PDB Short entry for 1BAK HEADER TRANSFERASE 21-NOV-97 1BAK TITLE SIGNAL TRANSDUCTION PLECKSTRIN HOMOLOGY DOMAIN OF G-PROTEIN COUPLED TITLE 2 RECEPTOR KINASE 2 (BETA-ADRENERGIC RECEPTOR KINASE 1), C-TERMINAL TITLE 3 EXTENDED, NMR, 20 STRUCTURES COMPND MOL_ID: 1; COMPND 2 MOLECULE: G-PROTEIN COUPLED RECEPTOR KINASE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C-TERMINAL EXTENDED PLECKSTRIN HOMOLOGY DOMAIN; COMPND 5 SYNONYM: GRK-2, BETA-ADRENERGIC RECEPTOR KINASE 1, BETA-ARK 1; COMPND 6 EC: 2.7.1.126; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLECKSTRIN HOMOLOGY DOMAIN, PH DOMAIN, SIGNAL TRANSDUCTION, G-BETA- KEYWDS 2 GAMMA BINDING DOMAIN, BETA-ADRENERGIC RECEPTOR KINASE, BETA-ARK, G- KEYWDS 3 PROTEIN COUPLED RECEPTOR KINASE (GRK-2), TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR D.FUSHMAN,D.COWBURN REVDAT 4 16-FEB-22 1BAK 1 REMARK REVDAT 3 24-FEB-09 1BAK 1 VERSN REVDAT 2 01-APR-03 1BAK 1 JRNL REVDAT 1 25-FEB-98 1BAK 0 JRNL AUTH D.FUSHMAN,T.NAJMABADI-HASKE,S.CAHILL,J.ZHENG,H.LEVINE 3RD., JRNL AUTH 2 D.COWBURN JRNL TITL THE SOLUTION STRUCTURE AND DYNAMICS OF THE PLECKSTRIN JRNL TITL 2 HOMOLOGY DOMAIN OF G PROTEIN-COUPLED RECEPTOR KINASE 2 JRNL TITL 3 (BETA-ADRENERGIC RECEPTOR KINASE 1). A BINDING PARTNER OF JRNL TITL 4 GBETAGAMMA SUBUNITS. JRNL REF J.BIOL.CHEM. V. 273 2835 1998 JRNL REFN ISSN 0021-9258 JRNL PMID 9446593 JRNL DOI 10.1074/JBC.273.5.2835 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.MAHADEVAN,N.THANKI,J.SINGH,P.MCPHIE,D.ZANGRILLI,L.M.WANG, REMARK 1 AUTH 2 C.GUERRERO,H.LEVINE III,C.HUMBLET,J.SALDANHA,J.S.GUTKIND, REMARK 1 AUTH 3 T.NAJMABADI-HASKE REMARK 1 TITL STRUCTURAL STUDIES ON THE PH DOMAINS OF DBL, SOS1, IRS-1, REMARK 1 TITL 2 AND BETA ARK1 AND THEIR DIFFERENTIAL BINDING TO G BETA GAMMA REMARK 1 TITL 3 SUBUNITS REMARK 1 REF BIOCHEMISTRY V. 34 9111 1995 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.TOUHARA,J.INGLESE,J.A.PITCHER,G.SHAW,R.J.LEFKOWITZ REMARK 1 TITL BINDING OF G PROTEIN BETA GAMMA-SUBUNITS TO PLECKSTRIN REMARK 1 TITL 2 HOMOLOGY DOMAINS REMARK 1 REF J.BIOL.CHEM. V. 269 10217 1994 REMARK 1 REFN ISSN 0021-9258 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR, DYANA REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BAK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171529. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 4.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1H-15N)HSQC; (1H-13C)HSQC; HSQC REMARK 210 -J; HTQC; 2D AND 3D 15N-NOESY- REMARK 210 HMQC (IN H2O; IN D2O) AND HOHAHA- REMARK 210 HMQC; 13C-NOESY-HMQC; HCCH-TOCSY; REMARK 210 CBCANH; CBCA(CO)NH; HNCA; HN(CO) REMARK 210 CA; HNCO; {1H}15N-NOE; H2O- REMARK 210 SELECTIVE 15N-EDITED NOESY AND REMARK 210 ROESY; H-D-EXCHANGE REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX500; DMX600 REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, DIANA, DYANA REMARK 210 METHOD USED : DISTANCE GEOMETRY REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : LEAST RESTRAINT VIOLATION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 644 H ARG A 648 1.47 REMARK 500 O GLU A 610 H LEU A 621 1.50 REMARK 500 H THR A 612 O CYS A 619 1.55 REMARK 500 O ASP A 649 H GLU A 653 1.60 