PDB Short entry for 1AV6
HEADER    TRANSFERASE/RNA                         26-SEP-97   1AV6              
TITLE     VACCINIA METHYLTRANSFERASE VP39 COMPLEXED WITH M7G CAPPED RNA HEXAMER 
TITLE    2 AND S-ADENOSYLHOMOCYSTEINE                                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: RNA (5'-R(*GP*AP*AP*AP*AP*A)-3');                          
COMPND   3 CHAIN: B;                                                            
COMPND   4 SYNONYM: 5' CAPPED RNA HEXAMER;                                      
COMPND   5 ENGINEERED: YES;                                                     
COMPND   6 MOL_ID: 2;                                                           
COMPND   7 MOLECULE: CAP-SPECIFIC MRNA (NUCLEOSIDE-2'-O-)-METHYLTRANSFERASE;    
COMPND   8 CHAIN: A;                                                            
COMPND   9 SYNONYM: POLY(A) POLYMERASE REGULATORY SUBUNIT, POLY(A) POLYMERASE   
COMPND  10 SMALL SUBUNIT, PAP-S, VP39;                                          
COMPND  11 EC: 2.1.1.57;                                                        
COMPND  12 ENGINEERED: YES;                                                     
COMPND  13 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 MOL_ID: 2;                                                           
SOURCE   3 ORGANISM_SCIENTIFIC: VACCINIA VIRUS WR;                              
SOURCE   4 ORGANISM_COMMON: VACV;                                               
SOURCE   5 ORGANISM_TAXID: 10254;                                               
SOURCE   6 STRAIN: WESTERN RESERVE;                                             
SOURCE   7 GENE: PAPS, VACWR095, F9;                                            
SOURCE   8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   9 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE  10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)                                 
KEYWDS    SINGLE-STRANDED RNA, METHYLTRANSFERASE, RNA CAP, POLY(A) POLYMERASE,  
KEYWDS   2 VACCINIA, MRNA PROCESSING, TRANSCRIPTION, COMPLEX (TRANSFERASE-RNA), 
KEYWDS   3 TRANSFERASE-RNA COMPLEX                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    A.E.HODEL,P.D.GERSHON,F.A.QUIOCHO                                     
REVDAT   6   02-AUG-23 1AV6    1       REMARK LINK                              
REVDAT   5   26-FEB-20 1AV6    1       REMARK LINK                              
REVDAT   4   12-JAN-11 1AV6    1       COMPND DBREF  SOURCE                     
REVDAT   3   24-FEB-09 1AV6    1       VERSN                                    
REVDAT   2   01-APR-03 1AV6    1       JRNL                                     
REVDAT   1   25-FEB-98 1AV6    0                                                
JRNL        AUTH   A.E.HODEL,P.D.GERSHON,F.A.QUIOCHO                            
JRNL        TITL   STRUCTURAL BASIS FOR SEQUENCE-NONSPECIFIC RECOGNITION OF     
JRNL        TITL 2 5'-CAPPED MRNA BY A CAP-MODIFYING ENZYME.                    
JRNL        REF    MOL.CELL                      V.   1   443 1998              
JRNL        REFN                   ISSN 1097-2765                               
JRNL        PMID   9660928                                                      
JRNL        DOI    10.1016/S1097-2765(00)80044-1                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR 3.851                                         
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 8.00                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : 100000.000                     
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : 0.0001                         
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 92.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 9284                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : FREE-R                          
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.215                           
REMARK   3   FREE R VALUE                     : 0.285                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.000                           
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : NULL                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : NULL                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : NULL                         
REMARK   3   BIN R VALUE           (WORKING SET) : NULL                         
REMARK   3   BIN FREE R VALUE                    : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : NULL                         
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2387                                    
REMARK   3   NUCLEIC ACID ATOMS       : 130                                     
REMARK   3   HETEROGEN ATOMS          : 58                                      
REMARK   3   SOLVENT ATOMS            : 0                                       
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 27.00                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 13.00                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.010                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.700                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : GROUP                                     
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.500 ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 2.000 ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.000 ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 2.000 ; NULL                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS:                                           
REMARK   3  SINGLE PHOSPHATE LINKS BETWEEN RESIDUES ARE                         
REMARK   3  PHOSPHOROTHIOATE, I.E., M7GPPPG-PS-A-PS-A-PS-A-PS-A-PS-A.           
REMARK   3  PHOSPHOROTHIOLATES ARE LEFT AS PHOSPHATE IN THIS INITIAL            
REMARK   3  DEPOSITION.                                                         
REMARK   4                                                                      
REMARK   4 1AV6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB.                                
