Structure based on 1n3i | Ideal structure |
|
Name: 3-hydroxy-4-hydroxymethyl-1-(4-oxo-4,4a,5,7a-tetrahydro-3h-pyrrolo[3,2-d]pyrimidin-7-ylmethyl)-pyrrolidinium |
Formula: C12 H19 N4 O3 |
Weight: 267.304 |
SMILES: "OC[CH]1C[NH+](C[CH]1O)CC2=CN[CH]3[CH]2N=CNC3=O" |
Spacial conformation based on PDB
1n3i. Also present in other
10 PDB entries. |
RESIDUE DIH 36
CONECT O5' 2 C5' H1
CONECT C5' 4 O5' C4' H2 H3
CONECT C4' 4 C5' C6' C3' H4
CONECT C6' 4 C4' N1' H5 H6
CONECT C3' 4 C4' O3' C2' H7
CONECT O3' 2 C3' H8
CONECT C2' 4 C3' N1' H9 H10
CONECT N1' 4 C6' C2' C10 H11
CONECT C10 4 N1' C9 H12 H13
CONECT C9 3 C10 C8 C4
CONECT C8 3 C9 N7 H14
CONECT N7 3 C8 C5 H15
CONECT C5 3 N7 C6 C4
CONECT C6 3 C5 O6 N1
CONECT O6 1 C6
CONECT N1 3 C6 C2 H16
CONECT C2 3 N1 N3 H17
CONECT N3 2 C2 C4
CONECT C4 3 C9 C5 N3
CONECT H1 1 O5'
CONECT H2 1 C5'
CONECT H3 1 C5'
CONECT H4 1 C4'
CONECT H5 1 C6'
CONECT H6 1 C6'
CONECT H7 1 C3'
CONECT H8 1 O3'
CONECT H9 1 C2'
CONECT H10 1 C2'
CONECT H11 1 N1'
CONECT H12 1 C10
CONECT H13 1 C10
CONECT H14 1 C8
CONECT H15 1 N7
CONECT H16 1 N1
CONECT H17 1 C2
END
HET DIH 36
HETNAM DIH 7-[[(3R,4R)-3-(hydroxymethyl)-4-oxidanyl-pyrrolidin-1-i
HETNAM 2 DIH um-1-yl]methyl]-3,5-dihydropyrrolo[3,2-d]pyrimidin-4-on
HETNAM 3 DIH e
FORMUL DIH C12 H17 N4 O3 1+