Structure based on 1p1y

Ideal structure
Name: phosphoric acid mono-[5-(4-amino-5-bromo-2-oxo-2h-pyrimidin-1-yl)-3,4-dihydroxy-tetrahydro-furan-2-ylmethyl] ester
Formula: C9 H13 Br N3 O8 P
Weight: 402.093
SMILES: "NC1=NC(=O)N(C=C1Br)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O"
Spacial conformation based on PDB 1p1y
RESIDUE   CB2     35
CONECT      O3'    2 C3'  HO3'
CONECT      C3'    4 O3'  C2'  C4'  H3' 
CONECT      C2'    4 C3'  O2'  C1'  H2' 
CONECT      O2'    2 C2'  HO2'
CONECT      C1'    4 C2'  O4'  N1   H1' 
CONECT      O4'    2 C1'  C4' 
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      C5'    4 C4'  O5'  H5'  H5''
CONECT      O5'    2 C5'  P   
CONECT      P      4 O5'  OP1  OP2  OP3 
CONECT      OP1    1 P   
CONECT      OP2    2 P    H2P 
CONECT      OP3    2 P    H3P 
CONECT      N1     3 C1'  C6   C2  
CONECT      C6     3 N1   C5   H6  
CONECT      C5     3 C6   BR   C4  
CONECT      BR     1 C5  
CONECT      C4     3 C5   N3   N4  
CONECT      N3     2 C4   C2  
CONECT      C2     3 N1   N3   O2  
CONECT      O2     1 C2  
CONECT      N4     3 C4   HN41 HN42
CONECT      HO3'   1 O3' 
CONECT      H3'    1 C3' 
CONECT      H2'    1 C2' 
CONECT      HO2'   1 O2' 
CONECT      H1'    1 C1' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H2P    1 OP2 
CONECT      H3P    1 OP3 
CONECT      H6     1 C6  
CONECT      HN41   1 N4  
CONECT      HN42   1 N4  
END   
HET    CB2             35
HETSYN     CB2 5-BROMO-CYTIDINEMONOPHOSPHATE
HETNAM     CB2 PHOSPHORIC ACID MONO-[5-(4-AMINO-5-BROMO-2-OXO-2H-PYRIM
HETNAM   2 CB2 IDIN-1-YL)-3,4-DIHYDROXY-TETRAHYDRO-FURAN-2-YLMETHYL] E
HETNAM   3 CB2 STER
FORMUL      CB2    C9 H13 Br1 N3 O8 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science