Structure based on ?

Ideal structure
Name: 9-deoxy-9-amino-2-o-methyl-5-n-acetyl-alpha-d-neuraminic acid
Formula: C12 H22 N2 O8
Weight: 322.312
SMILES: "CO[C]1(C[CH](O)[CH](NC(C)=O)[CH](O1)[CH](O)[CH](O)CN)C(O)=O"
Spacial conformation based on PDB ?.
Also present on 1hgj
RESIDUE   AMN     44
CONECT      C1     3 C2   O1A  O1B 
CONECT      C2     4 C1   C3   O2   O6  
CONECT      C3     4 C2   C4   H32  H31 
CONECT      C4     4 C3   C5   O4   H4  
CONECT      C5     4 C4   C6   N5   H5  
CONECT      C6     4 C5   C7   O6   H6  
CONECT      C7     4 C6   C8   O7   H7  
CONECT      C8     4 C7   C9   O8   H8  
CONECT      C9     4 C8   N9   H92  H91 
CONECT      C10    3 C11  N5   O10 
CONECT      C11    4 C10  H111 H113 H112
CONECT      C12    4 O2   H121 H122 H123
CONECT      N5     3 C5   C10  HN5 
CONECT      N9     3 C9   HN91 HN92
CONECT      O1A    1 C1  
CONECT      O1B    2 C1   HO1B
CONECT      O2     2 C2   C12 
CONECT      O4     2 C4   HO4 
CONECT      O6     2 C2   C6  
CONECT      O7     2 C7   HO7 
CONECT      O8     2 C8   HO8 
CONECT      O10    1 C10 
CONECT      H32    1 C3  
CONECT      H31    1 C3  
CONECT      H4     1 C4  
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      H7     1 C7  
CONECT      H8     1 C8  
CONECT      H92    1 C9  
CONECT      H91    1 C9  
CONECT      H111   1 C11 
CONECT      H113   1 C11 
CONECT      H112   1 C11 
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H123   1 C12 
CONECT      HN5    1 N5  
CONECT      HN91   1 N9  
CONECT      HN92   1 N9  
CONECT      HO1B   1 O1B 
CONECT      HO4    1 O4  
CONECT      HO7    1 O7  
CONECT      HO8    1 O8  
END   
HET    AMN             44
HETSYN     AMN 9-DEOXY-9-AMINO-2-O-METHYL-5-N-ACETYL-ALPHA-D-NEURAMINI
HETSYN   2 AMN C ACID; methyl 5-acetamido-9-amino-3,5,9-trideoxy-D-gly
HETSYN   3 AMN cero-alpha-D-galacto-non-2-ulosidonic acid; methyl 5-ac
HETSYN   4 AMN etamido-9-amino-3,5,9-trideoxy-D-glycero-D-galacto-non-
HETSYN   5 AMN 2-ulosidonic acid; methyl 5-acetamido-9-amino-3,5,9-tri
HETSYN   6 AMN deoxy-D-glycero-galacto-non-2-ulosidonic acid
HETNAM     AMN methyl 5-acetamido-9-amino-3,5,9-trideoxy-D-glycero-alp
HETNAM   2 AMN ha-D-galacto-non-2-ulopyranosidonic acid
FORMUL      AMN    C12 H22 N2 O8

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science