OXT O N N 78 VAL H H N N 79 VAL H2 H N N 80 VAL HA H N N 81 VAL HB H N N 82 VAL HG11 H N N 83 VAL HG12 H N N 84 VAL HG13 H N N 85 VAL HG21 H N N 86 VAL HG22 H N N 87 VAL HG23 H N N 88 VAL HXT H N N 89 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASP N CA sing N N 1 ASP N H sing N N 2 ASP N H2 sing N N 3 ASP CA C sing N N 4 ASP CA CB sing N N 5 ASP CA HA sing N N 6 ASP C O doub N N 7 ASP C OXT sing N N 8 ASP CB CG sing N N 9 ASP CB HB2 sing N N 10 ASP CB HB3 sing N N 11 ASP CG OD1 doub N N 12 ASP CG OD2 sing N N 13 ASP OD2 HD2 sing N N 14 ASP OXT HXT sing N N 15 GLU N CA sing N N 16 GLU N H sing N N 17 GLU N H2 sing N N 18 GLU CA C sing N N 19 GLU CA CB sing N N 20 GLU CA HA sing N N 21 GLU C O doub N N 22 GLU C OXT sing N N 23 GLU CB CG sing N N 24 GLU CB HB2 sing N N 25 GLU CB HB3 sing N N 26 GLU CG CD sing N N 27 GLU CG HG2 sing N N 28 GLU CG HG3 sing N N 29 GLU CD OE1 doub N N 30 GLU CD OE2 sing N N 31 GLU OE2 HE2 sing N N 32 GLU OXT HXT sing N N 33 GLY N CA sing N N 34 GLY N H sing N N 35 GLY N H2 sing N N 36 GLY CA C sing N N 37 GLY CA HA2 sing N N 38 GLY CA HA3 sing N N 39 GLY C O doub N N 40 GLY C OXT sing N N 41 GLY OXT HXT sing N N 42 HOH O H1 sing N N 43 HOH O H2 sing N N 44 ILE N CA sing N N 45 ILE N H sing N N 46 ILE N H2 sing N N 47 ILE CA C sing N N 48 ILE CA CB sing N N 49 ILE CA HA sing N N 50 ILE C O doub N N 51 ILE C OXT sing N N 52 ILE CB CG1 sing N N 53 ILE CB CG2 sing N N 54 ILE CB HB sing N N 55 ILE CG1 CD1 sing N N 56 ILE CG1 HG12 sing N N 57 ILE CG1 HG13 sing N N 58 ILE CG2 HG21 sing N N 59 ILE CG2 HG22 sing N N 60 ILE CG2 HG23 sing N N 61 ILE CD1 HD11 sing N N 62 ILE CD1 HD12 sing N N 63 ILE CD1 HD13 sing N N 64 ILE OXT HXT sing N N 65 VAL N CA sing N N 66 VAL N H sing N N 67 VAL N H2 sing N N 68 VAL CA C sing N N 69 VAL CA CB sing N N 70 VAL CA HA sing N N 71 VAL C O doub N N 72 VAL C OXT sing N N 73 VAL CB CG1 sing N N 74 VAL CB CG2 sing N N 75 VAL CB HB sing N N 76 VAL CG1 HG11 sing N N 77 VAL CG1 HG12 sing N N 78 VAL CG1 HG13 sing N N 79 VAL CG2 HG21 sing N N 80 VAL CG2 HG22 sing N N 81 VAL CG2 HG23 sing N N 82 VAL OXT HXT sing N N 83 # _atom_sites.entry_id 3SGS _atom_sites.fract_transf_matrix[1][1] 0.207426 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.015331 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.051282 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.047740 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . GLY A 1 1 ? 2.186 -1.809 10.234 1.00 10.29 ? 1 GLY A N 1 ATOM 2 C CA . GLY A 1 1 ? 2.320 -0.815 9.141 1.00 9.80 ? 1 GLY A CA 1 ATOM 3 C C . GLY A 1 1 ? 1.418 -1.163 7.979 1.00 9.53 ? 1 GLY A C 1 ATOM 4 O O . GLY A 1 1 ? 0.509 -1.993 8.106 1.00 10.48 ? 1 GLY A O 1 ATOM 5 N N . ASP A 1 2 ? 1.661 -0.515 6.852 1.00 8.39 ? 2 ASP A N 1 ATOM 6 C CA . ASP A 1 2 ? 0.811 -0.643 5.673 1.00 7.85 ? 2 ASP A CA 1 ATOM 7 C C . ASP A 1 2 ? 