MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 5'-o-[({[(2-{[(2-aminophenyl)carbonyl]oxy}ethyl)oxy]phosphinato}oxy)phosphinato]cytidine | ||
| Formula: C18 H24 N4 O13 P2 | ||
| Weight: 566.350 | ||
| SMILES: "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)OCCOC(=O)c3ccccc3N)[CH](O)[CH]2O" | ||
| Spacial conformation based on PDB 2amt |
RESIDUE 1AA 61
CONECT O1 1 C1
CONECT C1 3 O1 N4 N2
CONECT N4 2 C1 C9'
CONECT C9' 3 N4 N3 C8'
CONECT N3 3 C9' HN31 HN32
CONECT C8' 3 C9' C7' H8'
CONECT C7' 3 C8' N2 H7'
CONECT N2 3 C1 C7' C2
CONECT C2 4 N2 O2' C3 H2
CONECT O2' 2 C2 C5
CONECT C3 4 C2 O4' C4 H3
CONECT O4' 2 C3 H4'
CONECT C4 4 C3 O3' C5 H4
CONECT O3' 2 C4 H6
CONECT C5 4 O2' C4 C6 H5
CONECT C6 4 C5 O2 H61 H62
CONECT O2 2 C6 P1
CONECT P1 4 O2 O1' O9 O3
CONECT O1' 1 P1
CONECT O9 2 P1 HO9
CONECT O3 2 P1 P2
CONECT P2 4 O3 O8 O7 O4
CONECT O8 1 P2
CONECT O7 2 P2 HO7
CONECT O4 2 P2 C7
CONECT C7 4 O4 C8 H71 H72
CONECT C8 4 C7 O5 H81 H82
CONECT O5 2 C8 C9
CONECT C9 3 O5 O6 C1'
CONECT O6 1 C9
CONECT C1' 3 C9 C2' C6'
CONECT C2' 3 C1' C3' H2'
CONECT C3' 3 C2' C4' H3'
CONECT C4' 3 C3' C5' H1
CONECT C5' 3 C4' C6' H5'
CONECT C6' 3 C1' C5' N1
CONECT N1 3 C6' HN11 HN12
CONECT HN31 1 N3
CONECT HN32 1 N3
CONECT H8' 1 C8'
CONECT H7' 1 C7'
CONECT H2 1 C2
CONECT H3 1 C3
CONECT H4' 1 O4'
CONECT H4 1 C4
CONECT H6 1 O3'
CONECT H5 1 C5
CONECT H61 1 C6
CONECT H62 1 C6
CONECT HO9 1 O9
CONECT HO7 1 O7
CONECT H71 1 C7
CONECT H72 1 C7
CONECT H81 1 C8
CONECT H82 1 C8
CONECT H2' 1 C2'
CONECT H3' 1 C3'
CONECT H1 1 C4'
CONECT H5' 1 C5'
CONECT HN11 1 N1
CONECT HN12 1 N1
END
HET 1AA 61
HETNAM 1AA 5'-O-[({[(2-{[(2-AMINOPHENYL)CARBONYL]OXY}ETHYL)OXY]PHO
HETNAM 2 1AA SPHINATO}OXY)PHOSPHINATO]CYTIDINE
FORMUL 1AA C18 H24 N4 O13 P2
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This OCA
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