Structure based on 1qye

Ideal structure
Name: 2-chlorodideoxyadenosine
Formula: C10 H12 Cl N5 O2
Weight: 269.688
SMILES: "Nc1nc(Cl)nc2n(cnc12)[CH]3CC[CH](CO)O3"
Spacial conformation based on PDB 1qye
RESIDUE   CDY     30
CONECT      O5'    2 C5'  HO5 
CONECT      C5'    4 O5'  C4'  HC51 HC52
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  C2'  HC31 HC32
CONECT      C2'    4 C3'  C1'  HC21 HC22
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   HC8 
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C4   C6  
CONECT      C4     3 N9   C5   N3  
CONECT      N3     2 C4   C2  
CONECT      C2     3 N3   CL   N1  
CONECT      CL     1 C2  
CONECT      N1     2 C2   C6  
CONECT      C6     3 C5   N1   N6  
CONECT      N6     3 C6   HN61 HN62
CONECT      HO5    1 O5' 
CONECT      HC51   1 C5' 
CONECT      HC52   1 C5' 
CONECT      H4'    1 C4' 
CONECT      HC31   1 C3' 
CONECT      HC32   1 C3' 
CONECT      HC21   1 C2' 
CONECT      HC22   1 C2' 
CONECT      H1'    1 C1' 
CONECT      HC8    1 C8  
CONECT      HN61   1 N6  
CONECT      HN62   1 N6  
END   
HET    CDY             30
HETNAM     CDY 2-CHLORODIDEOXYADENOSINE
FORMUL      CDY    C10 H12 Cl1 N5 O2

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science