MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 5'-o-[(s)-{[(5s)-5-amino-6-oxohexyl]amino}(hydroxy)phosphoryl]adenosine | ||
| Formula: C16 H26 N7 O7 P | ||
| Weight: 459.394 | ||
| SMILES: "N[CH](CCCCN[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C=O" | ||
| Spacial conformation based on PDB
1vs0. Also present on 2hvq, 5d1o, 5d1p, 6n0v |
RESIDUE APK 57
CONECT O 1 C
CONECT C 3 O CA HC
CONECT CA 4 C N CB HA
CONECT N 3 CA H H2
CONECT CB 4 CA CG HB2 HB3
CONECT CG 4 CB CD HG2 HG3
CONECT CD 4 CG CE HD2 HD3
CONECT CE 4 CD NZ HE2 HE3
CONECT NZ 3 CE P HZ
CONECT P 4 NZ O1P O2P O5'
CONECT O1P 1 P
CONECT O2P 2 P HO2P
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5'1 H5'2
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C3' 4 C4' O3' C2' H3'
CONECT O3' 2 C3' HO3'
CONECT C2' 4 C3' O2' C1' H2'
CONECT O2' 2 C2' HO2'
CONECT C1' 4 O4' C2' N9 H1'
CONECT N9 3 C1' C8 C4
CONECT C8 3 N9 N7 H8
CONECT N7 2 C8 C5
CONECT C5 3 N7 C4 C6
CONECT C4 3 N9 C5 N3
CONECT N3 2 C4 C2
CONECT C2 3 N3 N1 HC2
CONECT N1 2 C2 C6
CONECT C6 3 C5 N1 N6
CONECT N6 3 C6 HN61 HN62
CONECT HC 1 C
CONECT HA 1 CA
CONECT H 1 N
CONECT H2 1 N
CONECT HB2 1 CB
CONECT HB3 1 CB
CONECT HG2 1 CG
CONECT HG3 1 CG
CONECT HD2 1 CD
CONECT HD3 1 CD
CONECT HE2 1 CE
CONECT HE3 1 CE
CONECT HZ 1 NZ
CONECT HO2P 1 O2P
CONECT H5'1 1 C5'
CONECT H5'2 1 C5'
CONECT H4' 1 C4'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H2' 1 C2'
CONECT HO2' 1 O2'
CONECT H1' 1 C1'
CONECT H8 1 C8
CONECT HC2 1 C2
CONECT HN61 1 N6
CONECT HN62 1 N6
END
HET APK 57
HETNAM APK 5'-O-[(S)-{[(5S)-5-AMINO-6-OXOHEXYL]AMINO}(HYDROXY)PHOS
HETNAM 2 APK PHORYL]ADENOSINE
FORMUL APK C16 H26 N7 O7 P1
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This OCA
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