Structure based on 16pk

Ideal structure
Name: 1,1,5,5-tetrafluorophosphopentylphosphonic acid adenylate ester
Formula: C15 H22 F4 N5 O12 P3
Weight: 633.276
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)C(F)(F)CCCC(F)(F)[P](O)(O)=O)[CH](O)[CH]3O"
Spacial conformation based on PDB 16pk
RESIDUE   BIS     61
CONECT      PB     4 O2B  O3B  O3A  C11 
CONECT      O2B    2 PB   HO2B
CONECT      O3B    1 PB  
CONECT      PA     4 O1A  O2A  O3A  O5' 
CONECT      O1A    2 PA   HO1A
CONECT      O2A    1 PA  
CONECT      O3A    2 PB   PA  
CONECT      O5'    2 PA   C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HO'3
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO'2
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   N6   N1  
CONECT      N6     3 C6   HN61 HN62
CONECT      N1     2 C6   C2  
CONECT      C2     3 N1   N3   H2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      C11    4 PB   F11  F12  C12 
CONECT      F11    1 C11 
CONECT      F12    1 C11 
CONECT      C12    4 C11  C13  H121 H122
CONECT      C13    4 C12  C14  H131 H132
CONECT      C14    4 C13  C15  H141 H142
CONECT      C15    4 C14  F51  F52  PN  
CONECT      F51    1 C15 
CONECT      F52    1 C15 
CONECT      PN     4 C15  ON1  ON2  ON3 
CONECT      ON1    2 PN   HO1 
CONECT      ON2    2 PN   HO2 
CONECT      ON3    1 PN  
CONECT      HO2B   1 O2B 
CONECT      HO1A   1 O1A 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HO'3   1 O3' 
CONECT      H2'    1 C2' 
CONECT      HO'2   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
CONECT      H2     1 C2  
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H131   1 C13 
CONECT      H132   1 C13 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      HO1    1 ON1 
CONECT      HO2    1 ON2 
END   
HET    BIS             61
HETNAM     BIS 1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLA
HETNAM   2 BIS TE ESTER
FORMUL      BIS    C15 H22 F4 N5 O12 P3

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science