PDB Short entry for 12AS HEADER LIGASE 02-DEC-97 12AS TITLE ASPARAGINE SYNTHETASE MUTANT C51A, C315A COMPLEXED WITH L-ASPARAGINE TITLE 2 AND AMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARAGINE SYNTHETASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: L-ASPARTATE\:AMMONIA LIGASE (AMP-FORMING); COMPND 5 EC: 6.3.1.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 GENE: ASNA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: JM109; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PUC18; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PUNAD37 CYS-FREE; SOURCE 11 EXPRESSION_SYSTEM_GENE: ASNA KEYWDS LIGASE, ASPARAGINE SYNTHETASE, NITROGEN FIXATION EXPDTA X-RAY DIFFRACTION AUTHOR T.NAKATSU,H.KATO,J.ODA REVDAT 5 02-AUG-23 12AS 1 REMARK REVDAT 4 03-NOV-21 12AS 1 REMARK SEQADV REVDAT 3 24-FEB-09 12AS 1 VERSN REVDAT 2 16-FEB-99 12AS 3 COMPND REMARK TITLE HETATM REVDAT 2 2 3 DBREF KEYWDS HEADER REVDAT 1 30-DEC-98 12AS 0 JRNL AUTH T.NAKATSU,H.KATO,J.ODA JRNL TITL CRYSTAL STRUCTURE OF ASPARAGINE SYNTHETASE REVEALS A CLOSE JRNL TITL 2 EVOLUTIONARY RELATIONSHIP TO CLASS II AMINOACYL-TRNA JRNL TITL 3 SYNTHETASE. JRNL REF NAT.STRUCT.BIOL. V. 5 15 1998 JRNL REFN ISSN 1072-8368 JRNL PMID 9437423 JRNL DOI 10.1038/NSB0198-15 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.NAKATSU,H.KATO,J.ODA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC STUDY OF REMARK 1 TITL 2 ASPARAGINE SYNTHETASE FROM ESCHERICHIA COLI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 52 604 1996 REMARK 1 REFN ISSN 0907-4449 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.SUGIYAMA,H.KATO,T.NISHIOKA,J.ODA REMARK 1 TITL OVEREXPRESSION AND PURIFICATION OF ASPARAGINE SYNTHETASE REMARK 1 TITL 2 FROM ESCHERICHIA COLI REMARK 1 REF BIOSCI.BIOTECHNOL.BIOCHEM. V. 56 376 1992 REMARK 1 REFN ISSN 0916-8451 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 71.1 REMARK 3 NUMBER OF REFLECTIONS : 24815 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2455 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.30 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 54.90 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2045 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE : 0.3450 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 250 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5118 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 203 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.250 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 27.40 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.700 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM19.SOL REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH19.SOL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 12AS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NOV-95 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MSC DOUBLE MIRROR REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROCESS REMARK 200 DATA SCALING SOFTWARE : PROCESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25168 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 72.1 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 53.