PDB Short entry for 1A0Q HEADER CATALYTIC ANTIBODY 05-DEC-97 1A0Q TITLE 29G11 COMPLEXED WITH PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL] PHOSPHONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 29G11 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 FRAGMENT: FAB; COMPND 5 OTHER_DETAILS: PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL]PHOSPHONATE COMPND 6 HAPTEN; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 29G11 FAB (HEAVY CHAIN); COMPND 9 CHAIN: H; COMPND 10 FRAGMENT: FAB; COMPND 11 OTHER_DETAILS: PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL]PHOSPHONATE HAPTEN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 7 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 8 ORGANISM_TAXID: 10090 KEYWDS CATALYTIC ANTIBODY, ESTERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.L.BUCHBINDER,R.C.STEPHENSON,T.S.SCANLAN,R.J.FLETTERICK REVDAT 4 02-AUG-23 1A0Q 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1A0Q 1 VERSN REVDAT 2 04-MAY-99 1A0Q 3 HET COMPND REMARK HETATM REVDAT 2 2 3 DBREF ATOM JRNL CONECT REVDAT 1 02-MAR-99 1A0Q 0 JRNL AUTH J.L.BUCHBINDER,R.C.STEPHENSON,T.S.SCANLAN,R.J.FLETTERICK JRNL TITL A COMPARISON OF THE CRYSTALLOGRAPHIC STRUCTURES OF TWO JRNL TITL 2 CATALYTIC ANTIBODIES WITH ESTERASE ACTIVITY. JRNL REF J.MOL.BIOL. V. 282 1033 1998 JRNL REFN ISSN 0022-2836 JRNL PMID 9753552 JRNL DOI 10.1006/JMBI.1998.2025 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.W.ZHOU,J.GUO,W.HUANG,R.J.FLETTERICK,T.S.SCANLAN REMARK 1 TITL CRYSTAL STRUCTURE OF A CATALYTIC ANTIBODY WITH A SERINE REMARK 1 TITL 2 PROTEASE ACTIVE SITE REMARK 1 REF SCIENCE V. 265 1059 1994 REMARK 1 REFN ISSN 0036-8075 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.843 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 17083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1609 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.40 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 83.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1677 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 8.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 187 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.023 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3183 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 92 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.29 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.39 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 2.640 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 26.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.994 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1A0Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000170248. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : FEB-97 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : COLLIMATOR REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20072 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.40 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.28000 REMARK 200 R SYM FOR SHELL (I) : 0.30000 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.843 REMARK 200 STARTING MODEL: PDP ENTRY 1EAP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.48 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.39000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.17000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.30500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.17000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.39000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.30500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP L 1 REMARK 465 GLU H 1 REMARK 465 GLY H 98 REMARK 465 ARG H 99 REMARK 465 SER H 100 REMARK 465 ASN H 100A REMARK 465 GLY H 127 REMARK 465 SER H 128 REMARK 465 ALA H 129 REMARK 465 ALA H 130 REMARK 465 GLN H 131 REMARK 465 THR H 132 REMARK 465 ASN H 133 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG L 63 CG CD NE CZ NH1 NH2 REMARK 470 ASN L 212 CG OD1 ND2 REMARK 470 GLU L 213 CG CD OE1 OE2 REMARK 470 TYR H 96 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR H 97 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 VAL H 100B CG1 CG2 REMARK 470 GLU H 211 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS L 38 NE2 HIS L 38 CD2 -0.070 REMARK 500 HIS L 49 NE2 HIS L 49 CD2 -0.086 REMARK 500 HIS L 189 NE2 HIS L 189 CD2 -0.077 REMARK 500 HIS L 198 NE2 HIS L 198 CD2 -0.074 REMARK 500 HIS H 32 NE2 HIS H 32 CD2 -0.079 REMARK 500 HIS H 35 NE2 HIS H 35 CD2 -0.073 REMARK 500 HIS H 164 NE2 HIS H 164 CD2 -0.067 REMARK 500 HIS H 199 NE2 HIS H 199 CD2 -0.067 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TRP L 35 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP L 35 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG L 108 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG L 108 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 TYR L 140 CA - C - N ANGL. DEV. = -17.8 DEGREES REMARK 500 TYR L 140 O - C - N ANGL. DEV. = 10.2 DEGREES REMARK 500 SER L 141 N - CA - C ANGL. DEV. = -18.8 DEGREES REMARK 500 TRP L 148 CD1 - CG - CD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 TRP L 148 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP L 163 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP L 163 CE2 - CD2 - CG ANGL. DEV. = -6.2 DEGREES REMARK 500 TRP H 36 CD1 - CG - CD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 TRP H 36 CE2 - CD2 - CG ANGL. DEV. = -5.7 DEGREES REMARK 500 TRP H 47 CD1 - CG - CD2 ANGL. DEV. = 6.5 DEGREES REMARK 500 TRP H 47 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 TRP H 103 CD1 - CG - CD2 ANGL. DEV. = 6.3 DEGREES REMARK 500 TRP H 103 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP H 154 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP H 154 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 TRP H 188 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP H 188 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR L 51 -58.85 65.24 REMARK 500 LEU L 94 -148.66 59.34 REMARK 500 ASN L 138 74.84 43.21 REMARK 500 SER L 141 108.67 114.85 REMARK 500 SER L 171 11.02 55.12 REMARK 500 LYS H 40 -133.68 39.06 REMARK 500 GLU H 42 -69.00 76.93 REMARK 500 SER H 82B 63.50 39.09 REMARK 500 SER H 160 -52.89 -155.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN L 43 PRO L 44 142.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN L 214 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 212 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN H 213 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEP H 214 DBREF 1A0Q L 3 213 GB 12002896 AAG43420 3 212 DBREF 1A0Q H 6 210 GB 3399661 AAC28908 2 213 SEQADV 1A0Q LEU L 4 GB 12002896 MET 4 CONFLICT SEQADV 1A0Q THR L 22 GB 12002896 ALA 22 CONFLICT SEQADV 1A0Q SER L 26 GB 12002896 ASN 26 CONFLICT SEQADV 1A0Q LYS L 30 GB 12002896 ASN 30 CONFLICT SEQADV 1A0Q GLY L 34 GB 12002896 ALA 34 CONFLICT SEQADV 1A0Q GLN L 43 GB 12002896 GLY 43 CONFLICT SEQADV 1A0Q LEU L 55 GB 12002896 GLN 55 CONFLICT SEQADV 1A0Q ARG L 63 GB 12002896 SER 63 CONFLICT SEQADV 1A0Q