PDB Short entry for 1BCR HEADER HYDROLASE/HYDROLASE INHIBITOR 03-NOV-95 1BCR TITLE COMPLEX OF THE WHEAT SERINE CARBOXYPEPTIDASE, CPDW-II, WITH THE TITLE 2 MICROBIAL PEPTIDE ALDEHYDE INHIBITOR, ANTIPAIN, AND ARGININE AT ROOM TITLE 3 TEMPERATURE CAVEAT 1BCR FUC D 2 HAS WRONG CHIRALITY AT ATOM C5 NAG E 2 HAS WRONG CAVEAT 2 1BCR CHIRALITY AT ATOM C2 NAG A 1131 HAS WRONG CHIRALITY AT ATOM CAVEAT 3 1BCR C2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE CARBOXYPEPTIDASE II; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.16.6; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SERINE CARBOXYPEPTIDASE II; COMPND 7 CHAIN: B; COMPND 8 EC: 3.4.16.6; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: ANTIPAIN; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 3 ORGANISM_COMMON: BREAD WHEAT; SOURCE 4 ORGANISM_TAXID: 4565; SOURCE 5 TISSUE: WHEAT GERM; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: TRITICUM AESTIVUM; SOURCE 8 ORGANISM_COMMON: BREAD WHEAT; SOURCE 9 ORGANISM_TAXID: 4565; SOURCE 10 TISSUE: WHEAT GERM; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: ACTINOBACTERIA; SOURCE 14 ORGANISM_TAXID: 1760 KEYWDS MICROBIAL PEPTIDE ALDEHYDE INHIBITOR, SERINE PROTEASE-INHIBITOR KEYWDS 2 COMPLEX, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR T.L.BULLOCK,S.J.REMINGTON REVDAT 9 15-NOV-23 1BCR 1 HETSYN LINK ATOM REVDAT 8 29-JUL-20 1BCR 1 CAVEAT COMPND REMARK HETNAM REVDAT 8 2 1 LINK SITE ATOM REVDAT 7 15-MAY-19 1BCR 1 CAVEAT REMARK SEQRES LINK REVDAT 6 05-JUN-13 1BCR 1 HETATM REVDAT 5 05-SEP-12 1BCR 1 REMARK REVDAT 4 28-DEC-11 1BCR 1 ATOM HET HETATM SEQRES REVDAT 3 13-JUL-11 1BCR 1 VERSN REVDAT 2 24-FEB-09 1BCR 1 VERSN REVDAT 1 08-MAR-96 1BCR 0 JRNL AUTH T.L.BULLOCK,K.BREDDAM,S.J.REMINGTON JRNL TITL PEPTIDE ALDEHYDE COMPLEXES WITH WHEAT SERINE JRNL TITL 2 CARBOXYPEPTIDASE II: IMPLICATIONS FOR THE CATALYTIC JRNL TITL 3 MECHANISM AND SUBSTRATE SPECIFICITY. JRNL REF J.MOL.BIOL. V. 255 714 1996 JRNL REFN ISSN 0022-2836 JRNL PMID 8636973 JRNL DOI 10.1006/JMBI.1996.0058 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH T.L.BULLOCK,B.BRANCHAUD,S.J.REMINGTON REMARK 1 TITL STRUCTURE OF THE COMPLEX OF L-BENZYLSUCCINATE WITH WHEAT REMARK 1 TITL 2 SERINE CARBOXYPEPTIDASE AT 2.0 ANGSTROM RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 33 11127 1994 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.I.LIAO,K.BREDDAM,R.M.SWEET,T.BULLOCK,S.J.REMINGTON REMARK 1 TITL REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT REMARK 1 TITL 2 2.2 ANGSTROM RESOLUTION REMARK 1 REF BIOCHEMISTRY V. 31 9796 1992 REMARK 1 REFN ISSN 0006-2960 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 29444 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3205 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 192 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.016 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : 2.530 ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : 0.019 ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BCR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171598. