Structure based on 1qum
Ideal structure
Name: 1',2'-dideoxyribofuranose-5'-phosphate
Formula: C5 H11 O6 P
Weight: 198.111
SMILES: "O[CH]1CCO[CH]1CO[P](O)(O)=O"
Spacial conformation based on PDB 1qum.
Also present in other 174 PDB entries.
RESIDUE   3DR     23
CONECT      O5'    2 P    C5' 
CONECT      P      4 O5'  OP1  OP2  OP3 
CONECT      OP1    1 P   
CONECT      OP2    2 P    HOP2
CONECT      OP3    2 P    HOP3
CONECT      C2'    4 C1'  C3'  H2'  H2''
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4'1
CONECT      O4'    2 C4'  C1' 
CONECT      C1'    4 C2'  O4'  H1'1 H1'2
CONECT      C3'    4 C2'  C4'  O3'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      HOP2   1 OP2 
CONECT      HOP3   1 OP3 
CONECT      H2'    1 C2' 
CONECT      H2''   1 C2' 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'1   1 C4' 
CONECT      H1'1   1 C1' 
CONECT      H1'2   1 C1' 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
END   
HET    3DR             23
HETSYN     3DR ABASIC DIDEOXYRIBOSE
HETNAM     3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE
FORMUL      3DR    C5 H11 O6 P1
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science