PDB Short entry for 1AWH HEADER COMPLEX (PROTEASE/INHIBITOR) 02-OCT-97 1AWH TITLE NOVEL COVALENT THROMBIN INHIBITOR FROM PLANT EXTRACT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA THROMBIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 OTHER_DETAILS: ACTIVE SITE INHIBITOR OF THROMBIN; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ALPHA THROMBIN; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: FACTOR II; COMPND 11 EC: 3.4.21.5; COMPND 12 OTHER_DETAILS: ACTIVE SITE INHIBITOR OF THROMBIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 ORGAN: BLOOD; SOURCE 6 TISSUE: BLOOD PLASMA; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 ORGAN: BLOOD; SOURCE 12 TISSUE: BLOOD PLASMA KEYWDS PROTEINASE, BLOOD COAGULATION, TRYPSIN LIKE PROTEINASE, COMPLEX KEYWDS 2 (PROTEASE-INHIBITOR), COMPLEX (PROTEASE-INHIBITOR) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.JHOTI,A.CLEASBY,A.WONACOTT REVDAT 5 18-APR-18 1AWH 1 REMARK REVDAT 4 04-APR-18 1AWH 1 REMARK REVDAT 3 24-FEB-09 1AWH 1 VERSN REVDAT 2 18-NOV-98 1AWH 2 SOURCE COMPND REMARK DBREF REVDAT 2 2 2 KEYWDS HEADER CONECT LINK REVDAT 1 28-OCT-98 1AWH 0 JRNL AUTH M.P.WEIR,S.S.BETHELL,A.CLEASBY,C.J.CAMPBELL,R.J.DENNIS, JRNL AUTH 2 C.J.DIX,H.FINCH,H.JHOTI,C.J.MOONEY,S.PATEL,C.M.TANG,M.WARD, JRNL AUTH 3 A.J.WONACOTT,C.W.WHARTON JRNL TITL NOVEL NATURAL PRODUCT 5,5-TRANS-LACTONE INHIBITORS OF HUMAN JRNL TITL 2 ALPHA-THROMBIN: MECHANISM OF ACTION AND STRUCTURAL STUDIES. JRNL REF BIOCHEMISTRY V. 37 6645 1998 JRNL REFN ISSN 0006-2960 JRNL PMID 9578548 JRNL DOI 10.1021/BI972499O REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 10000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4760 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 2 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.018 REMARK 3 BOND ANGLES (DEGREES) : 3.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 30.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 2.100 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1AWH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171340. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : DEC-91 REMARK 200 TEMPERATURE (KELVIN) : 290 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : ENRAF-NONIUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : GRAPHITE(002) REMARK 200 OPTICS : MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : DIFFRACTOMETER REMARK 200 DETECTOR MANUFACTURER : ENRAF-NONIUS FAST REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CCP4, MADNES REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: X-PLOR 3.1 REMARK 200 STARTING MODEL: PPACK-THROMBIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14% PEG4K, 100MM NA ACETATE, PH 4.0. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.80000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.85000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.40000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.85000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.80000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.40000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE DEPOSITED STRUCTURE IS THE DIMER FOUND IN THE REMARK 300 ASYMMETRIC UNIT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3530 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER D 195 O33 GR3 D 1 2.08 REMARK 500 OG SER B 195 O33 GR3 B 1 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP B 148 CE2 TRP B 148 CD2 0.079 REMARK 500 SER B 195 CB SER B 195 OG -0.118 REMARK 500 HIS D 71 CG HIS D 71 CD2 0.059 REMARK 500 TRP D 96 CE2 TRP D 96 CD2 0.072 REMARK 500 SER D 195 CB SER D 195 OG -0.112 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 14G CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 ARG A 15 NE - CZ - NH1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ARG B 67 CD - NE - CZ ANGL. DEV. = -9.3 DEGREES REMARK 500 ARG B 75 CA - CB - CG ANGL. DEV. = 15.9 DEGREES REMARK 500 ARG B 97 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG B 101 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 CYS B 122 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 TYR B 134 CB - CG - CD2 ANGL. DEV. = -8.0 DEGREES REMARK 500 TYR B 134 CB - CG - CD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 LEU B 144 CA - CB - CG ANGL. DEV. = -14.3 DEGREES REMARK 500 CYS B 182 CA - CB - SG ANGL. DEV. = 9.6 DEGREES REMARK 500 CYS B 220 CA - CB - SG ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG B 221 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG B 233 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 LEU C 14G N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 ILE C 14K N - CA - CB ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG D 50 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG D 67 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG D 75 N - CA - CB ANGL. DEV. = -11.0 DEGREES REMARK 500 CYS D 122 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG D 126 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 GLN D 131 CA - CB - CG ANGL. DEV. = -15.0 DEGREES REMARK 500 TYR D 134 CB - CG - CD2 ANGL. DEV. = -3.9 DEGREES REMARK 500 GLN D 151 CB - CA - C ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG D 165 CD - NE - CZ ANGL. DEV. = -10.7 DEGREES REMARK 500 ARG D 165 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG D 175 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 CYS D 182 CA - CB - SG ANGL. DEV. = 10.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 1G -155.02 -86.05 REMARK 500 GLU A 1C 93.81 -51.49 REMARK 500 ALA A 1B -106.45 167.93 REMARK 500 PRO A 5 -34.70 -35.70 REMARK 500 PHE A 7 -90.59 -130.55 REMARK 500 GLU A 8 -73.48 -40.50 REMARK 500 LYS A 14A -19.76 -45.14 REMARK 500 THR A 14B -17.79 -142.01 REMARK 500 GLU A 14C -46.80 -22.67 REMARK 500 GLU A 14H -19.05 -46.83 REMARK 500 ILE A 14K 76.17 11.27 REMARK 500 ASP A 14L 18.91 31.65 REMARK 500 HIS B 57 -5.52 -53.41 REMARK 500 PRO B 60C 1.30 -57.66 REMARK 500 GLU B 61 -70.51 -20.24 REMARK 500 ASN B 62 13.55 -52.68 REMARK 500 HIS B 71 -57.57 -120.02 REMARK 500 ARG B 93 7.29 171.83 REMARK 500 ASN B 98 23.26 -151.59 REMARK 500 ASP B 102 70.68 -48.55 REMARK 500 LYS B 145 -155.46 -158.37 REMARK 500 THR B 147 65.20 -65.01 REMARK 500 ASN B 149B -152.94 -151.65 REMARK 500 VAL B 149C 66.44 -105.35 REMARK 500 LEU B 155 132.84 -36.46 REMARK 500 ASN B 179 36.47 -94.36 REMARK 500 SER B 214 -70.40 -114.93 REMARK 500 ASP B 222 112.20 -34.79 REMARK 500 ASP B 243 31.55 -78.62 REMARK 500 GLN B 244 -72.60 -92.13 REMARK 500 PHE C 1G -78.53 -47.08 REMARK 500 SER C 1E -38.84 175.00 REMARK 500 GLU C 1C -71.09 73.99 REMARK 500 ALA C 1B -69.59 -16.75 REMARK 500 ASP C 1A 25.92 -74.75 REMARK 500 PRO C 5 6.10 -67.96 REMARK 500 PHE C 7 -77.62 -138.16 REMARK 500 GLU C 14H -82.91 -28.83 REMARK 500 SER C 14I 80.24 -69.69 REMARK 500 TYR C 14J 59.74 -91.83 REMARK 500 ILE C 14K -85.69 79.59 REMARK 500 ASP C 14L -74.16 -108.94 REMARK 500 ASP D 60E 3.23 48.52 REMARK 500 ASN D 60G 71.35 -153.11 REMARK 500 GLU D 61 -45.65 -23.60 REMARK 500 ARG D 75 101.21 -35.59 REMARK 500 ASN D 78 37.78 -81.39 REMARK 500 ILE D 79 -61.73 -134.82 REMARK 500 ILE D 82 96.92 -64.54 REMARK 500 PRO D 92 -14.07 -43.77 REMARK 500 REMARK 500 THIS ENTRY HAS 67 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 1H PHE A 1G 131.64 REMARK 500 PHE A 1G GLY A 1F -104.40 REMARK 500 GLY A 1D GLU A 1C 149.52 REMARK 500 TYR A 14J ILE A 14K -149.22 REMARK 500 ASP A 14L GLY A 14M -144.19 REMARK 500 GLU B 77 ARG B 77A -141.37 REMARK 500 GLY B 142 ASN B 143 -145.21 REMARK 500 TRP B 148 THR B 149 123.33 REMARK 500 ALA B 149A ASN B 149B -136.48 REMARK 500 GLY B 246 GLU B 247 -138.13 REMARK 500 PHE C 1G GLY C 1F 140.61 REMARK 500 GLY C 1F SER C 1E -124.55 REMARK 500 GLY C 14M ARG C 15 139.86 REMARK 500 LYS D 81 ILE D 82 149.68 REMARK 500 GLU D 146 THR D 147 -139.17 REMARK 500 THR D 147 TRP D 148 -136.54 REMARK 500 ASP D 186A GLU D 186B -143.40 REMARK 500 GLY D 246 GLU D 247 -141.