Structure based on 1vq2 | Ideal structure |
|
Name: 3,4-dihydro-2'-deoxyuridine-5'-monophosphate |
Formula: C9 H15 N2 O8 P |
Weight: 310.198 |
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)N2C=C[CH](O)NC2=O" |
Spacial conformation based on PDB
1vq2. Also present on 2hvw, 7uxd |
RESIDUE DDN 35
CONECT OP3 1 P
CONECT P 4 OP3 OP1 OP2 O5'
CONECT OP1 2 P H1P
CONECT OP2 2 P H2P
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5' H5''
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C3' 4 C4' O3' C2' H3'
CONECT O3' 2 C3' H1
CONECT C2' 4 C3' C1' H2' H2''
CONECT C1' 4 O4' C2' N1 H1'
CONECT N1 3 C1' C2 C6
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 3 C2 C4 HN3
CONECT C4 4 N3 O4 C5 H4
CONECT O4 2 C4 HO4
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT H1P 1 OP1
CONECT H2P 1 OP2
CONECT H5' 1 C5'
CONECT H5'' 1 C5'
CONECT H4' 1 C4'
CONECT H3' 1 C3'
CONECT H1 1 O3'
CONECT H2' 1 C2'
CONECT H2'' 1 C2'
CONECT H1' 1 C1'
CONECT HN3 1 N3
CONECT H4 1 C4
CONECT HO4 1 O4
CONECT H5 1 C5
CONECT H6 1 C6
END
HET DDN 35
HETSYN DDN ((2R,3S,5R)-3-HYDROXY-5-(4-HYDROXY-2-OXO-3,4-DIHYDROPYR
HETSYN 2 DDN IMIDIN-1(2H)-YL)-TETRAHYDROFURAN-2-YL)METHYL DIHYDROGEN
HETSYN 3 DDN PHOSPHATE
HETNAM DDN 3,4-DIHYDRO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
FORMUL DDN C9 H15 N2 O8 P1