Structure based on 2fzi

Ideal structure
Name: 2,4-diamino-5-[3',4'-dimethoxy-5'-(5-carboxyl-1-pentynyl)]benzyl pyrimidine
Formula: C19 H22 N4 O4
Weight: 370.402
SMILES: "COc1cc(Cc2cnc(N)nc2N)cc(C#CCCCC(O)=O)c1OC"
Spacial conformation based on PDB 2fzi.
Also present on 2fzj
RESIDUE   DH3     49
CONECT      N4     3 C4   HN41 HN42
CONECT      C4     3 N4   N3   C5  
CONECT      N3     2 C4   C2  
CONECT      C2     3 N3   N2   N1  
CONECT      N2     3 C2   HN21 HN22
CONECT      N1     2 C2   C6  
CONECT      C6     3 N1   C5   H6  
CONECT      C5     3 C4   C6   C51 
CONECT      C51    4 C5   C1'  H511 H512
CONECT      C1'    3 C51  C6'  C2' 
CONECT      C6'    3 C1'  C52  H6' 
CONECT      C52    3 C6'  C53  C4' 
CONECT      C53    2 C52  C54 
CONECT      C54    2 C53  C1  
CONECT      C1     4 C54  C3   H11  H12 
CONECT      C3     4 C1   C7   H31  H32 
CONECT      C7     4 C3   C8   H71  H72 
CONECT      C8     3 C7   O10  O9  
CONECT      O10    1 C8  
CONECT      O9     2 C8   HO9 
CONECT      C4'    3 C52  O5   C3' 
CONECT      O5     2 C4'  C5' 
CONECT      C5'    4 O5   H5'1 H5'2 H5'3
CONECT      C3'    3 C4'  O4   C2' 
CONECT      O4     2 C3'  C4B 
CONECT      C4B    4 O4   H4'1 H4'2 H4'3
CONECT      C2'    3 C1'  C3'  H2' 
CONECT      HN41   1 N4  
CONECT      HN42   1 N4  
CONECT      HN21   1 N2  
CONECT      HN22   1 N2  
CONECT      H6     1 C6  
CONECT      H511   1 C51 
CONECT      H512   1 C51 
CONECT      H6'    1 C6' 
CONECT      H11    1 C1  
CONECT      H12    1 C1  
CONECT      H31    1 C3  
CONECT      H32    1 C3  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      HO9    1 O9  
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H5'3   1 C5' 
CONECT      H4'1   1 C4B 
CONECT      H4'2   1 C4B 
CONECT      H4'3   1 C4B 
CONECT      H2'    1 C2' 
END   
HET    DH3             49
HETNAM     DH3 2,4-DIAMINO-5-[3',4'-DIMETHOXY-5'-(5-CARBOXYL-1-PENTYNY
HETNAM   2 DH3 L)]BENZYL PYRIMIDINE
FORMUL      DH3    C19 H22 N4 O4

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science