REMARK 100 THE DEPOSITION ID IS D_1000171297.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 15-AUG-97                          
REMARK 200  TEMPERATURE           (KELVIN) : 103.00                             
REMARK 200  PH                             : 8.50                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RU200                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : NULL                               
REMARK 200  MONOCHROMATOR                  : NI FILTER                          
REMARK 200  OPTICS                         : GOBEL MIRROR                       
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : AREA DETECTOR                      
REMARK 200  DETECTOR MANUFACTURER          : SIEMENS                            
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : SMART                              
REMARK 200  DATA SCALING SOFTWARE          : SAINT                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 9755                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.700                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 20.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 2.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 92.0                               
REMARK 200  DATA REDUNDANCY                : 3.000                              
REMARK 200  R MERGE                    (I) : 0.09500                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 20.0000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.80                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.00                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.21000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 6.000                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR                    
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 1VPT                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 56.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.50                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       30.90000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       49.75000            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       32.30000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       49.75000            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       30.90000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       32.30000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     LYS A   142                                                      
REMARK 465     ARG A   143                                                      
REMARK 465     GLY A   144                                                      
REMARK 465     GLY A   145                                                      
REMARK 465     ASN A   146                                                      
REMARK 465     GLU A   147                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     ARG A  97    CG   CD   NE   CZ   NH1  NH2                        
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500      A B 407   P       A B 407   O5'     0.074                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500      G B 402   C5' -  C4' -  C3' ANGL. DEV. = -14.4 DEGREES          
REMARK 500      G B 402   C5' -  C4' -  O4' ANGL. DEV. =   7.7 DEGREES          
REMARK 500      G B 402   O4' -  C1' -  N9  ANGL. DEV. =   4.2 DEGREES          
REMARK 500      G B 402   N7  -  C8  -  N9  ANGL. DEV. =   4.4 DEGREES          
REMARK 500      G B 402   C8  -  N9  -  C4  ANGL. DEV. =  -4.5 DEGREES          
REMARK 500      A B 403   C5  -  C6  -  N6  ANGL. DEV. =  -5.2 DEGREES          
REMARK 500      A B 405   C3' -  C2' -  C1' ANGL. DEV. =  -5.5 DEGREES          
REMARK 500      A B 405   N1  -  C2  -  N3  ANGL. DEV. =  -3.1 DEGREES          
REMARK 500      A B 406   O4' -  C1' -  N9  ANGL. DEV. =   4.6 DEGREES          
REMARK 500      A B 406   C8  -  N9  -  C4  ANGL. DEV. =  -3.3 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A  95      148.18   -173.10                                   
REMARK 500    ILE A 102        1.14    -68.39                                   
REMARK 500    ARG A 114      143.87    176.75                                   
REMARK 500    ASP A 138       25.09   -167.11                                   
REMARK 500    SER A 203      -37.58    -33.00                                   
REMARK 500    MET A 219     -156.90    171.32                                   
REMARK 500    ARG A 220      131.56    167.38                                   
REMARK 500    ILE A 242      -84.60    -93.85                                   
REMARK 500    TYR A 253      145.87   -173.37                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500      A B 405         0.05    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MGT B 408                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAH A 400                 
DBREF  1AV6 A    3   297  UNP    P07617   PAP2_VACCW       3    297             
DBREF  1AV6 B  402   407  PDB    1AV6     1AV6           402    407             
