Structure based on 1mdt

Ideal structure
Name: adenylyl-3'-5'-phospho-uridine-3'-monophosphate
Formula: C19 H25 N7 O15 P2
Weight: 653.387
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O[P](O)(O)=O)N5C=CC(=O)NC5=O)[CH]3O"
Spacial conformation based on PDB 1mdt.
Also present on 1ddt, 1dtp, 1f0l, 8g0g
RESIDUE   APU     68
CONECT      PA     4 O1A  O2A  O3B  O5D 
CONECT      O1A    1 PA  
CONECT      O2A    2 PA   HOA2
CONECT      O5B    2 C5B  HO5A
CONECT      C5B    4 O5B  C4B  H51A H52A
CONECT      C4B    4 C5B  O4B  C3B  H4B 
CONECT      O4B    2 C4B  C1B 
CONECT      C3B    4 C4B  O3B  C2B  H3B 
CONECT      O3B    2 PA   C3B 
CONECT      C2B    4 C3B  O2B  C1B  H2B 
CONECT      O2B    2 C2B  HO2A
CONECT      C1B    4 O4B  C2B  N9A  H1B 
CONECT      N9A    3 C1B  C8A  C4A 
CONECT      C8A    3 N9A  N7A  H8A 
CONECT      N7A    2 C8A  C5A 
CONECT      C5A    3 N7A  C6A  C4A 
CONECT      C6A    3 C5A  N6A  N1A 
CONECT      N6A    3 C6A  H61A H62A
CONECT      N1A    2 C6A  C2A 
CONECT      C2A    3 N1A  N3A  H2A 
CONECT      N3A    2 C2A  C4A 
CONECT      C4A    3 N9A  C5A  N3A 
CONECT      N1U    3 C2U  C6U  C1D 
CONECT      C2U    3 N1U  O2U  N3U 
CONECT      O2U    1 C2U 
CONECT      N3U    3 C2U  C4U  H3U 
CONECT      C4U    3 N3U  O4U  C5U 
CONECT      O4U    1 C4U 
CONECT      C5U    3 C4U  C6U  H5U 
CONECT      C6U    3 N1U  C5U  H6U 
CONECT      C1D    4 N1U  C2D  O4D  H1D 
CONECT      C2D    4 C1D  O2D  C3D  H2D 
CONECT      O2D    2 C2D  HO2'
CONECT      C3D    4 C2D  O3D  C4D  H3D 
CONECT      O3D    2 C3D  PU  
CONECT      C4D    4 C3D  O4D  C5D  H4D 
CONECT      O4D    2 C1D  C4D 
CONECT      O5D    2 PA   C5D 
CONECT      C5D    4 C4D  O5D  H51U H52U
CONECT      PU     4 O3D  O1X  O2X  O3X 
CONECT      O1X    1 PU  
CONECT      O2X    2 PU   HO2U
CONECT      O3X    2 PU   HO3U
CONECT      HOA2   1 O2A 
CONECT      HO5A   1 O5B 
CONECT      H51A   1 C5B 
CONECT      H52A   1 C5B 
CONECT      H4B    1 C4B 
CONECT      H3B    1 C3B 
CONECT      H2B    1 C2B 
CONECT      HO2A   1 O2B 
CONECT      H1B    1 C1B 
CONECT      H8A    1 C8A 
CONECT      H61A   1 N6A 
CONECT      H62A   1 N6A 
CONECT      H2A    1 C2A 
CONECT      H3U    1 N3U 
CONECT      H5U    1 C5U 
CONECT      H6U    1 C6U 
CONECT      H1D    1 C1D 
CONECT      H2D    1 C2D 
CONECT      HO2'   1 O2D 
CONECT      H3D    1 C3D 
CONECT      H4D    1 C4D 
CONECT      H51U   1 C5D 
CONECT      H52U   1 C5D 
CONECT      HO2U   1 O2X 
CONECT      HO3U   1 O3X 
END   
HET    APU             68
HETNAM     APU ADENYLYL-3'-5'-PHOSPHO-URIDINE-3'-MONOPHOSPHATE
FORMUL      APU    C19 H25 N7 O15 P2

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science