Structure based on 1o38 | Ideal structure |
|
Name: 5-(2-aminoethyl)-3-{5-[amino(iminio)methyl]-1h-benzimidazol-2-yl}-1,1'-biphenyl-2-olate |
Formula: C22 H22 N5 O |
Weight: 372.443 |
SMILES: "NC(=[NH2+])c1ccc2[nH]c(nc2c1)c3cc(CC[NH3+])cc(c3[O-])c4ccccc4" |
Spacial conformation based on PDB
1o38. Also present on 1o37 |
RESIDUE 653 50
CONECT C1 3 C2 C6 C7
CONECT C2 3 C1 C3 HC2
CONECT C3 3 C2 C4 HC3
CONECT C4 3 C3 C5 N3
CONECT C5 3 C4 C6 N4
CONECT C6 3 C1 C5 HC6
CONECT C7 3 C1 N1 N2
CONECT N1 3 C7 HH11 HH12
CONECT N2 3 C7 HH21 HH22
CONECT N3 3 C4 C8 HN3
CONECT N4 2 C5 C8
CONECT C8 3 N3 N4 C1'
CONECT C1' 3 C8 C2' C6'
CONECT C2' 3 C1' C3' HC2'
CONECT C3' 3 C2' CV' C4'
CONECT CV' 4 C3' CW' H31A H31B
CONECT CW' 4 CV' NX' H32A H32B
CONECT NX' 4 CW' H33A H33B H33C
CONECT C4' 3 C3' C5' HC4'
CONECT C5' 3 C4' C6' C1B
CONECT C6' 3 C1' C5' O6'
CONECT O6' 1 C6'
CONECT C1B 3 C5' C2B C6B
CONECT C2B 3 C1B C3B H2B
CONECT C3B 3 C2B C4B H3B
CONECT C4B 3 C3B C5B H4B
CONECT C5B 3 C4B C6B H5B
CONECT C6B 3 C1B C5B H6B
CONECT HC2 1 C2
CONECT HC3 1 C3
CONECT HC6 1 C6
CONECT HH11 1 N1
CONECT HH12 1 N1
CONECT HH21 1 N2
CONECT HH22 1 N2
CONECT HN3 1 N3
CONECT HC2' 1 C2'
CONECT H31A 1 CV'
CONECT H31B 1 CV'
CONECT H32A 1 CW'
CONECT H32B 1 CW'
CONECT H33A 1 NX'
CONECT H33B 1 NX'
CONECT H33C 1 NX'
CONECT HC4' 1 C4'
CONECT H2B 1 C2B
CONECT H3B 1 C3B
CONECT H4B 1 C4B
CONECT H5B 1 C5B
CONECT H6B 1 C6B
END
HET 653 50
HETSYN 653 CRA_23653
HETNAM 653 5-(2-AMINOETHYL)-3-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMID
HETNAM 2 653 AZOL-2-YL}-1,1'-BIPHENYL-2-OLATE
FORMUL 653 C22 H22 N5 O1 1+