Structure based on 2c3p | Ideal structure |
|
Name: 1-(2-{(2s,4r,5r)-3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-[(1s)-1-carboxy-1-hydroxyethyl]-4-methyl-1,3-thiazolidin-5-yl}ethoxy)-1,1,3,3-tetrahydroxy-1lambda~5~-diphosphox-1-en-2-ium 3-oxide |
Formula: C15 H26 N4 O10 P2 S |
Weight: 516.400 |
SMILES: "C[CH]1[CH](CCO[P](O)(=O)O[P](O)(O)=O)S[CH](N1Cc2cnc(C)nc2N)[C](C)(O)C(O)=O" |
Spacial conformation based on PDB
2c3p |
RESIDUE 1TP 58
CONECT N1' 2 C2' C6'
CONECT C2' 3 N1' C2A N3'
CONECT C2A 4 C2' H2A1 H2A2 H2A3
CONECT N3' 2 C2' C4'
CONECT C4' 3 N3' N4' C5'
CONECT N4' 3 C4' H4'1 H4'2
CONECT C5' 3 C4' C6' C7'
CONECT C6' 3 N1' C5' H6'
CONECT C7' 4 C5' N3 H7'1 H7'2
CONECT N3 3 C7' C2 C4
CONECT C2 4 N3 S1 C15 H2
CONECT S1 2 C2 C5
CONECT C5 4 S1 C4 C5A H5
CONECT C4 4 N3 C5 C4A H4
CONECT C4A 4 C4 H4A1 H4A2 H4A3
CONECT C5A 4 C5 C5B H5A1 H5A2
CONECT C5B 4 C5A O5G H5B1 H5B2
CONECT O5G 2 C5B P1
CONECT P1 4 O5G O11 O12 O13
CONECT O11 2 P1 P2
CONECT O12 1 P1
CONECT O13 2 P1 HO13
CONECT P2 4 O11 O21 O22 O23
CONECT O21 1 P2
CONECT O22 2 P2 H6B1
CONECT O23 2 P2 HO23
CONECT C15 4 C2 O25 C35 C25
CONECT O25 2 C15 H25
CONECT C35 4 C15 H351 H352 H353
CONECT C25 3 C15 O35 O45
CONECT O35 1 C25
CONECT O45 2 C25 H45
CONECT H2A1 1 C2A
CONECT H2A2 1 C2A
CONECT H2A3 1 C2A
CONECT H4'1 1 N4'
CONECT H4'2 1 N4'
CONECT H6' 1 C6'
CONECT H7'1 1 C7'
CONECT H7'2 1 C7'
CONECT H2 1 C2
CONECT H5 1 C5
CONECT H4 1 C4
CONECT H4A1 1 C4A
CONECT H4A2 1 C4A
CONECT H4A3 1 C4A
CONECT H5A1 1 C5A
CONECT H5A2 1 C5A
CONECT H5B1 1 C5B
CONECT H5B2 1 C5B
CONECT HO13 1 O13
CONECT H6B1 1 O22
CONECT HO23 1 O23
CONECT H25 1 O25
CONECT H351 1 C35
CONECT H352 1 C35
CONECT H353 1 C35
CONECT H45 1 O45
END
HET 1TP 58
HETNAM 1TP 1-(2-{(2S,4R,5R)-3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)MET
HETNAM 2 1TP HYL]-2-[(1S)-1-CARBOXY-1-HYDROXYETHYL]-4-METHYL-1,3-THI
HETNAM 3 1TP AZOLIDIN-5-YL}ETHOXY)-1,1,3,3-TETRAHYDROXY-1LAMBDA~5~-D
HETNAM 4 1TP IPHOSPHOX-1-EN-2-IUM 3-OXIDE
FORMUL 1TP C15 H26 N4 O10 P2 S1