SEQRES   1 B    6    G   A   A   A   A   A                                      
SEQRES   1 A  295  VAL VAL SER LEU ASP LYS PRO PHE MET TYR PHE GLU GLU          
SEQRES   2 A  295  ILE ASP ASN GLU LEU ASP TYR GLU PRO GLU SER ALA ASN          
SEQRES   3 A  295  GLU VAL ALA LYS LYS LEU PRO TYR GLN GLY GLN LEU LYS          
SEQRES   4 A  295  LEU LEU LEU GLY GLU LEU PHE PHE LEU SER LYS LEU GLN          
SEQRES   5 A  295  ARG HIS GLY ILE LEU ASP GLY ALA THR VAL VAL TYR ILE          
SEQRES   6 A  295  GLY SER ALA PRO GLY THR HIS ILE ARG TYR LEU ARG ASP          
SEQRES   7 A  295  HIS PHE TYR ASN LEU GLY VAL ILE ILE LYS TRP MET LEU          
SEQRES   8 A  295  ILE ASP GLY ARG HIS HIS ASP PRO ILE LEU ASN GLY LEU          
SEQRES   9 A  295  ARG ASP VAL THR LEU VAL THR ARG PHE VAL ASP GLU GLU          
SEQRES  10 A  295  TYR LEU ARG SER ILE LYS LYS GLN LEU HIS PRO SER LYS          
SEQRES  11 A  295  ILE ILE LEU ILE SER ASP VAL ARG SER LYS ARG GLY GLY          
SEQRES  12 A  295  ASN GLU PRO SER THR ALA ASP LEU LEU SER ASN TYR ALA          
SEQRES  13 A  295  LEU GLN ASN VAL MET ILE SER ILE LEU ASN PRO VAL ALA          
SEQRES  14 A  295  SER SER LEU LYS TRP ARG CYS PRO PHE PRO ASP GLN TRP          
SEQRES  15 A  295  ILE LYS ASP PHE TYR ILE PRO HIS GLY ASN LYS MET LEU          
SEQRES  16 A  295  GLN PRO PHE ALA PRO SER TYR SER ALA GLU MET ARG LEU          
SEQRES  17 A  295  LEU SER ILE TYR THR GLY GLU ASN MET ARG LEU THR ARG          
SEQRES  18 A  295  VAL THR LYS SER ASP ALA VAL ASN TYR GLU LYS LYS MET          
SEQRES  19 A  295  TYR TYR LEU ASN LYS ILE VAL ARG ASN LYS VAL VAL VAL          
SEQRES  20 A  295  ASN PHE ASP TYR PRO ASN GLN GLU TYR ASP TYR PHE HIS          
SEQRES  21 A  295  MET TYR PHE MET LEU ARG THR VAL TYR CYS ASN LYS THR          
SEQRES  22 A  295  PHE PRO THR THR LYS ALA LYS VAL LEU PHE LEU GLN GLN          
SEQRES  23 A  295  SER ILE PHE ARG PHE LEU ASN ILE PRO                          
HET    MGT  B 408      36                                                       
HET    SAH  A 400      29                                                       
HETNAM     MGT 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE                       
HETNAM     SAH S-ADENOSYL-L-HOMOCYSTEINE                                        
FORMUL   3  MGT    C11 H20 N5 O14 P3                                            
FORMUL   4  SAH    C14 H20 N6 O5 S                                              
HELIX    1   1 PHE A   13  GLU A   15  5                                   3    
HELIX    2   2 PRO A   24  ASN A   28  5                                   5    
HELIX    3   3 GLN A   37  HIS A   56  1                                  20    
HELIX    4   4 THR A   73  LEU A   85  1                                  13    
HELIX    5   5 PRO A  101  LEU A  103  5                                   3    
HELIX    6   6 GLU A  118  LEU A  128  1                                  11    
HELIX    7   7 THR A  150  LEU A  167  1                                  18    
HELIX    8   8 LYS A  226  LYS A  241  1                                  16    
HELIX    9   9 VAL A  243  ASN A  245  5                                   3    
HELIX   10  10 TYR A  258  THR A  269  1                                  12    
HELIX   11  11 THR A  279  PHE A  293  1                                  15    
SHEET    1   A 7 ASN A 194  MET A 196  0                                        
SHEET    2   A 7 MET A 208  ILE A 213 -1  N  LEU A 211   O  ASN A 194           
SHEET    3   A 7 ALA A 171  TRP A 176 -1  N  TRP A 176   O  MET A 208           
SHEET    4   A 7 ILE A 133  SER A 137  1  N  LEU A 135   O  ALA A 171           
SHEET    5   A 7 ALA A  62  ILE A  67  1  N  THR A  63   O  ILE A 134           
SHEET    6   A 7 ILE A  89  ASP A  95  1  N  LYS A  90   O  ALA A  62           
SHEET    7   A 7 VAL A 109  THR A 113  1  N  THR A 110   O  TRP A  91           
SHEET    1   B 2 PHE A 188  PRO A 191  0                                        
SHEET    2   B 2 LEU A 221  VAL A 224 -1  N  VAL A 224   O  PHE A 188           
LINK         O5'   G B 402                 PG  MGT B 408     1555   1555  1.62  
CISPEP   1 ALA A   70    PRO A   71          0         0.52                     
CISPEP   2 HIS A  129    PRO A  130          0        -0.89                     
SITE     1 AC1 11 TYR A  22  ALA A  27  PRO A 148  ARG A 177                    
SITE     2 AC1 11 PHE A 180  ASP A 182  TYR A 204  SER A 205                    
SITE     3 AC1 11 GLU A 207  GLU A 233    G B 402                               
SITE     1 AC2 16 GLN A  39  LEU A  42  TYR A  66  ILE A  67                    
SITE     2 AC2 16 GLY A  68  ALA A  70  PRO A  71  GLY A  72                    
SITE     3 AC2 16 HIS A  74  ASP A  95  PHE A 115  VAL A 116                    
SITE     4 AC2 16 ASP A 138  VAL A 139  LEU A 159    G B 402                    
CRYST1   61.800   64.600   99.500  90.00  90.00  90.00 P 21 21 21    4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.016181  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.015480  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.010050        0.00000