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.23800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 11AS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN CRYSTALLIZED FROM 45% REMARK 280 SATURATED AMMONIUM SULFATE, 22 MM ASPARAGINE, 88 MM MGCL2, 10 % REMARK 280 (W/V) GLYCEROL 5 MM 2-MERCAPTOETHANOL, 50 MM HEPES, PH7.5 THEN REMARK 280 SOAKED BY 50MM AMP AND 50 MM ASPARAGINE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 63.06500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 THR A 3 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 THR B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 100 NE - CZ - NH1 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG A 176 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 255 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 78 NE - CZ - NH1 ANGL. DEV. = -3.0 DEGREES REMARK 500 LEU B 92 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 ARG B 187 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 210 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 255 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 48 -130.17 64.58 REMARK 500 SER A 72 164.07 176.61 REMARK 500 SER A 152 1.09 -67.13 REMARK 500 GLU A 153 -12.58 -140.75 REMARK 500 PHE A 160 -18.58 -148.40 REMARK 500 ALA A 195 100.77 -165.86 REMARK 500 ASP A 207 -134.36 -71.16 REMARK 500 SER A 222 -11.77 -142.69 REMARK 500 GLU A 244 46.88 39.05 REMARK 500 GLN A 306 53.31 73.01 REMARK 500 SER A 328 30.70 72.19 REMARK 500 LEU B 48 -121.84 63.24 REMARK 500 PRO B 108 7.96 -64.49 REMARK 500 GLU B 120 141.03 -171.93 REMARK 500 PHE B 160 -21.23 -147.82 REMARK 500 LEU B 205 -152.97 -102.23 REMARK 500 ASP B 207 -163.74 -59.78 REMARK 500 TYR B 218 -46.18 -143.08 REMARK 500 GLU B 226 -13.51 -49.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 10 0.14 SIDE CHAIN REMARK 500 ARG A 21 0.22 SIDE CHAIN REMARK 500 ARG A 26 0.10 SIDE CHAIN REMARK 500 ARG A 39 0.23 SIDE CHAIN REMARK 500 ARG A 78 0.25 SIDE CHAIN REMARK 500 ARG A 100 0.24 SIDE CHAIN REMARK 500 ARG A 105 0.17 SIDE CHAIN REMARK 500 ARG A 121 0.22 SIDE CHAIN REMARK 500 ARG A 128 0.22 SIDE CHAIN REMARK 500 ARG A 176 0.25 SIDE CHAIN REMARK 500 ARG A 185 0.11 SIDE CHAIN REMARK 500 ARG A 187 0.25 SIDE CHAIN REMARK 500 ARG A 210 0.20 SIDE CHAIN REMARK 500 ARG A 214 0.21 SIDE CHAIN REMARK 500 ARG A 255 0.18 SIDE CHAIN REMARK 500 ARG A 273 0.18 SIDE CHAIN REMARK 500 ARG A 284 0.14 SIDE