Structure based on 417d | Ideal structure |
|
Name: 6h,8h-3,4-dihydropyrimido[4,5-c][1,2]oxazin-7-0ne(cytidine)-5'-monophosphate |
Formula: C11 H16 N3 O8 P |
Weight: 349.234 |
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=C3CCONC3=NC2=O" |
Spacial conformation based on PDB
417d. Also present on 223d |
RESIDUE C46 39
CONECT P 4 O1P O2P O3P O5'
CONECT O1P 2 P H1P
CONECT O2P 1 P
CONECT O3P 2 P H3P
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5'1 H5'2
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C3' 4 C4' O3' C2' H3'
CONECT O3' 2 C3' HA
CONECT C2' 4 C3' C1' H2'1 H2'2
CONECT C1' 4 O4' C2' N1 H1'
CONECT N1 3 C1' C2 C6
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 2 C2 C4
CONECT C4 3 N3 N4 C5
CONECT N4 3 C4 O4 H4
CONECT C5 3 C4 C6 CM5
CONECT C6 3 N1 C5 H6
CONECT CM5 4 C5 C7 HM51 HM52
CONECT O4 2 N4 C7
CONECT C7 4 CM5 O4 H7C1 H7C2
CONECT H1P 1 O1P
CONECT H3P 1 O3P
CONECT H5'1 1 C5'
CONECT H5'2 1 C5'
CONECT H4' 1 C4'
CONECT H3' 1 C3'
CONECT HA 1 O3'
CONECT H2'1 1 C2'
CONECT H2'2 1 C2'
CONECT H1' 1 C1'
CONECT H4 1 N4
CONECT H6 1 C6
CONECT HM51 1 CM5
CONECT HM52 1 CM5
CONECT H7C1 1 C7
CONECT H7C2 1 C7
END
HET C46 39
HETNAM C46 6H,8H-3,4-DIHYDROPYRIMIDO[4,5-C][1,2]OXAZIN-7-0NE(CYTID
HETNAM 2 C46 INE)-5'-MONOPHOSPHATE
FORMUL C46 C11 H16 N3 O8 P1