Structure based on ? | Ideal structure |
|
Name: 2-deoxyribofuranosyl-pyridine-2,6-dicarboxylic acid-5'-monophosphate |
Formula: C12 H14 N O10 P |
Weight: 363.214 |
SMILES: "O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)c2ccc(nc2C(O)=O)C(O)=O" |
Spacial conformation based on PDB
?. Also present on 1jes |
RESIDUE DPY 38
CONECT P 4 O1P O2P O5' O3P
CONECT O1P 1 P
CONECT O2P 2 P HOP2
CONECT O5' 2 P C5'
CONECT C1 3 C2 C6 C1'
CONECT C2 3 C1 C7 N3
CONECT C7 3 C2 O71 O72
CONECT O71 1 C7
CONECT O72 2 C7 H72
CONECT N3 2 C2 C4
CONECT C4 3 N3 C8 C5
CONECT C8 3 C4 O81 O82
CONECT O81 1 C8
CONECT O82 2 C8 H82
CONECT C5 3 C4 C6 H5
CONECT C6 3 C1 C5 H6
CONECT C2' 4 C1' C3' H2'1 H2'2
CONECT C5' 4 O5' C4' H5'1 H5'2
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C1' 4 C1 C2' O4' H1'
CONECT C3' 4 C2' C4' O3' H3'
CONECT O3' 2 C3' H3T
CONECT O3P 2 P HOP3
CONECT HOP2 1 O2P
CONECT H72 1 O72
CONECT H82 1 O82
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H2'1 1 C2'
CONECT H2'2 1 C2'
CONECT H5'1 1 C5'
CONECT H5'2 1 C5'
CONECT H4' 1 C4'
CONECT H1' 1 C1'
CONECT H3' 1 C3'
CONECT H3T 1 O3'
CONECT HOP3 1 O3P
END
HET DPY 38
HETNAM DPY 2-DEOXYRIBOFURANOSYL-PYRIDINE-2,6-DICARBOXYLIC ACID-5'-
HETNAM 2 DPY MONOPHOSPHATE
FORMUL DPY C12 H14 N1 O10 P1