CHAIN REMARK 500 ARG A 299 0.18 SIDE CHAIN REMARK 500 ARG A 323 0.15 SIDE CHAIN REMARK 500 ARG B 10 0.21 SIDE CHAIN REMARK 500 ARG B 21 0.24 SIDE CHAIN REMARK 500 ARG B 26 0.10 SIDE CHAIN REMARK 500 ARG B 39 0.22 SIDE CHAIN REMARK 500 ARG B 78 0.23 SIDE CHAIN REMARK 500 ARG B 100 0.22 SIDE CHAIN REMARK 500 ARG B 105 0.24 SIDE CHAIN REMARK 500 ARG B 121 0.23 SIDE CHAIN REMARK 500 ARG B 128 0.18 SIDE CHAIN REMARK 500 ARG B 176 0.20 SIDE CHAIN REMARK 500 ARG B 185 0.19 SIDE CHAIN REMARK 500 ARG B 187 0.23 SIDE CHAIN REMARK 500 ARG B 210 0.24 SIDE CHAIN REMARK 500 ARG B 214 0.13 SIDE CHAIN REMARK 500 ARG B 255 0.20 SIDE CHAIN REMARK 500 ARG B 273 0.22 SIDE CHAIN REMARK 500 ARG B 284 0.19 SIDE CHAIN REMARK 500 ARG B 299 0.17 SIDE CHAIN REMARK 500 ARG B 323 0.22 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: NU1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: AMP BINDING (CATALYTIC) SITE (CHAIN A). REMARK 800 REMARK 800 SITE_IDENTIFIER: NU2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: AMP BINDING (CATALYTIC) SITE (CHAIN B). REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASN A 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASN B 331 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP A 332 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AMP B 332 DBREF 12AS A 1 330 UNP P00963 ASNA_ECOLI 1 330 DBREF 12AS B 1 330 UNP P00963 ASNA_ECOLI 1 330 SEQADV 12AS ALA A 51 UNP P00963 CYS 51 ENGINEERED MUTATION SEQADV 12AS ALA A 315 UNP P00963 CYS 315 ENGINEERED MUTATION SEQADV 12AS ALA B 51 UNP P00963 CYS 51 ENGINEERED MUTATION SEQADV 12AS ALA B 315 UNP P00963 CYS 315 ENGINEERED MUTATION SEQRES 1 A 330 MET LYS THR ALA TYR ILE ALA LYS GLN ARG GLN ILE SER SEQRES 2 A 330 PHE VAL LYS SER HIS PHE SER ARG GLN LEU GLU GLU ARG SEQRES 3 A 330 LEU GLY LEU ILE GLU VAL GLN ALA PRO ILE LEU SER ARG SEQRES 4 A 330 VAL GLY ASP GLY THR GLN ASP ASN LEU SER GLY ALA GLU SEQRES 5 A 330 LYS ALA VAL GLN VAL LYS VAL LYS ALA LEU PRO ASP ALA SEQRES 6 A 330 GLN PHE GLU VAL VAL HIS SER LEU ALA LYS TRP LYS ARG SEQRES 7 A 330 GLN THR LEU GLY GLN HIS ASP PHE SER ALA GLY GLU GLY SEQRES 8 A 330 LEU TYR THR HIS MET LYS ALA LEU ARG PRO ASP GLU ASP SEQRES 9 A 330 ARG LEU SER PRO LEU HIS SER VAL TYR VAL ASP GLN TRP SEQRES 10 A 330 ASP TRP GLU ARG VAL MET GLY ASP GLY GLU ARG GLN PHE SEQRES 11 A 330 SER THR LEU LYS SER THR VAL GLU ALA ILE TRP ALA GLY SEQRES 12 A 330 ILE LYS ALA THR GLU ALA ALA VAL SER GLU GLU PHE GLY SEQRES 13 A 330 LEU ALA PRO PHE LEU PRO ASP GLN ILE HIS PHE VAL HIS SEQRES 14 A 330 SER GLN GLU LEU LEU SER ARG TYR PRO ASP LEU ASP ALA SEQRES 15 A 330 LYS GLY ARG GLU ARG ALA ILE ALA LYS ASP LEU GLY ALA SEQRES 16 A 330 VAL PHE LEU VAL GLY ILE GLY GLY LYS LEU SER ASP GLY SEQRES 17 A 330 HIS ARG HIS ASP VAL ARG ALA PRO ASP TYR ASP ASP TRP