Structure based on 1o38

Ideal structure
Name: 5-(2-aminoethyl)-3-{5-[amino(iminio)methyl]-1h-benzimidazol-2-yl}-1,1'-biphenyl-2-olate
Formula: C22 H22 N5 O
Weight: 372.443
SMILES: "NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(CC[NH3+])cc(c3[O-])c4ccccc4"
Spacial conformation based on PDB 1o38.
Also present on 1o37
RESIDUE   653     50
CONECT      C1     3 C2   C6   C7  
CONECT      C2     3 C1   C3   HC2 
CONECT      C3     3 C2   C4   HC3 
CONECT      C4     3 C3   C5   N3  
CONECT      C5     3 C4   C6   N4  
CONECT      C6     3 C1   C5   HC6 
CONECT      C7     3 C1   N1   N2  
CONECT      N1     3 C7   HH11 HH12
CONECT      N2     3 C7   HH21 HH22
CONECT      N3     3 C4   C8   HN3 
CONECT      N4     2 C5   C8  
CONECT      C8     3 N3   N4   C1' 
CONECT      C1'    3 C8   C2'  C6' 
CONECT      C2'    3 C1'  C3'  HC2'
CONECT      C3'    3 C2'  CV'  C4' 
CONECT      CV'    4 C3'  CW'  H31A H31B
CONECT      CW'    4 CV'  NX'  H32A H32B
CONECT      NX'    4 CW'  H33A H33B H33C
CONECT      C4'    3 C3'  C5'  HC4'
CONECT      C5'    3 C4'  C6'  C1B 
CONECT      C6'    3 C1'  C5'  O6' 
CONECT      O6'    1 C6' 
CONECT      C1B    3 C5'  C2B  C6B 
CONECT      C2B    3 C1B  C3B  H2B 
CONECT      C3B    3 C2B  C4B  H3B 
CONECT      C4B    3 C3B  C5B  H4B 
CONECT      C5B    3 C4B  C6B  H5B 
CONECT      C6B    3 C1B  C5B  H6B 
CONECT      HC2    1 C2  
CONECT      HC3    1 C3  
CONECT      HC6    1 C6  
CONECT      HH11   1 N1  
CONECT      HH12   1 N1  
CONECT      HH21   1 N2  
CONECT      HH22   1 N2  
CONECT      HN3    1 N3  
CONECT      HC2'   1 C2' 
CONECT      H31A   1 CV' 
CONECT      H31B   1 CV' 
CONECT      H32A   1 CW' 
CONECT      H32B   1 CW' 
CONECT      H33A   1 NX' 
CONECT      H33B   1 NX' 
CONECT      H33C   1 NX' 
CONECT      HC4'   1 C4' 
CONECT      H2B    1 C2B 
CONECT      H3B    1 C3B 
CONECT      H4B    1 C4B 
CONECT      H5B    1 C5B 
CONECT      H6B    1 C6B 
END   
HET    653             50
HETSYN     653 CRA_23653
HETNAM     653 5-(2-AMINOETHYL)-3-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMID
HETNAM   2 653 AZOL-2-YL}-1,1'-BIPHENYL-2-OLATE
FORMUL      653    C22 H22 N5 O1 1+

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science