TYR L 92 GB 12002896 ASP 92 CONFLICT SEQADV 1A0Q SER L 141 GB 12002896 PRO 140 CONFLICT SEQADV 1A0Q GLU L 187 GB 12002896 GLY 186 CONFLICT SEQADV 1A0Q ASP H 8 GB 3399661 GLY 4 CONFLICT SEQADV 1A0Q ALA H 9 GB 3399661 PRO 5 CONFLICT SEQADV 1A0Q ILE H 20 GB 3399661 MET 16 CONFLICT SEQADV 1A0Q ASP H 31 GB 3399661 SER 27 CONFLICT SEQADV 1A0Q HIS H 32 GB 3399661 TYR 28 CONFLICT SEQADV 1A0Q ILE H 34 GB 3399661 MET 30 CONFLICT SEQADV 1A0Q GLU H 42 GB 3399661 GLY 38 CONFLICT SEQADV 1A0Q SER H 52 GB 3399661 ASN 48 CONFLICT SEQADV 1A0Q GLY H 53 GB 3399661 TYR 50 CONFLICT SEQADV 1A0Q GLY H 55 GB 3399661 ASP 52 CONFLICT SEQADV 1A0Q ASP H 56 GB 3399661 GLY 53 CONFLICT SEQADV 1A0Q ILE H 57 GB 3399661 THR 54 CONFLICT SEQADV 1A0Q ALA H 71 GB 3399661 SER 68 CONFLICT SEQADV 1A0Q GLN H 81 GB 3399661 GLU 78 CONFLICT SEQADV 1A0Q ASN H 82A GB 3399661 SER 80 CONFLICT SEQADV 1A0Q LEU H 91 GB 3399661 TYR 91 CONFLICT SEQADV 1A0Q LYS H 93 GB 3399661 VAL 93 CONFLICT SEQADV 1A0Q H GB 3399661 GLY 95 DELETION SEQADV 1A0Q TYR H 97 GB 3399661 ARG 98 CONFLICT SEQADV 1A0Q GLY H 98 GB 3399661 PRO 99 CONFLICT SEQADV 1A0Q ARG H 99 GB 3399661 TYR 100 CONFLICT SEQADV 1A0Q SER H 100 GB 3399661 TYR 101 CONFLICT SEQADV 1A0Q ASN H 100A GB 3399661 ALA 102 CONFLICT SEQADV 1A0Q VAL H 100B GB 3399661 MET 103 CONFLICT SEQADV 1A0Q THR H 108 GB 3399661 SER 111 CONFLICT SEQADV 1A0Q LEU H 109 GB 3399661 VAL 112 CONFLICT SEQRES 1 L 212 ASP ILE GLU LEU THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 212 SER LEU GLY GLY LYS VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 212 GLN ASP ILE LYS LYS TYR ILE GLY TRP TYR GLN HIS LYS SEQRES 4 L 212 PRO GLY LYS GLN PRO ARG LEU LEU ILE HIS TYR THR SER SEQRES 5 L 212 THR LEU LEU PRO GLY ILE PRO SER ARG PHE ARG GLY SER SEQRES 6 L 212 GLY SER GLY ARG ASP TYR SER PHE SER ILE SER ASN LEU SEQRES 7 L 212 GLU PRO GLU ASP ILE ALA THR TYR TYR CYS LEU GLN TYR SEQRES 8 L 212 TYR ASN LEU ARG THR PHE GLY GLY GLY THR LYS LEU GLU SEQRES 9 L 212 ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE SEQRES 10 L 212 PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SER SEQRES 11 L 212 VAL VAL CYS PHE LEU ASN ASN PHE TYR SER LYS ASP ILE SEQRES 12 L 212 ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN ASN SEQRES 13 L 212 GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS ASP SEQRES 14 L 212 SER THR TYR SER MET SER SER THR LEU THR LEU THR LYS SEQRES 15 L 212 ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU ALA SEQRES 16 L 212 THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER PHE SEQRES 17 L 212 ASN ARG ASN GLU SEQRES 1 H 217 GLU VAL GLN LEU GLN GLU SER ASP ALA GLU LEU VAL LYS SEQRES 2 H 217 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 217 TYR THR PHE THR ASP HIS VAL ILE HIS TRP VAL LYS GLN SEQRES 4 H 217 LYS PRO GLU GLN GLY LEU GLU TRP ILE GLY TYR ILE SER SEQRES 5 H 217 PRO GLY ASN GLY ASP ILE LYS TYR ASN GLU LYS PHE LYS SEQRES 6 H 217 GLY LYS ALA THR LEU THR ALA ASP LYS SER SER SER THR SEQRES 7 H 217 ALA TYR MET GLN LEU ASN SER LEU THR SER GLU ASP SER SEQRES 8 H 217 ALA VAL TYR LEU CYS LYS ARG GLY TYR TYR GLY ARG SER SEQRES 9 H 217 ASN VAL ASP TYR TRP GLY GLN GLY THR THR LEU THR VAL SEQRES 10 H 217 SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO LEU SEQRES 11 H 217 ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL THR SEQRES 12 H 217 LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL SEQRES 13 H 217 THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY VAL SEQRES 14 H 217 HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR THR