Structure based on 1cvr

Ideal structure
Name: deoxy-chloromethyl-arginine
Formula: C7 H15 Cl N4 O
Weight: 206.673
SMILES: "N[CH](CCCNC(N)=N)C(=O)CCl"
Spacial conformation based on PDB 1cvr
RESIDUE   ACL     28
CONECT      N      3 CA   H    H2  
CONECT      CA     4 N    CB   C    HA  
CONECT      CB     4 CA   CG   HB2  HB3 
CONECT      CG     4 CB   CD   HG2  HG3 
CONECT      CD     4 CG   NE   HD2  HD3 
CONECT      NE     3 CD   CZ   HE  
CONECT      CZ     3 NE   NH1  NH2 
CONECT      NH1    2 CZ   HH1 
CONECT      NH2    3 CZ   HH21 HH22
CONECT      C      3 CA   O    CM  
CONECT      O      1 C   
CONECT      CM     4 C    CL   HM1  HM2 
CONECT      CL     1 CM  
CONECT      H      1 N   
CONECT      H2     1 N   
CONECT      HA     1 CA  
CONECT      HB2    1 CB  
CONECT      HB3    1 CB  
CONECT      HG2    1 CG  
CONECT      HG3    1 CG  
CONECT      HD2    1 CD  
CONECT      HD3    1 CD  
CONECT      HE     1 NE  
CONECT      HH1    1 NH1 
CONECT      HH21   1 NH2 
CONECT      HH22   1 NH2 
CONECT      HM1    1 CM  
CONECT      HM2    1 CM  
END   
HET    ACL             28
HETNAM     ACL DEOXY-CHLOROMETHYL-ARGININE
FORMUL      ACL    C7 H15 Cl1 N4 O1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science