Structure based on 2gdd

Ideal structure
Name: benzyl {(1s)-5-amino-1-[(s)-hydroxy(5-{[4-(4-phenylbutanoyl)piperazin-1-yl]methyl}-1,2,4-oxadiazol-3-yl)methyl]pentyl}carbamate
Formula: C31 H42 N6 O5
Weight: 578.702
SMILES: "NCCCC[CH](NC(=O)OCc1ccccc1)[CH](O)c2noc(CN3CCN(CC3)C(=O)CCCc4ccccc4)n2"
Spacial conformation based on PDB 2gdd
RESIDUE   5AM     84
CONECT      C1     4 C8   O2   H11A H12A
CONECT      C3     3 O2   N4   O14 
CONECT      C7     3 N23  N20  C6  
CONECT      C8     3 C1   C9   C13 
CONECT      C9     3 C8   C10  H9  
CONECT      C10    3 C9   C11  H10 
CONECT      C11    3 C10  C12  H11 
CONECT      C12    3 C11  C13  H12 
CONECT      C13    3 C8   C12  H13 
CONECT      C15    4 C16  C5   H151 H152
CONECT      C16    4 C15  C17  H161 H162
CONECT      C22    3 N23  O21  C25 
CONECT      N23    2 C7   C22 
CONECT      N26    3 C27  C31  C25 
CONECT      C27    4 N26  C28  H271 H272
CONECT      N29    3 C30  C32  C28 
CONECT      C30    4 N29  C31  H301 H302
CONECT      C31    4 N26  C30  H311 H312
CONECT      C32    3 N29  C33  O34 
CONECT      C33    4 C32  C35  H331 H332
CONECT      C35    4 C33  C36  H351 H352
CONECT      O2     2 C1   C3  
CONECT      N4     3 C3   C5   HN4 
CONECT      C5     4 C15  N4   C6   H5  
CONECT      O14    1 C3  
CONECT      C17    4 C16  C18  H171 H172
CONECT      C18    4 C17  N19  H181 H182
CONECT      N19    3 C18  H191 H192
CONECT      N20    2 C7   O21 
CONECT      O21    2 C22  N20 
CONECT      O24    2 C6   HO24
CONECT      C25    4 C22  N26  H251 H252
CONECT      C28    4 C27  N29  H281 H282
CONECT      O34    1 C32 
CONECT      C36    4 C35  C37  H361 H362
CONECT      C37    3 C36  C38  C39 
CONECT      C38    3 C37  C40  H38 
CONECT      C39    3 C37  C41  H39 
CONECT      C40    3 C38  C42  H40 
CONECT      C41    3 C39  C42  H41 
CONECT      C42    3 C40  C41  H42 
CONECT      C6     4 C7   C5   O24  H6  
CONECT      H11A   1 C1  
CONECT      H12A   1 C1  
CONECT      H9     1 C9  
CONECT      H10    1 C10 
CONECT      H11    1 C11 
CONECT      H12    1 C12 
CONECT      H13    1 C13 
CONECT      H151   1 C15 
CONECT      H152   1 C15 
CONECT      H161   1 C16 
CONECT      H162   1 C16 
CONECT      H271   1 C27 
CONECT      H272   1 C27 
CONECT      H301   1 C30 
CONECT      H302   1 C30 
CONECT      H311   1 C31 
CONECT      H312   1 C31 
CONECT      H331   1 C33 
CONECT      H332   1 C33 
CONECT      H351   1 C35 
CONECT      H352   1 C35 
CONECT      HN4    1 N4  
CONECT      H5     1 C5  
CONECT      H171   1 C17 
CONECT      H172   1 C17 
CONECT      H181   1 C18 
CONECT      H182   1 C18 
CONECT      H191   1 N19 
CONECT      H192   1 N19 
CONECT      HO24   1 O24 
CONECT      H251   1 C25 
CONECT      H252   1 C25 
CONECT      H281   1 C28 
CONECT      H282   1 C28 
CONECT      H361   1 C36 
CONECT      H362   1 C36 
CONECT      H38    1 C38 
CONECT      H39    1 C39 
CONECT      H40    1 C40 
CONECT      H41    1 C41 
CONECT      H42    1 C42 
CONECT      H6     1 C6  
END   
HET    5AM             84
HETNAM     5AM BENZYL {(1S)-5-AMINO-1-[(S)-HYDROXY(5-{[4-(4-PHENYLBUTA
HETNAM   2 5AM NOYL)PIPERAZIN-1-YL]METHYL}-1,2,4-OXADIAZOL-3-YL)METHYL
HETNAM   3 5AM ]PENTYL}CARBAMATE
FORMUL      5AM    C31 H42 N6 O5

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science