Structure based on 1ims

Ideal structure
Name: 4'-deoxy-4'-iododoxorubicin
Formula: C27 H29 I N O10
Weight: 654.424
SMILES: "COc1cccc2C(=O)c3c(O)c4C[C](O)(C[CH](O[CH]5C[CH]([NH3+])[CH](I)[CH](C)O5)c4c(O)c3C(=O)c12)C(=O)CO"
Spacial conformation based on PDB 1ims.
Also present on 1imr
RESIDUE   DM7     68
CONECT      C1     3 C2   C15  H1  
CONECT      C2     3 C1   C3   H2  
CONECT      C3     3 C2   C4   H3  
CONECT      C4     3 C3   C16  O4  
CONECT      C5     3 C16  C17  O5  
CONECT      C6     3 C17  C19  O6  
CONECT      C7     4 C8   C19  O7   H7  
CONECT      C8     4 C7   C9   H81  H82 
CONECT      C9     4 C8   C10  C13  O9  
CONECT      C10    4 C9   C20  H101 H102
CONECT      C11    3 C18  C20  O11 
CONECT      C12    3 C15  C18  O12 
CONECT      C13    3 C9   C14  O13 
CONECT      C14    4 C13  O14  H141 H142
CONECT      C15    3 C1   C12  C16 
CONECT      C16    3 C4   C5   C15 
CONECT      C17    3 C5   C6   C18 
CONECT      C18    3 C11  C12  C17 
CONECT      C19    3 C6   C7   C20 
CONECT      C20    3 C10  C11  C19 
CONECT      C21    4 O4   H211 H212 H213
CONECT      O4     2 C4   C21 
CONECT      O5     1 C5  
CONECT      O6     2 C6   HO6 
CONECT      O7     2 C7   C1' 
CONECT      O9     2 C9   HO9 
CONECT      O11    2 C11  HO11
CONECT      O12    1 C12 
CONECT      O13    1 C13 
CONECT      O14    2 C14  HO14
CONECT      C1'    4 O7   C2'  O5'  H1' 
CONECT      C2'    4 C1'  C3'  H2'1 H2'2
CONECT      C3'    4 C2'  C4'  N3'  H3' 
CONECT      C4'    4 C3'  C5'  I4'  H4' 
CONECT      C5'    4 C4'  C6'  O5'  H5' 
CONECT      C6'    4 C5'  H6'1 H6'2 H6'3
CONECT      O5'    2 C1'  C5' 
CONECT      N3'    4 C3'  HN'1 HN'2 HN'3
CONECT      I4'    1 C4' 
CONECT      H1     1 C1  
CONECT      H2     1 C2  
CONECT      H3     1 C3  
CONECT      H7     1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      H211   1 C21 
CONECT      H212   1 C21 
CONECT      H213   1 C21 
CONECT      HO6    1 O6  
CONECT      HO9    1 O9  
CONECT      HO11   1 O11 
CONECT      HO14   1 O14 
CONECT      H1'    1 C1' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H3'    1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H6'3   1 C6' 
CONECT      HN'1   1 N3' 
CONECT      HN'2   1 N3' 
CONECT      HN'3   1 N3' 
END   
HET    DM7             68
HETSYN     DM7 4'-DEOXY-4'-IODOADRIAMYCIN
HETNAM     DM7 4'-DEOXY-4'-IODODOXORUBICIN
FORMUL      DM7    C27 H29 I1 N1 O10 1+

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science