Structure based on 1od9 | Ideal structure |
|
Name: me-a-n-benzoyl-amino-9-deoxy-neu5ac |
Formula: C19 H26 N2 O9 |
Weight: 426.418 |
SMILES: "CO[C]1(C[CH](O)[CH](NC(C)=O)[CH](O1)[CH](O)[CH](O)CNC(=O)c2ccccc2)C(O)=O" |
Spacial conformation based on PDB
1od9 |
RESIDUE BND 56
CONECT CY1 4 O2 HY11 HY12 HY13
CONECT C1 3 O1A O1B C2
CONECT O1A 1 C1
CONECT O1B 2 C1 HO1B
CONECT C2 4 C1 O2 C3 O6
CONECT O2 2 CY1 C2
CONECT C3 4 C2 C4 H32 H31
CONECT C4 4 C3 O4 C5 H4
CONECT O4 2 C4 HO4
CONECT C5 4 C4 N5 C6 H5
CONECT N5 3 C5 C10 HN5
CONECT C10 3 N5 O10 C11
CONECT O10 1 C10
CONECT C11 4 C10 H111 H113 H112
CONECT C6 4 C5 O6 C7 H6
CONECT O6 2 C2 C6
CONECT C7 4 C6 O7 C8 H7
CONECT O7 2 C7 HO7
CONECT C8 4 C7 O8 C9 H8
CONECT O8 2 C8 HO8
CONECT C9 4 C8 NX6 H92 H91
CONECT NX6 3 C9 C12 HE
CONECT C12 3 NX6 O12 C1G
CONECT O12 1 C12
CONECT C1G 3 C12 CD1 CD2
CONECT CD1 3 C1G CE1 HD1
CONECT CE1 3 CD1 C1Z HE1
CONECT CD2 3 C1G CE2 HD2
CONECT CE2 3 CD2 C1Z HE2
CONECT C1Z 3 CE1 CE2 H1Z
CONECT HY11 1 CY1
CONECT HY12 1 CY1
CONECT HY13 1 CY1
CONECT HO1B 1 O1B
CONECT H32 1 C3
CONECT H31 1 C3
CONECT H4 1 C4
CONECT HO4 1 O4
CONECT H5 1 C5
CONECT HN5 1 N5
CONECT H111 1 C11
CONECT H113 1 C11
CONECT H112 1 C11
CONECT H6 1 C6
CONECT H7 1 C7
CONECT HO7 1 O7
CONECT H8 1 C8
CONECT HO8 1 O8
CONECT H92 1 C9
CONECT H91 1 C9
CONECT HE 1 NX6
CONECT HD1 1 CD1
CONECT HE1 1 CE1
CONECT HD2 1 CD2
CONECT HE2 1 CE2
CONECT H1Z 1 C1Z
END
HET BND 56
HETSYN BND ME-A-N-BENZOYL-AMINO-9-DEOXY-NEU5AC; methyl 5-acetamido
HETSYN 2 BND -3,5,9-trideoxy-9-[(phenylcarbonyl)amino]-D-glycero-alp
HETSYN 3 BND ha-D-galacto-non-2-ulosidonic acid; methyl 5-acetamido-
HETSYN 4 BND 3,5,9-trideoxy-9-[(phenylcarbonyl)amino]-D-glycero-D-ga
HETSYN 5 BND lacto-non-2-ulosidonic acid; methyl 5-acetamido-3,5,9-t
HETSYN 6 BND rideoxy-9-[(phenylcarbonyl)amino]-D-glycero-galacto-non
HETSYN 7 BND -2-ulosidonic acid
HETNAM BND methyl 5-acetamido-3,5,9-trideoxy-9-[(phenylcarbonyl)am
HETNAM 2 BND ino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic a
HETNAM 3 BND cid
FORMUL BND C19 H26 N2 O9