Hetgroup: 3DG

Structure based on 1v45

Ideal structure

Name: 9-(3-deoxy-beta-d-ribofuranosyl)guanine

Formula: C10 H13 N5 O4

Weight: 267.241

SMILES: "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)C[CH]3O"

Spacial conformation based on PDB 1v45

RESIDUE   3DG     32
CONECT      N9     3 C1'  C8   C4  
CONECT      C1'    4 N9   C2'  O4'  H1' 
CONECT      C2'    4 C1'  C3'  O2'  H2' 
CONECT      C3'    4 C2'  C4'  H3'1 H3'2
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C1'  C4' 
CONECT      C5'    4 C4'  O5'  H5'1 H5'2
CONECT      O5'    2 C5'  H5' 
CONECT      O2'    2 C2'  H1  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   O6   N1  
CONECT      O6     1 C6  
CONECT      N1     3 C6   C2   HN1 
CONECT      C2     3 N1   N2   N3  
CONECT      N2     3 C2   HN21 HN22
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'1   1 C3' 
CONECT      H3'2   1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H5'    1 O5' 
CONECT      H1     1 O2' 
CONECT      H8     1 C8  
CONECT      HN1    1 N1  
CONECT      HN21   1 N2  
CONECT      HN22   1 N2  
END   
HET    3DG             32
HETSYN     3DG 3-DEOXYGUANOSINE
HETNAM     3DG 9-(3-DEOXY-BETA-D-RIBOFURANOSYL)GUANINE
FORMUL      3DG    C10 H13 N5 O4

This OCA

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uses Jmol, developed by the Jmol Development Team (color reference)