1.470 -1.495 4.602 1.00 6.99 ? 2 ASP A C 1 ATOM 8 O O . ASP A 1 2 ? 2.696 -1.595 4.534 1.00 6.68 ? 2 ASP A O 1 ATOM 9 C CB . ASP A 1 2 ? 0.516 0.739 5.087 1.00 7.92 ? 2 ASP A CB 1 ATOM 10 C CG . ASP A 1 2 ? -0.103 1.696 6.094 1.00 8.88 ? 2 ASP A CG 1 ATOM 11 O OD1 . ASP A 1 2 ? -0.972 1.260 6.879 1.00 9.26 ? 2 ASP A OD1 1 ATOM 12 O OD2 . ASP A 1 2 ? 0.269 2.895 6.083 1.00 9.54 ? 2 ASP A OD2 1 ATOM 13 N N . VAL A 1 3 ? 0.639 -2.089 3.747 1.00 5.97 ? 3 VAL A N 1 ATOM 14 C CA . VAL A 1 3 ? 1.107 -2.730 2.539 1.00 5.50 ? 3 VAL A CA 1 ATOM 15 C C . VAL A 1 3 ? 0.524 -1.988 1.346 1.00 5.36 ? 3 VAL A C 1 ATOM 16 O O . VAL A 1 3 ? -0.705 -1.905 1.195 1.00 4.65 ? 3 VAL A O 1 ATOM 17 C CB . VAL A 1 3 ? 0.686 -4.205 2.485 1.00 5.06 ? 3 VAL A CB 1 ATOM 18 C CG1 . VAL A 1 3 ? 1.198 -4.839 1.211 1.00 5.22 ? 3 VAL A CG1 1 ATOM 19 C CG2 . VAL A 1 3 ? 1.197 -4.950 3.727 1.00 5.82 ? 3 VAL A CG2 1 ATOM 20 N N . ILE A 1 4 ? 1.395 -1.423 0.522 1.00 5.14 ? 4 ILE A N 1 ATOM 21 C CA . ILE A 1 4 ? 0.955 -0.615 -0.606 1.00 5.38 ? 4 ILE A CA 1 ATOM 22 C C . ILE A 1 4 ? 1.465 -1.216 -1.907 1.00 5.88 ? 4 ILE A C 1 ATOM 23 O O . ILE A 1 4 ? 2.673 -1.309 -2.125 1.00 5.24 ? 4 ILE A O 1 ATOM 24 C CB . ILE A 1 4 ? 1.414 0.853 -0.480 1.00 4.86 ? 4 ILE A CB 1 ATOM 25 C CG1 . ILE A 1 4 ? 0.807 1.508 0.765 1.00 6.05 ? 4 ILE A CG1 1 ATOM 26 C CG2 . ILE A 1 4 ? 0.992 1.652 -1.697 1.00 3.89 ? 4 ILE A CG2 1 ATOM 27 C CD1 . ILE A 1 4 ? 1.343 2.897 1.039 1.00 7.01 ? 4 ILE A CD1 1 ATOM 28 N N . GLU A 1 5 ? 0.522 -1.599 -2.768 1.00 7.64 ? 5 GLU A N 1 ATOM 29 C CA . GLU A 1 5 ? 0.797 -2.207 -4.071 1.00 9.57 ? 5 GLU A CA 1 ATOM 30 C C . GLU A 1 5 ? 0.245 -1.323 -5.182 1.00 11.31 ? 5 GLU A C 1 ATOM 31 O O . GLU A 1 5 ? -0.967 -1.167 -5.324 1.00 11.92 ? 5 GLU A O 1 ATOM 32 C CB . GLU A 1 5 ? 0.155 -3.597 -4.151 1.00 9.45 ? 5 GLU A CB 1 ATOM 33 C CG . GLU A 1 5 ? 1.035 -4.713 -3.663 1.00 10.16 ? 5 GLU A CG 1 ATOM 34 C CD . GLU A 1 5 ? 2.009 -5.243 -4.706 1.00 10.01 ? 5 GLU A CD 1 ATOM 35 O OE1 . GLU A 1 5 ? 2.127 -4.680 -5.822 1.00 10.67 ? 5 GLU A OE1 1 ATOM 36 O OE2 . GLU A 1 5 ? 2.653 -6.260 -4.403 1.00 10.98 ? 5 GLU A OE2 1 ATOM 37 N N . VAL A 1 6 ? 1.129 -0.742 -5.983 1.00 13.27 ? 6 VAL A N 1 ATOM 38 C CA . VAL A 1 6 ? 0.694 0.201 -7.016 1.00 15.08 ? 6 VAL A CA 1 ATOM 39 C C . VAL A 1 6 ? 1.239 -0.152 -8.414 1.00 16.11 ? 6 VAL A C 1 ATOM 40 O O . VAL A 1 6 ? 2.388 0.136 -8.755 1.00 17.57 ? 6 VAL A O 1 ATOM 41 C CB . VAL A 1 6 ? 1.089 1.654 -6.625 1.00 15.51 ? 6 VAL A CB 1 ATOM 42 C CG1 . VAL A 1 6 ? 0.230 2.140 -5.472 1.00 15.79 ? 6 VAL A CG1 1 ATOM 43 C CG2 . VAL A 1 6 ? 2.539 1.722 -6.216 1.00 16.27 ? 6 VAL A CG2 1 ATOM 44 O OXT . VAL A 1 6 ? 0.534 -0.718 -9.323 1.00 17.23 ? 6 VAL A OXT 1 HETATM 45 O O . HOH B 2 . ? -1.258 -3.852 6.869 1.00 20.35 ? 7 HOH A O 1 HETATM 46 O O . HOH B 2 . ? -2.085 3.217 8.261 1.00 30.60 ? 8 HOH A O 1 #