Structure based on 3b5j | Ideal structure |
|
Name: 2',3'-o-[(1r,6r)-2,4,6-trinitrocyclohexa-2,4-diene-1,1-diyl]adenosine 5'-(trihydrogen diphosphate) |
Formula: C16 H16 N8 O16 P2 |
Weight: 638.290 |
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH]4O[C]5(O[CH]34)[CH](C=C(C=C5[N+]([O-])=O)[N+]([O-])=O)[N+]([O-])=O" |
Spacial conformation based on PDB
3b5j. Also present on 3ar6 |
RESIDUE 12D 58
CONECT P1 4 O1 O2 O3 O6
CONECT O1 2 P1 H14
CONECT O2 1 P1
CONECT O3 2 P1 H15
CONECT P2 4 O4 O5 O6 O7
CONECT O4 1 P2
CONECT O5 2 P2 H16
CONECT O6 2 P1 P2
CONECT O7 2 P2 C1
CONECT C1 4 O7 C2 H1 H2
CONECT C2 4 C1 O8 C3 H3
CONECT O8 2 C2 C5
CONECT C3 4 C2 O9 C4 H4
CONECT O9 2 C3 C11
CONECT C4 4 C3 O10 C5 H5
CONECT O10 2 C4 C11
CONECT C5 4 O8 C4 N1 H6
CONECT N1 3 C5 C6 C10
CONECT C6 3 N1 N2 H7
CONECT N2 2 C6 C7
CONECT C7 3 N2 C8 C10
CONECT C8 3 C7 N3 N4
CONECT N3 3 C8 H8 H9
CONECT N4 2 C8 C9
CONECT C9 3 N4 N5 H10
CONECT N5 2 C9 C10
CONECT C10 3 N1 C7 N5
CONECT C11 4 O9 O10 C12 C16
CONECT C12 4 C11 C13 N6 H11
CONECT C13 3 C12 C14 H12
CONECT C14 3 C13 C15 N7
CONECT C15 3 C14 C16 H13
CONECT C16 3 C11 C15 N8
CONECT N6 3 C12 O11 O12
CONECT N7 3 C14 O13 O14
CONECT N8 3 C16 O15 O16
CONECT O11 1 N6
CONECT O12 1 N6
CONECT O13 1 N7
CONECT O14 1 N7
CONECT O15 1 N8
CONECT O16 1 N8
CONECT H1 1 C1
CONECT H2 1 C1
CONECT H3 1 C2
CONECT H4 1 C3
CONECT H5 1 C4
CONECT H6 1 C5
CONECT H7 1 C6
CONECT H8 1 N3
CONECT H9 1 N3
CONECT H10 1 C9
CONECT H11 1 C12
CONECT H12 1 C13
CONECT H13 1 C15
CONECT H14 1 O1
CONECT H15 1 O3
CONECT H16 1 O5
END
HET 12D 58
HETNAM 12D 2',3'-O-[(1R,6R)-2,4,6-trinitrocyclohexa-2,4-diene-1,1-
HETNAM 2 12D diyl]adenosine 5'-(trihydrogen diphosphate)
FORMUL 12D C16 H16 N8 O16 P2