SEQRES 18 A 330 SER THR PRO SER GLU LEU GLY HIS ALA GLY LEU ASN GLY SEQRES 19 A 330 ASP ILE LEU VAL TRP ASN PRO VAL LEU GLU ASP ALA PHE SEQRES 20 A 330 GLU LEU SER SER MET GLY ILE ARG VAL ASP ALA ASP THR SEQRES 21 A 330 LEU LYS HIS GLN LEU ALA LEU THR GLY ASP GLU ASP ARG SEQRES 22 A 330 LEU GLU LEU GLU TRP HIS GLN ALA LEU LEU ARG GLY GLU SEQRES 23 A 330 MET PRO GLN THR ILE GLY GLY GLY ILE GLY GLN SER ARG SEQRES 24 A 330 LEU THR MET LEU LEU LEU GLN LEU PRO HIS ILE GLY GLN SEQRES 25 A 330 VAL GLN ALA GLY VAL TRP PRO ALA ALA VAL ARG GLU SER SEQRES 26 A 330 VAL PRO SER LEU LEU SEQRES 1 B 330 MET LYS THR ALA TYR ILE ALA LYS GLN ARG GLN ILE SER SEQRES 2 B 330 PHE VAL LYS SER HIS PHE SER ARG GLN LEU GLU GLU ARG SEQRES 3 B 330 LEU GLY LEU ILE GLU VAL GLN ALA PRO ILE LEU SER ARG SEQRES 4 B 330 VAL GLY ASP GLY THR GLN ASP ASN LEU SER GLY ALA GLU SEQRES 5 B 330 LYS ALA VAL GLN VAL LYS VAL LYS ALA LEU PRO ASP ALA SEQRES 6 B 330 GLN PHE GLU VAL VAL HIS SER LEU ALA LYS TRP LYS ARG SEQRES 7 B 330 GLN THR LEU GLY GLN HIS ASP PHE SER ALA GLY GLU GLY SEQRES 8 B 330 LEU TYR THR HIS MET LYS ALA LEU ARG PRO ASP GLU ASP SEQRES 9 B 330 ARG LEU SER PRO LEU HIS SER VAL TYR VAL ASP GLN TRP SEQRES 10 B 330 ASP TRP GLU ARG VAL MET GLY ASP GLY GLU ARG GLN PHE SEQRES 11 B 330 SER THR LEU LYS SER THR VAL GLU ALA ILE TRP ALA GLY SEQRES 12 B 330 ILE LYS ALA THR GLU ALA ALA VAL SER GLU GLU PHE GLY SEQRES 13 B 330 LEU ALA PRO PHE LEU PRO ASP GLN ILE HIS PHE VAL HIS SEQRES 14 B 330 SER GLN GLU LEU LEU SER ARG TYR PRO ASP LEU ASP ALA SEQRES 15 B 330 LYS GLY ARG GLU ARG ALA ILE ALA LYS ASP LEU GLY ALA SEQRES 16 B 330 VAL PHE LEU VAL GLY ILE GLY GLY LYS LEU SER ASP GLY SEQRES 17 B 330 HIS ARG HIS ASP VAL ARG ALA PRO ASP TYR ASP ASP TRP SEQRES 18 B 330 SER THR PRO SER GLU LEU GLY HIS ALA GLY LEU ASN GLY SEQRES 19 B 330 ASP ILE LEU VAL TRP ASN PRO VAL LEU GLU ASP ALA PHE SEQRES 20 B 330 GLU LEU SER SER MET GLY ILE ARG VAL ASP ALA ASP THR SEQRES 21 B 330 LEU LYS HIS GLN LEU ALA LEU THR GLY ASP GLU ASP ARG SEQRES 22 B 330 LEU GLU LEU GLU TRP HIS GLN ALA LEU LEU ARG GLY GLU SEQRES 23 B 330 MET PRO GLN THR ILE GLY GLY GLY ILE GLY GLN SER ARG SEQRES 24 B 330 LEU THR MET LEU LEU LEU GLN LEU PRO HIS ILE GLY GLN SEQRES 25 B 330 VAL GLN ALA GLY VAL TRP PRO ALA ALA VAL ARG GLU SER SEQRES 26 B 330 VAL PRO SER LEU LEU HET ASN A 331 9 HET AMP A 332 23 HET ASN B 331 9 HET AMP B 332 23 HETNAM ASN ASPARAGINE HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 3 ASN 2(C4 H8 N2 O3) FORMUL 4 AMP 2(C10 H14 N5 O7 P) FORMUL 7 HOH *203(H2 O) HELIX 1 1 TYR A 5 LEU A 27 1 23 HELIX 2 2 ALA A 74 GLN A 83 1 10 HELIX 3 3 PHE A 130 GLU A 154 1 25 HELIX 4 4 SER A 170 ARG A 176 1 7 HELIX 5 5 ALA A 182 LEU A 193 1 12 HELIX 6 6 ALA A 258 THR A 268 1 11 HELIX 7 7 GLU A 271 GLU A 275 5 5 HELIX 8 8 GLU A 277 