REMARK 500 O PRO A 638 H GLN A 642 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 553 78.62 48.45 REMARK 500 1 HIS A 554 -60.93 -146.82 REMARK 500 1 ASP A 558 -107.68 -77.94 REMARK 500 1 MET A 568 -179.97 157.57 REMARK 500 1 ASN A 570 -59.46 -168.88 REMARK 500 1 ASN A 586 -38.28 -165.58 REMARK 500 1 LEU A 588 119.85 177.72 REMARK 500 1 SER A 599 51.84 -155.08 REMARK 500 1 THR A 602 -159.68 -123.74 REMARK 500 1 GLU A 605 -53.90 -158.05 REMARK 500 1 ILE A 606 136.98 -29.46 REMARK 500 1 SER A 608 134.29 -173.72 REMARK 500 1 LYS A 615 -32.98 82.13 REMARK 500 1 GLU A 616 -50.42 -156.38 REMARK 500 1 LYS A 618 -98.55 -124.29 REMARK 500 1 LEU A 622 89.67 -154.82 REMARK 500 1 GLU A 639 -79.98 -26.95 REMARK 500 1 ARG A 660 65.85 -68.07 REMARK 500 1 MET A 664 85.14 61.64 REMARK 500 1 LYS A 665 -62.66 -151.16 REMARK 500 1 ASN A 666 -58.11 75.95 REMARK 500 1 LYS A 667 91.42 48.07 REMARK 500 1 ARG A 669 153.47 63.04 REMARK 500 2 LYS A 557 -106.46 -130.61 REMARK 500 2 ASP A 558 22.81 -152.49 REMARK 500 2 CYS A 559 128.48 -170.30 REMARK 500 2 THR A 574 -16.50 -158.21 REMARK 500 2 ASN A 586 -41.79 -164.74 REMARK 500 2 LEU A 588 116.61 178.97 REMARK 500 2 GLU A 595 145.99 -175.21 REMARK 500 2 ALA A 596 160.42 177.33 REMARK 500 2 PRO A 597 -163.55 -74.98 REMARK 500 2 THR A 602 -162.72 -114.29 REMARK 500 2 GLU A 605 -53.55 -158.70 REMARK 500 2 ILE A 606 139.41 -32.43 REMARK 500 2 SER A 608 135.24 -174.05 REMARK 500 2 LYS A 615 -32.92 81.51 REMARK 500 2 GLU A 616 -47.95 -156.92 REMARK 500 2 LYS A 618 -98.20 -119.20 REMARK 500 2 LEU A 622 84.60 -160.25 REMARK 500 2 GLU A 639 -83.42 -23.05 REMARK 500 2 ARG A 652 -70.73 -76.57 REMARK 500 2 GLU A 653 -33.17 -36.25 REMARK 500 2 GLN A 659 45.33 -84.79 REMARK 500 2 MET A 664 57.26 -162.56 REMARK 500 2 LYS A 665 62.66 -170.61 REMARK 500 2 ARG A 669 167.25 55.83 REMARK 500 3 SER A 553 117.58 66.02 REMARK 500 3 HIS A 554 72.16 -175.29 REMARK 500 3 LYS A 557 70.45 -152.57 REMARK 500 REMARK 500 THIS ENTRY HAS 424 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1BAK A 556 670 UNP P25098 ARBK1_HUMAN 556 670 SEQRES 1 A 119 GLY SER HIS MET GLY LYS ASP CYS ILE MET HIS GLY TYR SEQRES 2 A 119 MET SER LYS MET GLY ASN PRO PHE LEU THR GLN TRP GLN SEQRES 3 A 119 ARG ARG TYR PHE TYR LEU PHE PRO ASN ARG LEU GLU TRP SEQRES 4 A 119 ARG GLY GLU GLY GLU ALA PRO GLN SER LEU LEU THR MET SEQRES 5 A 119 GLU GLU ILE GLN SER VAL GLU GLU THR GLN ILE LYS GLU SEQRES 6 A 119 ARG LYS CYS LEU LEU LEU LYS ILE ARG GLY GLY LYS GLN SEQRES 7 A 119 PHE ILE LEU GLN CYS ASP SER ASP PRO GLU LEU VAL GLN SEQRES 8 A 119 TRP LYS LYS GLU LEU ARG ASP ALA TYR ARG GLU ALA GLN SEQRES 9 A 119 GLN LEU VAL GLN ARG VAL PRO LYS MET LYS ASN LYS PRO SEQRES 10 A 119 ARG SER HELIX 1 1 ASP A 637 VAL A 658 1 22 SHEET 1 A 7 ILE A 606 THR A 612 0 SHEET 2 A 7 CYS A 619 ILE A 624 -1 N LYS A 623 O GLN A 607 SHEET 3 A 7 GLN A 629 GLN A 633 -1 N LEU A 632 O LEU A 620 SHEET 4 A 7 MET A 561 MET A 568 -1 N MET A 568 O ILE A 631 SHEET 5 A 7 ARG A 578 LEU A 583 -1 N LEU A 583 O MET A 561 SHEET 6 A 7 ARG A 587 ARG A 591 -1 N ARG A 591 O TYR A 580 SHEET 7 A 7 LEU A 600 THR A 602 -1 N LEU A 601 O LEU A 588 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000