SEQRES 15 H 217 LEU SER SER SER VAL THR VAL PRO SER SER THR TRP PRO SEQRES 16 H 217 SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SER SEQRES 17 H 217 SER THR LYS VAL ASP LYS LYS ILE GLU HET ZN L 214 1 HET ZN H 212 1 HET ZN H 213 1 HET HEP H 214 23 HETNAM ZN ZINC ION HETNAM HEP PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE FORMUL 3 ZN 3(ZN 2+) FORMUL 6 HEP C15 H22 N O6 P FORMUL 7 HOH *92(H2 O) HELIX 1 1 PRO L 80 ASP L 82 5 3 HELIX 2 2 GLN L 124 THR L 126 5 3 HELIX 3 3 LYS L 183 GLU L 187 1 5 HELIX 4 4 PHE H 29 ASP H 31 5 3 HELIX 5 5 GLU H 61 PHE H 63 5 3 HELIX 6 6 LYS H 73 SER H 75 5 3 HELIX 7 7 SER H 84 ASP H 86 5 3 HELIX 8 8 ASN H 155 GLY H 157 5 3 HELIX 9 9 PRO H 200 SER H 202 5 3 SHEET 1 A 4 LEU L 4 SER L 7 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 N LYS L 24 O THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 N ILE L 75 O VAL L 19 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 67 O ASP L 70 SHEET 1 B 5 SER L 10 ALA L 13 0 SHEET 2 B 5 THR L 102 ILE L 106 1 N LYS L 103 O LEU L 11 SHEET 3 B 5 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 B 5 ILE L 33 HIS L 38 -1 N HIS L 38 O THR L 85 SHEET 5 B 5 PRO L 44 ILE L 48 -1 N ILE L 48 O TRP L 35 SHEET 1 C 4 THR L 114 PHE L 118 0 SHEET 2 C 4 GLY L 129 ASN L 137 -1 N ASN L 137 O THR L 114 SHEET 3 C 4 MET L 175 THR L 182 -1 N LEU L 181 O ALA L 130 SHEET 4 C 4 VAL L 159 TRP L 163 -1 N SER L 162 O SER L 176 SHEET 1 D 4 SER L 153 ARG L 155 0 SHEET 2 D 4 ASN L 145 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 D 4 SER L 191 THR L 197 -1 N THR L 197 O ASN L 145 SHEET 4 D 4 ILE L 205 ASN L 210 -1 N PHE L 209 O TYR L 192 SHEET 1 E 4 GLN H 3 GLU H 6 0 SHEET 2 E 4 VAL H 18 SER H 25 -1 N SER H 25 O GLN H 3 SHEET 3 E 4 THR H 77 LEU H 82 -1 N LEU H 82 O VAL H 18 SHEET 4 E 4 ALA H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 F 6 GLU H 10 VAL H 12 0 SHEET 2 F 6 THR H 107 VAL H 111 1 N THR H 110 O GLU H 10 SHEET 3 F 6 ALA H 88 ARG H 94 -1 N TYR H 90 O THR H 107 SHEET 4 F 6 VAL H 33 GLN H 39 -1 N GLN H 39 O VAL H 89 SHEET 5 F 6 LEU H 45 SER H 52 -1 N ILE H 51 O ILE H 34 SHEET 6 F 6 ILE H 57 TYR H 59 -1 N LYS H 58 O TYR H 50 SHEET 1 G 4 SER H 120 LEU H 124 0 SHEET 2 G 4 MET H 135 LYS H 143 -1 N LYS H 143 O SER H 120 SHEET 3 G 4 LEU H 177 PRO H 184 -1 N VAL H 183 O VAL H 136 SHEET 4 G 4 VAL H 163 THR H 165 -1 N HIS H 164 O SER H 180 SHEET 1 H 3 THR H 151 TRP H 154 0 SHEET 2 H 3 VAL H 193 HIS H 199 -1 N ALA H 198 O THR H 151 SHEET 3 H 3 THR H 204 ILE H 210 -1 N ILE H 210 O VAL H 193 SHEET 1 I 2 VAL H 169 GLN H 171 0 SHEET 2 I 2 LEU H 174 THR H 176 -1 N THR H 176 O VAL H 169 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.02 SSBOND 2 CYS L 134 CYS L 194 1555 1555 2.02 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.02 SSBOND 4 CYS H 140 CYS H 195 1555 1555 2.02 LINK OE1 GLU L 185 ZN ZN L 214 1555 1555 2.73 LINK NE2 HIS H 32 ZN ZN H 212 1555 1555 2.75 CISPEP 1 SER L 7 PRO L 8 0 -10.56 CISPEP 2 LYS H 40 PRO H 41 0 -11.90 CISPEP 3 PHE H 146 PRO H 147 0 -3.97 CISPEP 4 GLU H 148 PRO H 149 0 -3.25 CISPEP 5 TRP H 188 PRO H 189 0 3.86 SITE 1 AC1 4 ARG L 155 GLU L 185 HIS L 189 ASN L 210 SITE 1 AC2 1 HIS H 32 SITE 1 AC3 3 ASP H 56 LYS H 58 HIS L 49 SITE 1 AC4 9 HIS H 35 LYS H 93 TYR H 96 TYR H 97 SITE 2 AC4 9 TYR L 36 LEU L 89 TYR L 91 ARG L 96 SITE 3 AC4 9 PHE L 98 CRYST1 36.780 82.610 132.340 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027189 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012105 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007556 0.00000