Structure based on 2a46 | Ideal structure |
|
Name: [(4z)-2-[(1s)-1,5-diaminopentyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1h-imidazol-1-yl]acetic acid |
Formula: C17 H22 N4 O4 |
Weight: 346.381 |
SMILES: "NCCCC[CH](N)C1=NC(=Cc2ccc(O)cc2)C(=O)N1CC(O)=O" |
Spacial conformation based on PDB
2a46. Also present on 2a47, 2a48 |
RESIDUE CR7 47
CONECT N1 3 CA1 H H2
CONECT CA1 4 N1 CB1 C1 HA1
CONECT CB1 4 CA1 CG1 HB11 HB12
CONECT CG1 4 CB1 CD HG11 HG12
CONECT C1 3 CA1 N2 N3
CONECT N2 2 C1 CA2
CONECT N3 3 C1 C2 CA3
CONECT C2 3 N3 O2 CA2
CONECT O2 1 C2
CONECT CA2 3 N2 C2 CB2
CONECT CA3 4 N3 C3 HA31 HA32
CONECT C3 3 CA3 O3 OXT
CONECT O3 1 C3
CONECT CB2 3 CA2 CG2 HB2
CONECT CG2 3 CB2 CD1 CD2
CONECT CD1 3 CG2 CE1 HD1
CONECT CD2 3 CG2 CE2 HD2
CONECT CE1 3 CD1 CZ HE1
CONECT CE2 3 CD2 CZ HE2
CONECT CZ 3 CE1 CE2 OH
CONECT OH 2 CZ HOH
CONECT CD 4 CG1 CE HD1A HD2A
CONECT CE 4 CD NZ HE1A HE2A
CONECT NZ 3 CE HNZ1 HNZ2
CONECT OXT 2 C3 HXT
CONECT H 1 N1
CONECT H2 1 N1
CONECT HA1 1 CA1
CONECT HB11 1 CB1
CONECT HB12 1 CB1
CONECT HG11 1 CG1
CONECT HG12 1 CG1
CONECT HA31 1 CA3
CONECT HA32 1 CA3
CONECT HB2 1 CB2
CONECT HD1 1 CD1
CONECT HD2 1 CD2
CONECT HE1 1 CE1
CONECT HE2 1 CE2
CONECT HOH 1 OH
CONECT HD1A 1 CD
CONECT HD2A 1 CD
CONECT HE1A 1 CE
CONECT HE2A 1 CE
CONECT HNZ1 1 NZ
CONECT HNZ2 1 NZ
CONECT HXT 1 OXT
END
HET CR7 47
HETSYN CR7 CHROMOPHORE (LYS-TYR-GLY)
HETNAM CR7 [(4Z)-2-[(1S)-1,5-DIAMINOPENTYL]-4-(4-HYDROXYBENZYLIDEN
HETNAM 2 CR7 E)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID
FORMUL CR7 C17 H22 N4 O4