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 14J 0.08 SIDE CHAIN REMARK 500 ARG A 15 0.10 SIDE CHAIN REMARK 500 ARG B 67 0.18 SIDE CHAIN REMARK 500 ARG B 137 0.09 SIDE CHAIN REMARK 500 ARG B 187 0.11 SIDE CHAIN REMARK 500 ARG B 221 0.09 SIDE CHAIN REMARK 500 TYR C 14J 0.07 SIDE CHAIN REMARK 500 ARG D 93 0.09 SIDE CHAIN REMARK 500 TYR D 134 0.08 SIDE CHAIN REMARK 500 ARG D 165 0.21 SIDE CHAIN REMARK 500 ARG D 173 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: NUL REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: CATALYTIC TRIAD OF SERINE PROTEINASES IN TWO REMARK 800 MOLECULES OF DIMER. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GR3 B 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GR3 D 1 DBREF 1AWH A 1 15 UNP P00734 THRB_HUMAN 328 363 DBREF 1AWH B 16 247 UNP P00734 THRB_HUMAN 364 622 DBREF 1AWH C 1 15 UNP P00734 THRB_HUMAN 328 363 DBREF 1AWH D 16 247 UNP P00734 THRB_HUMAN 364 622 SEQRES 1 A 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 A 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 A 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 B 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 B 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 B 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 B 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 B 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 B 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 B 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 B 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 B 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 B 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 B 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 B 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 B 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 B 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 B 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 B 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 B 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 B 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 B 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 B 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 C 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 C 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 C 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 D 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 D 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 D 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 D 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 D 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 D 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 D 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 D 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 D 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 D 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 D 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 D 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 D 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 D 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 