Hetgroup: ADT

Structure based on 8rsa

Ideal structure

Name: 3'-deoxy-3'-acetamido-thymidine

Formula: C12 H17 N3 O5

Weight: 283.280

SMILES: "CC(=O)N[CH]1C[CH](O[CH]1CO)N2C=C(C)C(=O)NC2=O"

Spacial conformation based on PDB 8rsa

RESIDUE   ADT     37
CONECT      N1     3 C2   C6   C1' 
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     3 C2   C4   HN3 
CONECT      C4     3 N3   O4   C5  
CONECT      O4     1 C4  
CONECT      C5     3 C4   C5M  C6  
CONECT      C5M    4 C5   HM51 HM52 HM53
CONECT      C6     3 N1   C5   H6  
CONECT      C1'    4 N1   O4'  C2'  H1' 
CONECT      O4'    2 C1'  C4' 
CONECT      C4'    4 O4'  C5'  C3'  H4' 
CONECT      C5'    4 C4'  O5'  H5'1 H5'2
CONECT      O5'    2 C5'  HO5'
CONECT      C3'    4 C4'  N3'  C2'  H3' 
CONECT      N3'    3 C3'  C8'  HN3'
CONECT      C8'    3 N3'  O8'  C9' 
CONECT      O8'    1 C8' 
CONECT      C9'    4 C8'  H9'1 H9'2 H9'3
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      HN3    1 N3  
CONECT      HM51   1 C5M 
CONECT      HM52   1 C5M 
CONECT      HM53   1 C5M 
CONECT      H6     1 C6  
CONECT      H1'    1 C1' 
CONECT      H4'    1 C4' 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      HO5'   1 O5' 
CONECT      H3'    1 C3' 
CONECT      HN3'   1 N3' 
CONECT      H9'1   1 C9' 
CONECT      H9'2   1 C9' 
CONECT      H9'3   1 C9' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
END   
HET    ADT             37
HETSYN     ADT ((((3'-DEOXY-3'-THYMIDINYL)-AMINO)CARBONYL)METHYL)
HETNAM     ADT 3'-DEOXY-3'-ACETAMIDO-THYMIDINE
FORMUL      ADT    C12 H17 N3 O5

This OCA

MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)