PDB Short entry for 1BOD HEADER CALCIUM-BINDING PROTEIN 23-APR-93 1BOD TITLE THE SOLUTION STRUCTURES OF MUTANT CALBINDIN D9K'S, AS DETERMINED BY TITLE 2 NMR, SHOW THAT THE CALCIUM BINDING SITE CAN ADOPT DIFFERENT FOLDS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALBINDIN D9K; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: CATTLE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 ORGAN: INTESTINE KEYWDS CALCIUM-BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 24 AUTHOR C.JOHANSSON,M.ULLNER,T.DRAKENBERG REVDAT 4 10-APR-24 1BOD 1 SEQADV REVDAT 3 01-MAY-13 1BOD 1 COMPND SEQADV VERSN REVDAT 2 24-FEB-09 1BOD 1 VERSN REVDAT 1 31-OCT-93 1BOD 0 JRNL AUTH C.JOHANSSON,M.ULLNER,T.DRAKENBERG JRNL TITL THE SOLUTION STRUCTURES OF MUTANT CALBINDIN D9K'S, AS JRNL TITL 2 DETERMINED BY NMR, SHOW THAT THE CALCIUM-BINDING SITE CAN JRNL TITL 3 ADOPT DIFFERENT FOLDS. JRNL REF BIOCHEMISTRY V. 32 8429 1993 JRNL REFN ISSN 0006-2960 JRNL PMID 8357794 JRNL DOI 10.1021/BI00084A007 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1BOD COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000171959. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 24 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 9 -77.70 169.92 REMARK 500 1 TYR A 13 0.81 -67.30 REMARK 500 1 ASP A 15 46.84 -86.17 REMARK 500 1 LYS A 16 37.72 -79.61 REMARK 500 1 THR A 34 -67.00 85.88 REMARK 500 1 PHE A 36 62.75 -117.62 REMARK 500 1 LEU A 40 35.27 -89.69 REMARK 500 1 SER A 44 72.57 51.84 REMARK 500 1 LEU A 46 -82.45 23.87 REMARK 500 1 ASP A 47 32.82 -85.06 REMARK 500 1 LEU A 49 -39.98 171.37 REMARK 500 1 ASP A 58 29.02 -150.56 REMARK 500 1 SER A 62 -166.19 -75.80 REMARK 500 1 GLN A 67 -82.55 -44.90 REMARK 500 1 ILE A 73 44.24 -83.69 REMARK 500 1 SER A 74 -157.60 178.82 REMARK 500 2 LYS A 1 108.90 74.44 REMARK 500 2 ILE A 9 -79.32 167.64 REMARK 500 2 TYR A 13 3.83 -69.68 REMARK 500 2 ASP A 15 45.72 -86.39 REMARK 500 2 LEU A 32 -70.59 -70.71 REMARK 500 2 GLU A 35 -20.06 82.54 REMARK 500 2 SER A 38 -35.50 -37.49 REMARK 500 2 MET A 43 -160.79 162.00 REMARK 500 2 LEU A 46 -98.17 6.65 REMARK 500 2 GLU A 52 -30.23 -39.14 REMARK 500 2 GLN A 67 -21.54 -37.53 REMARK 500 2 VAL A 68 -11.61 -49.25 REMARK 500 2 SER A 74 -166.15 -55.26 REMARK 500 3 LYS A 1 49.11 38.62 REMARK 500 3 ILE A 9 -56.25 -127.32 REMARK 500 3 ASP A 15 38.44 -84.33 REMARK 500 3 LYS A 16 45.63 -81.56 REMARK 500 3 ASP A 19 -43.06 -145.67 REMARK 500 3 LYS A 29 -29.83 -39.99 REMARK 500 3 GLN A 33 -83.30 -43.51 REMARK 500 3 GLU A 35 -27.94 90.63 REMARK 500 3 LEU A 40 42.99 -95.16 REMARK 500 3 MET A 43 -76.63 173.05 REMARK 500 3 LEU A 46 -90.15 60.15 REMARK 500 3 ASP A 54 18.15 45.84 REMARK 500 3 LYS A 55 -169.34 -55.46 REMARK 500 3 SER A 62 -158.55 -60.85 REMARK 500 3 PHE A 63 -75.91 -75.16 REMARK 500 3 GLN A 67 2.52 -59.71 REMARK 500 4 GLU A 4 41.95 -82.70 REMARK 500 4 GLU A 17 -72.84 -99.26 REMARK 500 4 GLN A 22 -152.31 -111.41 REMARK 500 4 GLU A 26 -39.40 -39.96 REMARK 500 4 LYS A 29 -29.48 -39.04 REMARK 500 REMARK 500 THIS ENTRY HAS 423 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: I REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: II REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL DBREF 1BOD A 1 75 UNP P02633 S100G_BOVIN 4 78 SEQADV 1BOD A UNP P02633 ALA 17 DELETION SEQADV 1BOD ASP A 15 UNP P02633 ALA 18 ENGINEERED MUTATION SEQADV 1BOD GLY A 20 UNP P02633 PRO 23 ENGINEERED MUTATION SEQADV 1BOD A UNP P02633 ASN 24 DELETION SEQADV 1BOD MET A 43 UNP P02633 PRO 46 ENGINEERED MUTATION SEQRES 1 A 74 MET LYS SER PRO GLU GLU LEU LYS GLY ILE PHE GLU LYS SEQRES 2 A 74 TYR ASP LYS GLU GLY ASP GLY GLN LEU SER LYS GLU GLU SEQRES 3 A 74 LEU LYS LEU LEU LEU GLN THR GLU PHE PRO SER LEU LEU SEQRES 4 A 74 LYS GLY MET SER THR LEU ASP GLU LEU PHE GLU GLU LEU SEQRES 5 A 74 ASP LYS ASN GLY ASP GLY GLU VAL SER PHE GLU GLU PHE SEQRES 6 A 74 GLN VAL LEU VAL LYS LYS ILE SER GLN HELIX 1 1 SER A 2 LEU A 6 5 5 HELIX 2 2 ILE A 9 ASP A 15 1 6 HELIX 3 3 SER A 24 GLN A 33 1 10 HELIX 4 4 LEU A 49 ASP A 54 1 6 HELIX 5 5 PHE A 66 ILE A 73 1 8 SITE 1 I 12 ASP A 15 LYS A 16 GLU A 17 GLY A 18 SITE 2 I 12 ASP A 19 GLY A 20 GLN A 22 LEU A 23 SITE 3 I 12 SER A 24 LYS A 25 GLU A 26 GLU A 27 SITE 1 II 12 ASP A 54 LYS A 55 ASN A 56 GLY A 57 SITE 2 II 12 ASP A 58 GLY A 59 GLU A 60 VAL A 61 SITE 3 II 12 SER A 62 PHE A 63 GLU A 64 GLU A 65 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000