Structure based on 1wqw

Ideal structure
Name: biotinyl-5-amp
Formula: C20 H28 N7 O9 P S
Weight: 573.517
SMILES: "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC(=O)CCCC[CH]4SC[CH]5NC(=O)N[CH]45)[CH](O)[CH]3O"
Spacial conformation based on PDB 1wqw.
Also present in other 12 PDB entries.
RESIDUE   BT5     66
CONECT      CBB    3 OBB  OCB  CAB 
CONECT      OBB    2 CBB  P   
CONECT      OCB    1 CBB 
CONECT      CAB    4 CBB  C9B  H101 H102
CONECT      C9B    4 CAB  C8B  H9B1 H9B2
CONECT      C8B    4 C9B  C7B  H8B1 H8B2
CONECT      C7B    4 C8B  C2B  H7B1 H7B2
CONECT      C2B    4 C7B  S1B  C4B  H2B 
CONECT      S1B    2 C2B  C6B 
CONECT      C6B    4 S1B  C5B  H6B1 H6B2
CONECT      C5B    4 C6B  N1B  C4B  H5B 
CONECT      N1B    3 C5B  C3B  H1B 
CONECT      C3B    3 N1B  O3B  N2B 
CONECT      O3B    1 C3B 
CONECT      N2B    3 C3B  C4B  H4  
CONECT      C4B    4 C2B  C5B  N2B  H4B 
CONECT      P      4 OBB  OP1  OP2  O5' 
CONECT      OP1    1 P   
CONECT      OP2    2 P    H2P 
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  H2  
CONECT      C2'    4 C3'  O2'  C1'  H1  
CONECT      O2'    2 C2'  H2' 
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   N6   N1  
CONECT      N6     3 C6   HN61 HN62
CONECT      N1     2 C6   C2  
CONECT      C2     3 N1   N3   H3  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      H101   1 CAB 
CONECT      H102   1 CAB 
CONECT      H9B1   1 C9B 
CONECT      H9B2   1 C9B 
CONECT      H8B1   1 C8B 
CONECT      H8B2   1 C8B 
CONECT      H7B1   1 C7B 
CONECT      H7B2   1 C7B 
CONECT      H2B    1 C2B 
CONECT      H6B1   1 C6B 
CONECT      H6B2   1 C6B 
CONECT      H5B    1 C5B 
CONECT      H1B    1 N1B 
CONECT      H4     1 N2B 
CONECT      H4B    1 C4B 
CONECT      H2P    1 OP2 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      H2     1 O3' 
CONECT      H1     1 C2' 
CONECT      H2'    1 O2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
CONECT      H3     1 C2  
END   
HET    BT5             66
HETNAM     BT5 BIOTINYL-5-AMP
FORMUL      BT5    C20 H28 N7 O9 P1 S1

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science