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 290 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : R-AXIS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 2.230 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.75000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.20000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.37500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.20000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 157.12500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.20000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.37500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.20000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.20000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 157.12500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 104.75000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 98.40000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 98.40000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 104.75000 REMARK 400 REMARK 400 COMPOUND REMARK 400 REMARK 400 THE ANTIPAIN IS OLIGOPEPTIDE, A MEMBER OF ENZYME INHIBITOR CLASS. REMARK 400 REMARK 400 GROUP: 1 REMARK 400 NAME: ANTIPAIN REMARK 400 CHAIN: C REMARK 400 COMPONENT_1: PEPTIDE LIKE POLYMER REMARK 400 DESCRIPTION: NULL REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A -9 REMARK 465 GLU A -8 REMARK 465 PRO A -7 REMARK 465 SER A -6 REMARK 465 GLY A -5 REMARK 465 ILE A 248 REMARK 465 THR A 249 REMARK 465 SER A 250 REMARK 465 SER A 251 REMARK 465 THR B 262 REMARK 465 GLY B 263 REMARK 465 GLN B 423 REMARK 465 THR B 424 REMARK 465 LYS B 425 REMARK 465 ASN B 426 REMARK 465 ALA B 427 REMARK 465 THR B 428 REMARK 465 FC0 C 1 REMARK 465 ARG C 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 24 CD OE1 OE2 REMARK 470 ARG A 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 163 CD CE NZ REMARK 470 ARG B 282 CD NE CZ NH1 NH2 REMARK 470 THR B 293 CB OG1 CG2 REMARK 470 ASN B 297 CB CG OD1 ND2 REMARK 470 GLN B 375A CB CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C4 NAG E 1 C1 NAG E 2 1.89 REMARK 500 CG ASN A 105 C1 NAG D 1 2.03 REMARK 500 C3 NAG D 1 C1 FUC D 2 2.17 REMARK 500 ND2 ASN B 291 O5 NAG E 1 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 39 CD GLU A 39 OE1 0.080 REMARK 500 GLU A 81 CD GLU A 81 OE1 0.083 REMARK 500 GLU A 208 CD GLU A 208 OE1 0.082 REMARK 500 GLU B 376 CD GLU B 376 OE2 0.075 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A -1 CB - CG - OD1 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 11 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 11 CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 23A CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 23A CB - CG - OD2 ANGL. DEV. = -6.2 DEGREES REMARK 500 ASP A 94 CB - CG - OD2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ARG A 114 NE - CZ - NH1 ANGL. DEV. = 7.8 DEGREES REMARK 500 ARG A 114 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ARG A 129 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ASP A 139 CB - CG - OD1 ANGL. DEV. = -7.1 DEGREES REMARK 500 ASP A 139 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 PHE A 140 N - CA - CB ANGL. DEV. = -12.5 DEGREES REMARK 500 GLU A 145 CB - CA - C ANGL. DEV. = -14.3 DEGREES REMARK 500 TYR A 151 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP A 180 CB - CG - OD1 ANGL. DEV. = -5.7 DEGREES REMARK 500 ASP A 180 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP A 181 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 200 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP A 201 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 TYR A 203 