LEU A 283 1 7 HELIX 9 9 GLN A 297 LEU A 305 1 9 HELIX 10 10 ILE A 310 GLN A 312 5 3 HELIX 11 11 ALA A 320 SER A 325 1 6 HELIX 12 12 TYR B 5 ARG B 26 1 22 HELIX 13 13 TRP B 76 GLN B 83 1 8 HELIX 14 14 PHE B 130 PHE B 155 1 26 HELIX 15 15 SER B 170 ARG B 176 1 7 HELIX 16 16 ALA B 182 LEU B 193 1 12 HELIX 17 17 ALA B 258 THR B 268 1 11 HELIX 18 18 GLU B 271 GLU B 275 5 5 HELIX 19 19 GLU B 277 LEU B 283 1 7 HELIX 20 20 GLN B 297 LEU B 304 1 8 HELIX 21 21 ILE B 310 GLN B 312 5 3 HELIX 22 22 ALA B 320 SER B 325 1 6 SHEET 1 A 8 LEU A 29 GLU A 31 0 SHEET 2 A 8 GLY A 91 LEU A 99 1 N GLY A 91 O ILE A 30 SHEET 3 A 8 TYR A 113 VAL A 122 -1 N GLU A 120 O LEU A 92 SHEET 4 A 8 THR A 290 GLY A 296 -1 N ILE A 295 O TRP A 117 SHEET 5 A 8 ASP A 245 ILE A 254 -1 N GLY A 253 O GLY A 292 SHEET 6 A 8 ASN A 233 ASN A 240 -1 N ASN A 240 O ASP A 245 SHEET 7 A 8 ALA A 195 VAL A 199 -1 N LEU A 198 O ASP A 235 SHEET 8 A 8 HIS A 166 HIS A 169 1 N HIS A 166 O PHE A 197 SHEET 1 B 2 LEU A 37 ARG A 39 0 SHEET 2 B 2 PHE A 67 VAL A 69 -1 N GLU A 68 O SER A 38 SHEET 1 C 8 LEU B 29 GLU B 31 0 SHEET 2 C 8 GLY B 91 LEU B 99 1 N GLY B 91 O ILE B 30 SHEET 3 C 8 TYR B 113 VAL B 122 -1 N GLU B 120 O LEU B 92 SHEET 4 C 8 THR B 290 GLY B 296 -1 N ILE B 295 O TRP B 117 SHEET 5 C 8 ASP B 245 ILE B 254 -1 N GLY B 253 O GLY B 292 SHEET 6 C 8 ASN B 233 ASN B 240 -1 N ASN B 240 O ASP B 245 SHEET 7 C 8 ALA B 195 VAL B 199 -1 N LEU B 198 O ASP B 235 SHEET 8 C 8 HIS B 166 HIS B 169 1 N HIS B 166 O PHE B 197 SHEET 1 D 2 LEU B 37 ARG B 39 0 SHEET 2 D 2 PHE B 67 VAL B 69 -1 N GLU B 68 O SER B 38 SITE 1 NU1 1 AMP A 332 SITE 1 NU2 1 AMP B 332 SITE 1 AC1 13 ASP A 46 SER A 72 ALA A 74 LYS A 77 SITE 2 AC1 13 GLN A 116 ASP A 118 TYR A 218 SER A 251 SITE 3 AC1 13 ARG A 255 GLY A 293 GLY A 294 AMP A 332 SITE 4 AC1 13 HOH A 371 SITE 1 AC2 13 ASP B 46 SER B 72 ALA B 74 LYS B 77 SITE 2 AC2 13 GLN B 116 ASP B 118 TYR B 218 ASP B 219 SITE 3 AC2 13 SER B 251 ARG B 255 GLY B 292 GLY B 293 SITE 4 AC2 13 AMP B 332 SITE 1 AC3 17 ARG A 100 GLU A 103 LEU A 109 HIS A 110 SITE 2 AC3 17 SER A 111 VAL A 114 GLN A 116 GLU A 248 SITE 3 AC3 17 LEU A 249 SER A 250 SER A 251 GLY A 294 SITE 4 AC3 17 GLY A 296 ARG A 299 ILE A 310 ASN A 331 SITE 5 AC3 17 HOH A 386 SITE 1 AC4 15 ARG B 100 GLU B 103 LEU B 109 HIS B 110 SITE 2 AC4 15 SER B 111 VAL B 114 GLN B 116 GLU B 248 SITE 3 AC4 15 LEU B 249 SER B 250 SER B 251 GLY B 296 SITE 4 AC4 15 ARG B 299 ASN B 331 HOH B 385 CRYST1 53.000 126.130 52.860 90.00 105.59 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018868 0.000000 0.005264 0.00000 SCALE2 0.000000 0.007928 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019640 0.00000 MTRIX1 1 -1.000000 -0.000220 0.000860 64.29259 1 MTRIX2 1 -0.000220 -0.875960 -0.482380 68.35215 1 MTRIX3 1 0.000860 -0.482380 0.875970 17.54653 1