PDB Short entry for 1BCT HEADER PHOTORECEPTOR 07-JUL-93 1BCT TITLE THREE-DIMENSIONAL STRUCTURE OF PROTEOLYTIC FRAGMENT 163-231 OF TITLE 2 BACTERIOOPSIN DETERMINED FROM NUCLEAR MAGNETIC RESONANCE DATA IN TITLE 3 SOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242 KEYWDS PHOTORECEPTOR EXPDTA SOLUTION NMR NUMMDL 14 AUTHOR D.E.NOLDE,I.L.BARSUKOV,A.L.LOMIZE,A.S.ARSENIEV REVDAT 4 16-FEB-22 1BCT 1 REMARK REVDAT 3 24-FEB-09 1BCT 1 VERSN REVDAT 2 15-OCT-94 1BCT 1 SOURCE JRNL REVDAT 1 30-APR-94 1BCT 0 JRNL AUTH I.L.BARSUKOV,D.E.NOLDE,A.L.LOMIZE,A.S.ARSENIEV JRNL TITL THREE-DIMENSIONAL STRUCTURE OF PROTEOLYTIC FRAGMENT 163-231 JRNL TITL 2 OF BACTERIOOPSIN DETERMINED FROM NUCLEAR MAGNETIC RESONANCE JRNL TITL 3 DATA IN SOLUTION. JRNL REF EUR.J.BIOCHEM. V. 206 665 1992 JRNL REFN ISSN 0014-2956 JRNL PMID 1606953 JRNL DOI 10.1111/J.1432-1033.1992.TB16972.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.L.BARSUKOV,G.V.ABDULAEVA,A.S.ARSENIEV,V.F.BYSTROV REMARK 1 TITL SEQUENCE-SPECIFIC 1H (SLASH)NMR ASSIGNMENT AND CONFORMATION REMARK 1 TITL 2 OF PROTEOLYTIC FRAGMENT 163-231 OF BACTERIOOPSIN REMARK 1 REF EUR.J.BIOCHEM. V. 192 321 1990 REMARK 1 REFN ISSN 0014-2956 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NULL REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BCT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171600. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 14 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 ARG A 164 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 2 ARG A 227 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 193 40.14 -163.09 REMARK 500 2 ARG A 164 86.32 -163.19 REMARK 500 2 SER A 193 69.72 -174.47 REMARK 500 3 GLU A 166 -174.66 -69.87 REMARK 500 3 SER A 193 76.72 -174.10 REMARK 500 3 GLU A 194 -71.04 -64.94 REMARK 500 3 ARG A 227 100.11 -55.22 REMARK 500 3 ILE A 229 -19.77 -145.98 REMARK 500 4 GLU A 166 -26.32 -144.92 REMARK 500 4 SER A 193 -57.48 -162.07 REMARK 500 4 GLU A 194 46.01 -150.43 REMARK 500 4 ARG A 225 -57.51 -158.60 REMARK 500 4 SER A 226 53.30 -157.83 REMARK 500 4 ARG A 227 -57.93 -154.40 REMARK 500 5 ARG A 164 -64.45 -163.20 REMARK 500 5 GLU A 166 -75.49 -81.45 REMARK 500 5 SER A 193 -49.64 -172.23 REMARK 500 5 GLU A 194 -45.48 -132.73 REMARK 500 5 ALA A 196 -7.29 -153.56 REMARK 500 5 ARG A 225 -66.66 -168.64 REMARK 500 5 ALA A 228 -64.36 -159.38 REMARK 500 6 ARG A 164 -58.54 -174.64 REMARK 500 6 PRO A 165 -81.52 -67.40 REMARK 500 6 GLU A 166 44.30 -78.27 REMARK 500 6 SER A 193 -55.49 -153.57 REMARK 500 6 GLU A 194 -66.98 -150.33 REMARK 500 6 ARG A 227 -57.80 -150.34 REMARK 500 7 GLU A 166 -166.39 62.83 REMARK 500 7 VAL A 167 -76.13 69.95 REMARK 500 7 SER A 193 -34.05 -155.74 REMARK 500 7 ARG A 225 -60.70 -161.14 REMARK 500 8 GLU A 166 -45.07 78.22 REMARK 500 8 VAL A 167 -172.40 55.65 REMARK 500 8 SER A 193 -40.81 -159.25 REMARK 500 8 GLU A 194 77.91 64.50 REMARK 500 8 ARG A 225 -56.53 -158.02 REMARK 500 8 SER A 226 43.80 -148.23 REMARK 500 8 ARG A 227 -47.22 -137.20 REMARK 500 8 ILE A 229 -78.63 -77.11 REMARK 500 9 ARG A 164 161.04 64.08 REMARK 500 9 PRO A 165 -164.02 -73.25 REMARK 500 9 SER A 193 24.97 -167.84 REMARK 500 9 GLU A 194 55.37 36.19 REMARK 500 9 ARG A 227 104.71 -58.04 REMARK 500 9 ILE A 229 -40.77 -140.61 REMARK 500 10 SER A 193 -42.34 -164.16 REMARK 500 11 ARG A 164 69.42 61.84 REMARK 500 11 VAL A 167 -170.74 52.16 REMARK 500 11 SER A 193 -10.68 -151.07 REMARK 500 11 GLU A 194 55.69 -158.48 REMARK 500 REMARK 500 THIS ENTRY HAS 81 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 163 ARG A 164 14 -149.59 REMARK 500 REMARK 500 REMARK: NULL DBREF 1BCT A 163 231 UNP P02945 BACR_HALN1 176 244 SEQRES 1 A 69 MET ARG PRO GLU VAL ALA SER THR PHE LYS VAL LEU ARG SEQRES 2 A 69 ASN VAL THR VAL VAL LEU TRP SER ALA TYR PRO VAL VAL SEQRES 3 A 69 TRP LEU ILE GLY SER GLU GLY ALA GLY ILE VAL PRO LEU SEQRES 4 A 69 ASN ILE GLU THR LEU LEU PHE MET VAL LEU ASP VAL SER SEQRES 5 A 69 ALA LYS VAL GLY PHE GLY LEU ILE LEU LEU ARG SER ARG SEQRES 6 A 69 ALA ILE PHE GLY HELIX 1 H1 ALA A 168 ILE A 191 1KINK AT PRO 186 24 HELIX 2 H2 ILE A 198 ARG A 225 1UNSTABLE ON ILE 198 - PRO 200 28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000