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 TYR A 203 CB - CG - CD1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 204 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 205 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ASP A 223 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP A 223 CB - CG - OD2 ANGL. DEV. = -7.6 DEGREES REMARK 500 ASP A 227 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ASP B 266 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 ASP B 266 CB - CG - OD2 ANGL. DEV. = -8.8 DEGREES REMARK 500 ASP B 283 N - CA - CB ANGL. DEV. = -13.5 DEGREES REMARK 500 PRO B 342 C - N - CD ANGL. DEV. = -15.3 DEGREES REMARK 500 ARG B 347 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ASP B 374 CB - CG - OD1 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 393 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 TYR B 413 CB - CG - CD1 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 60 -75.31 -92.17 REMARK 500 GLU A 64 27.48 -142.64 REMARK 500 GLU A 65 -105.54 -139.67 REMARK 500 SER A 107 -27.49 -31.86 REMARK 500 SER A 146 -118.91 46.97 REMARK 500 ALA A 148 1.29 -64.73 REMARK 500 ILE A 179 -44.18 -142.45 REMARK 500 HIS A 217 57.65 -142.49 REMARK 500 HIS B 289 33.48 75.43 REMARK 500 ASN B 297 53.07 -68.42 REMARK 500 TYR B 298 -174.78 -174.56 REMARK 500 HIS B 308B -113.22 -106.47 REMARK 500 ALA B 309 108.98 -179.75 REMARK 500 TRP B 369 117.48 -35.46 REMARK 500 ASP B 375 -130.57 70.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1238 DISTANCE = 9.11 ANGSTROMS REMARK 525 HOH A1245 DISTANCE = 7.31 ANGSTROMS DBREF 1BCR A -9 251 UNP P08819 CBP2_WHEAT 1 263 DBREF 1BCR B 262 428 UNP P08819 CBP2_WHEAT 264 423 DBREF 1BCR C 1 4 PDB 1BCR 1BCR 1 4 SEQRES 1 A 263 VAL GLU PRO SER GLY HIS ALA ALA ASP ARG ILE ALA ARG SEQRES 2 A 263 LEU PRO GLY GLN PRO ALA VAL ASP PHE ASP MET TYR SER SEQRES 3 A 263 GLY TYR ILE THR VAL ASP GLU GLY ALA GLY ARG SER LEU SEQRES 4 A 263 PHE TYR LEU LEU GLN GLU ALA PRO GLU ASP ALA GLN PRO SEQRES 5 A 263 ALA PRO LEU VAL LEU TRP LEU ASN GLY GLY PRO GLY CYS SEQRES 6 A 263 SER SER VAL ALA TYR GLY ALA SER GLU GLU LEU GLY ALA SEQRES 7 A 263 PHE ARG VAL LYS PRO ARG GLY ALA GLY LEU VAL LEU ASN SEQRES 8 A 263 GLU TYR ARG TRP ASN LYS VAL ALA ASN VAL LEU PHE LEU SEQRES 9 A 263 ASP SER PRO ALA GLY VAL GLY PHE SER TYR THR ASN THR SEQRES 10 A 263 SER SER ASP ILE TYR THR SER GLY ASP ASN ARG THR ALA SEQRES 11 A 263 HIS ASP SER TYR ALA PHE LEU ALA LYS TRP PHE GLU ARG SEQRES 12 A 263 PHE PRO HIS TYR LYS TYR ARG ASP PHE TYR ILE ALA GLY SEQRES 13 A 263 GLU SER TYR ALA GLY HIS TYR VAL PRO GLU LEU SER GLN SEQRES 14 A 263 LEU VAL HIS ARG SER LYS ASN PRO VAL ILE ASN LEU LYS SEQRES 15 A 263 GLY PHE MET VAL GLY ASN GLY LEU ILE ASP ASP TYR HIS SEQRES 16 A 263 ASP TYR VAL GLY THR PHE GLU PHE TRP TRP ASN HIS GLY SEQRES 17 A 263 ILE VAL SER ASP ASP THR TYR ARG ARG LEU LYS GLU ALA SEQRES 18 A 263 CYS LEU HIS ASP SER PHE ILE HIS PRO SER PRO ALA CYS SEQRES 19 A 263 ASP ALA ALA THR ASP VAL ALA THR ALA GLU GLN GLY ASN SEQRES 20 A 263 ILE ASP MET TYR SER LEU TYR THR PRO VAL CYS ASN ILE SEQRES 21 A 263 THR SER SER SEQRES 1 B 160 THR GLY SER TYR ASP PRO CYS THR GLU ARG TYR SER THR SEQRES 2 B 160 ALA TYR TYR ASN ARG ARG ASP VAL GLN MET ALA LEU HIS SEQRES 3 B 160 ALA ASN VAL THR GLY ALA MET ASN TYR THR TRP ALA THR SEQRES 4 B 160 CYS SER ASP THR ILE ASN THR HIS TRP HIS