D 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 D 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 D 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 D 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 D 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 D 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU HET GR3 B 1 39 HET GR3 D 1 39 HETNAM GR3 3-ACETOXY-17-(1-FORMYL-5-METHYL-3-OXO-HEX-4-ENYL)-16- HETNAM 2 GR3 HYDROXY-4,10,13,14-TETRAMETHYL-2,3,4,5,6,9,10,11,12, HETNAM 3 GR3 13,14,15,16,17-TETRADECAHYDRO-1H- HETNAM 4 GR3 CYCLOPENTA[A]PHENANTHRENE-4-CARBOXYLIC ACID FORMUL 5 GR3 2(C32 H46 O7) FORMUL 7 HOH *2(H2 O) HELIX 1 1 GLU A 14C ASP A 14L 1 10 HELIX 2 2 ALA B 56 LEU B 59 1 4 HELIX 3 3 PRO B 60B TRP B 60D 5 3 HELIX 4 4 GLU B 61 ASP B 63 5 3 HELIX 5 5 ARG B 126 LEU B 129C 1 7 HELIX 6 6 ARG B 165 LYS B 169 1 5 HELIX 7 7 PRO B 186 GLU B 186B 5 3 HELIX 8 8 VAL B 231 ILE B 242 1 12 HELIX 9 9 LYS C 14A GLU C 14H 5 8 HELIX 10 10 ALA D 56 LEU D 59 1 4 HELIX 11 11 PRO D 60B TRP D 60D 5 3 HELIX 12 12 ARG D 126 LEU D 129C 1 7 HELIX 13 13 ARG D 165 SER D 171 1 7 HELIX 14 14 PRO D 186 GLU D 186B 5 3 HELIX 15 15 VAL D 231 ASP D 243 1 13 SHEET 1 A 4 LYS B 81 MET B 84 0 SHEET 2 A 4 LEU B 64 ILE B 68 -1 N ILE B 68 O LYS B 81 SHEET 3 A 4 GLN B 30 ARG B 35 -1 N PHE B 34 O LEU B 65 SHEET 4 A 4 GLU B 39 SER B 45 -1 N ALA B 44 O VAL B 31 SHEET 1 B 3 TRP B 51 THR B 54 0 SHEET 2 B 3 ALA B 104 LEU B 108 -1 N MET B 106 O VAL B 52 SHEET 3 B 3 LEU B 85 ILE B 90 -1 N TYR B 89 O LEU B 105 SHEET 1 C 2 LYS B 135 GLY B 140 0 SHEET 2 C 2 GLN B 156 PRO B 161 -1 N LEU B 160 O GLY B 136 SHEET 1 D 4 MET B 180 ALA B 183 0 SHEET 2 D 4 GLY B 226 HIS B 230 -1 N TYR B 228 O PHE B 181 SHEET 3 D 4 ARG B 206 TRP B 215 -1 N TRP B 215 O PHE B 227 SHEET 4 D 4 PRO B 198 SER B 203 -1 N SER B 203 O ARG B 206 SHEET 1 E 7 ILE D 82 MET D 84 0 SHEET 2 E 7 LEU D 64 ILE D 68 -1 N VAL D 66 O SER D 83 SHEET 3 E 7 GLN D 30 ARG D 35 -1 N PHE D 34 O LEU D 65 SHEET 4 E 7 GLU D 39 SER D 48 -1 N ALA D 44 O VAL D 31 SHEET 5 E 7 TRP D 51 THR D 54 -1 N LEU D 53 O SER D 45 SHEET 6 E 7 ALA D 104 LEU D 108 -1 N MET D 106 O VAL D 52 SHEET 7 E 7 LEU D 85 ILE D 90 -1 N TYR D 89 O LEU D 105 SHEET 1 F 2 LYS D 135 GLY D 140 0 SHEET 2 F 2 GLN D 156 PRO D 161 -1 N LEU D 160 O GLY D 136 SHEET 1 G 4 MET D 180 ALA D 183 0 SHEET 2 G 4 GLY D 226 HIS D 230 -1 N TYR D 228 O PHE D 181 SHEET 3 G 4 TRP D 207 TRP D 215 -1 N TRP D 215 O PHE D 227 SHEET 4 G 4 PRO D 198 LYS D 202 -1 N MET D 201 O TYR D 208 SSBOND 1 CYS A 1 CYS B 122 1555 1555 1.95 SSBOND 2 CYS B 42 CYS B 58 1555 1555 2.01 SSBOND 3 CYS B 168 CYS B 182 1555 1555 2.05 SSBOND 4 CYS B 191 CYS B 220 1555 1555 2.01 SSBOND 5 CYS C 1 CYS D 122 1555 1555 2.02 SSBOND 6 CYS D 42 CYS D 58 1555 1555 2.00 SSBOND 7 CYS D 168 CYS D 182 1555 1555 1.99 SSBOND 8 CYS D 191 CYS D 220 1555 1555 1.95 LINK C21 GR3 B 1 OG SER B 195 1555 1555 1.23 LINK C21 GR3 D 1 OG SER D 195 1555 1555 1.21 CISPEP 1 SER B 37 PRO B 37A 0 -8.24 CISPEP 2 SER D 37 PRO D 37A 0 -0.77 SITE 1 NUL 5 HIS B 57 ASP B 102 SER B 195 HIS D 57 SITE 2 NUL 5 SER D 195 SITE 1 AC1 13 HIS B 57 TYR B 60A ALA B 190 CYS B 191 SITE 2 AC1 13 GLU B 192 GLY B 193 ASP B 194 SER B 195 SITE 3 AC1 13 SER B 214 TRP B 215 GLY B 216 GLY B 219 SITE 4 AC1 13 HOH B 248 SITE 1 AC2 15 HOH D 2 HIS D 57 TYR D 60A TRP D 60D SITE 2 AC2 15 ASP D 189 ALA D 190 CYS D 191 GLU D 192 SITE 3 AC2 15 GLY D 193 ASP D 194 SER D 195 SER D 214 SITE 4 AC2 15 TRP D 215 GLY D 216 GLY D 219 CRYST1 65.600 102.800 119.700 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015244 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009728 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008354 0.00000