Structure based on 2bxt

Ideal structure
Name: 6-chloro-1-(2-{[(5-chloro-1-benzothien-3-yl)methyl]amino}ethyl)-3-[(2-pyridin-2-ylethyl)amino]-1,4-dihydropyrazin-2-ol
Formula: C22 H31 Cl2 N5 O S
Weight: 484.485
SMILES: "O[CH]1N(CCNCc2csc3ccc(Cl)cc23)[CH](Cl)CN=C1NCC[CH]4CCCCN4"
Spacial conformation based on PDB 2bxt
RESIDUE   C2D     62
CONECT      O1     2 C20  H1  
CONECT      CL2    1 C6  
CONECT      CL3    1 C17 
CONECT      C4     3 C5   C6   H4  
CONECT      C5     3 C4   C7   H5  
CONECT      C6     3 CL2  C4   C8  
CONECT      C7     3 C5   C9   S10 
CONECT      C8     3 C6   C9   H8  
CONECT      C9     3 C7   C8   C12 
CONECT      S10    2 C7   C11 
CONECT      C11    3 S10  C12  H11 
CONECT      C12    3 C9   C11  C13 
CONECT      C13    4 C12  N14  H131 H132
CONECT      N14    3 C13  C15  H14 
CONECT      C15    4 N14  C16  H151 H152
CONECT      C16    4 C15  N18  H161 H162
CONECT      C17    4 CL3  N18  C19  H117
CONECT      N18    3 C16  C17  C20 
CONECT      C19    4 C17  N21  H19  H191
CONECT      C20    4 O1   N18  C22  H220
CONECT      N21    2 C19  C22 
CONECT      C22    3 C20  N21  N23 
CONECT      N23    3 C22  C24  H23 
CONECT      C24    4 N23  C25  H241 H242
CONECT      C25    4 C24  C27  H251 H252
CONECT      C26    4 C27  C28  H26  H261
CONECT      C27    4 C25  C26  N29  H227
CONECT      C28    4 C26  C30  H28  H281
CONECT      N29    3 C27  C31  HN1 
CONECT      C30    4 C28  C31  H30  H301
CONECT      C31    4 N29  C30  H31  H311
CONECT      H1     1 O1  
CONECT      H4     1 C4  
CONECT      H5     1 C5  
CONECT      H8     1 C8  
CONECT      H11    1 C11 
CONECT      H131   1 C13 
CONECT      H132   1 C13 
CONECT      H14    1 N14 
CONECT      H151   1 C15 
CONECT      H152   1 C15 
CONECT      H161   1 C16 
CONECT      H162   1 C16 
CONECT      H117   1 C17 
CONECT      H19    1 C19 
CONECT      H191   1 C19 
CONECT      H220   1 C20 
CONECT      H23    1 N23 
CONECT      H241   1 C24 
CONECT      H242   1 C24 
CONECT      H251   1 C25 
CONECT      H252   1 C25 
CONECT      H26    1 C26 
CONECT      H261   1 C26 
CONECT      H227   1 C27 
CONECT      H28    1 C28 
CONECT      H281   1 C28 
CONECT      H30    1 C30 
CONECT      H301   1 C30 
CONECT      H31    1 C31 
CONECT      H311   1 C31 
CONECT      HN1    1 N29 
END   
HET    C2D             62
HETNAM     C2D 6-CHLORO-1-(2-{[(5-CHLORO-1-BENZOTHIEN-3-YL)METHYL]AMIN
HETNAM   2 C2D O}ETHYL)-3-[(2-PYRIDIN-2-YLETHYL)AMINO]-1,4-DIHYDROPYRA
HETNAM   3 C2D ZIN-2-OL
FORMUL      C2D    C22 H31 Cl2 N5 O1 S1

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science