ASP ALA PRO SEQRES 5 B 160 ARG SER MET LEU PRO ILE TYR ARG GLU LEU ILE ALA ALA SEQRES 6 B 160 GLY LEU ARG ILE TRP VAL PHE SER GLY ASP THR ASP ALA SEQRES 7 B 160 VAL VAL PRO LEU THR ALA THR ARG TYR SER ILE GLY ALA SEQRES 8 B 160 LEU GLY LEU PRO THR THR THR SER TRP TYR PRO TRP TYR SEQRES 9 B 160 ASP ASP GLN GLU VAL GLY GLY TRP SER GLN VAL TYR LYS SEQRES 10 B 160 GLY LEU THR LEU VAL SER VAL ARG GLY ALA GLY HIS GLU SEQRES 11 B 160 VAL PRO LEU HIS ARG PRO ARG GLN ALA LEU VAL LEU PHE SEQRES 12 B 160 GLN TYR PHE LEU GLN GLY LYS PRO MET PRO GLY GLN THR SEQRES 13 B 160 LYS ASN ALA THR SEQRES 1 C 4 FC0 ARG VAL OAR MODRES 1BCR ASN A 105 ASN GLYCOSYLATION SITE MODRES 1BCR ASN B 291 ASN GLYCOSYLATION SITE MODRES 1BCR ASN A 113 ASN GLYCOSYLATION SITE MODRES 1BCR OAR C 4 ARG N-(4-AMINO-5-HYDROXY-PENTYL)-GUANIDINE HET OAR C 4 11 HET NAG D 1 14 HET FUC D 2 10 HET NAG D 3 14 HET NAG E 1 14 HET NAG E 2 14 HET NAG A1131 14 HET ARG A 426 12 HETNAM OAR N-(4-AMINO-5-HYDROXY-PENTYL)-GUANIDINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM ARG ARGININE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 3 OAR C6 H16 N4 O FORMUL 4 NAG 5(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 7 ARG C6 H15 N4 O2 1+ FORMUL 8 HOH *192(H2 O) HELIX 1 1 HIS A -4 ARG A 0 5 5 HELIX 2 2 PRO A 38 GLN A 42 5 5 HELIX 3 3 TYR A 60 GLU A 65 1 6 HELIX 4 4 PRO A 73 ALA A 76 5 4 HELIX 5 5 ARG A 83 VAL A 87 5 5 HELIX 6 6 THR A 106 THR A 112 5 7 HELIX 7 7 GLY A 112B PHE A 130 1 20 HELIX 8 8 PRO A 131 LYS A 134 5 4 HELIX 9 9 TYR A 147 LYS A 163 1 17 HELIX 10 10 ASP A 180 ASN A 194 1 15 HELIX 11 11 SER A 199 LEU A 211 1 13 HELIX 12 12 SER A 219 GLY A 234 1 16 HELIX 13 13 CYS B 268 TYR B 279 1 10 HELIX 14 14 ARG B 281 HIS B 289 1 9 HELIX 15 15 SER B 303A HIS B 308 1 7 HELIX 16 16 MET B 313 GLY B 324 1 12 HELIX 17 17 PRO B 342 ALA B 352 1 11 HELIX 18 18 GLU B 398 ARG B 403 1 6 HELIX 19 19 ARG B 403 GLY B 417 1 15 SHEET 1 A10 MET A 16 ASP A 23A 0 SHEET 2 A10 ARG A 28 GLN A 35 -1 O ARG A 28 N VAL A 23 SHEET 3 A10 ASN A 89 LEU A 93 -1 O PHE A 92 N LEU A 33 SHEET 4 A10 LEU A 46 LEU A 50 1 N VAL A 47 O LEU A 91 SHEET 5 A10 ASP A 139 GLU A 145 1 O ALA A 143 N LEU A 50 SHEET 6 A10 ASN A 168 GLY A 175 1 O LYS A 170 N PHE A 140 SHEET 7 A10 ARG B 329 GLY B 335 1 O PHE B 333 N VAL A 174 SHEET 8 A10 LEU B 387 VAL B 392 1 O VAL B 392 N SER B 334 SHEET 9 A10 GLU B 376 TYR B 384 -1 N TRP B 380 O SER B 391 SHEET 10 A10 THR B 365 ASP B 374 -1 N TRP B 372 O GLY B 378 SHEET 1 B 2 PHE A 69 VAL A 71 0 SHEET 2 B 2 LEU A 77 LEU A 79 -1 O VAL A 78 N ARG A 70 SSBOND 1 CYS A 56 CYS B 303 1555 1555 2.05 SSBOND 2 CYS A 210 CYS A 222 1555 1555 2.01 SSBOND 3 CYS A 246 CYS B 268 1555 1555 1.95 LINK ND2 ASN A 105 C1 NAG D 1 1555 1555 1.33 LINK ND2 ASN A 113 C1 NAG A1131 1555 1555 1.35 LINK OG SER A 146 C OAR C 4 1555 1555 1.47 LINK ND2 ASN B 291 C1 NAG E 1 1555 1555 1.34 LINK C VAL C 3 N OAR C 4 1555 1555 1.38 LINK O3 NAG D 1 C1 FUC D 2 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 3 1555 1555 1.43 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.40 CISPEP 1 GLN A 42 PRO A 43 0 0.60 CISPEP 2 GLY A 53 PRO A 54 0 -3.96 CISPEP 3 SER A 95 PRO A 96 0 3.27 CRYST1 98.400 98.400 209.500 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010163 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010163 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004773 0.00000