PDB Short entry for 1BQ4 HEADER ISOMERASE 20-AUG-98 1BQ4 TITLE SACCHAROMYCES CEREVISIAE PHOSPHOGLYCERATE MUTASE IN COMPLEX WITH TITLE 2 BENZENE HEXACARBOXYLATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN (PHOSPHOGLYCERATE MUTASE 1); COMPND 3 CHAIN: D, C, A, B; COMPND 4 SYNONYM: PHOSPHOGLYCEROMUTASE; COMPND 5 EC: 5.4.2.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 STRAIN: S150-GPM::HIS3; SOURCE 6 CELLULAR_LOCATION: CYTOPLASM KEYWDS ISOMERASE, TRANSFERASE (PHOSPHORYL), GLYCOLYTIC ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR D.J.RIGDEN,S.E.V.PHILLIPS,L.A.FOTHERGILL-GILMORE REVDAT 5 09-AUG-23 1BQ4 1 REMARK REVDAT 4 24-FEB-09 1BQ4 1 VERSN REVDAT 3 01-APR-03 1BQ4 1 JRNL REVDAT 2 29-DEC-99 1BQ4 4 HEADER COMPND REMARK JRNL REVDAT 2 2 4 ATOM SOURCE SEQRES REVDAT 1 26-AUG-98 1BQ4 0 JRNL AUTH D.J.RIGDEN,R.A.WALTER,S.E.PHILLIPS,L.A.FOTHERGILL-GILMORE JRNL TITL POLYANIONIC INHIBITORS OF PHOSPHOGLYCERATE MUTASE: COMBINED JRNL TITL 2 STRUCTURAL AND BIOCHEMICAL ANALYSIS. JRNL REF J.MOL.BIOL. V. 289 691 1999 JRNL REFN ISSN 0022-2836 JRNL PMID 10369755 JRNL DOI 10.1006/JMBI.1999.2848 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.J.RIGDEN,S.E.V.PHILLIPS,L.A.FOTHERGILL-GILMORE REMARK 1 TITL SULPHATE IONS OBSERVED IN THE 2.12 A STRUCTURE OF A NEW REMARK 1 TITL 2 CRYSTAL FORM OF S. CEREVISIAE PHOSPHOGLYCERATE MUTASE REMARK 1 TITL 3 PROVIDE INSIGHTS INTO UNDERSTANDING THE CATALYTIC MECHANISM REMARK 1 REF J.MOL.BIOL. V. 286 1507 1999 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.J.RIGDEN,D.ALEXEEV,S.E.V.PHILLIPS,L.A.FOTHERGILL-GILMORE REMARK 1 TITL THE 2.3 ANGSTROMS X-RAY STRUCTURE OF S.CEREVISIAE REMARK 1 TITL 2 PHOSPHOGLYCERATE MUTASE REMARK 1 REF J.MOL.BIOL. V. 276 449 1998 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 100000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0010 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 63.0 REMARK 3 NUMBER OF REFLECTIONS : 49347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2444 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.61 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 47.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 4008 REMARK 3 BIN R VALUE (WORKING SET) : 0.3300 REMARK 3 BIN FREE R VALUE : 0.4190 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 188 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7482 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : 30.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.016 REMARK 3 BOND ANGLES (DEGREES) : 2.000 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 25.30 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.800 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : CONSTRAINTS REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : PARAM11.WAT REMARK 3 PARAMETER FILE 3 : PARAM.SO4 REMARK 3 PARAMETER FILE 4 : BHC.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : TOPH11.WAT REMARK 3 TOPOLOGY FILE 3 : TOP.SO4 REMARK 3 TOPOLOGY FILE 4 : BHC.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 C-TERMINAL RESIDUES A 235 - A 246, B 236 - B 246, C 236 - C REMARK 3 246 AND D 235 - D 246 ARE NOT VISIBLE IN ELECTRON DENSITY REMARK 3 MAP. CLEAVAGE OF SOME OR ALL OF THESE RESIDUES MAY HAVE REMARK 3 OCCURRED. REMARK 4 REMARK 4 1BQ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000008024. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.65 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49354 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 63.0 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 47.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.30 REMARK 200 R MERGE FOR SHELL (I) : 0.25400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 5PGM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLISED FROM 22-24% REMARK 280 PEG 4000 60MM TRIS-HCL, PH 8.65 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 46.26000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, C, A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA D 235 REMARK 465 GLY D 236 REMARK 465 ALA D 237 REMARK 465 ALA D 238 REMARK 465 ALA D 239 REMARK 465 VAL D 240 REMARK 465 ALA D 241 REMARK 465 ASN D 242 REMARK 465 GLN D 243 REMARK 465 GLY D 244 REMARK 465 LYS D 245 REMARK 465 LYS D 246 REMARK 465 GLY C 236 REMARK 465 ALA C 237 REMARK 465 ALA C 238 REMARK 465 ALA C 239 REMARK 465 VAL C 240 REMARK 465 ALA C 241 REMARK 465 ASN C 242 REMARK 465 GLN C 243 REMARK 465 GLY C 244 REMARK 465 LYS C 245 REMARK 465 LYS C 246 REMARK 465 ALA A 235 REMARK 465 GLY A 236 REMARK 465 ALA A 237 REMARK 465 ALA A 238 REMARK 465 ALA A 239 REMARK 465 VAL A 240 REMARK 465 ALA A 241 REMARK 465 ASN A 242 REMARK 465 GLN A 243 REMARK 465 GLY A 244 REMARK 465 LYS A 245 REMARK 465 LYS A 246 REMARK 465 GLY B 236 REMARK 465 ALA B 237 REMARK 465 ALA B 238 REMARK 465 ALA B 239 REMARK 465 VAL B 240 REMARK 465 ALA B 241 REMARK 465 ASN B 242 REMARK 465 GLN B 243 REMARK 465 GLY B 244 REMARK 465 LYS B 245 REMARK 465 LYS B 246 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG C 59 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 PRO C 210 C - N - CA ANGL. DEV. = 11.9 DEGREES REMARK 500 PRO A 146 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 PRO A 210 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 PRO B 49 C - N - CA ANGL. DEV. = 11.0 DEGREES REMARK 500 ARG B 59 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 59 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ASP B 141 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 PRO B 230 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER D 55 -161.15 -77.22 REMARK 500 ASP D 72 3.52 84.40 REMARK 500 ASN D 85 170.46 -59.08 REMARK 500 ASP D 91 24.43 -74.44 REMARK 500 ARG D 136 2.59 -67.55 REMARK 500 THR D 148 177.42 170.52 REMARK 500 ALA D 180 -110.67 -115.02 REMARK 500 LEU D 228 10.27 -69.57 REMARK 500 ASP D 229 81.33 -159.58 REMARK 500 PRO D 230 0.97 -68.21 REMARK 500 ASN C 17 48.78 70.06 REMARK 500 SER C 55 -163.77 -115.38 REMARK 500 ARG C 73 41.24 -102.85 REMARK 500 TRP C 75 -19.17 -46.28 REMARK 500 THR C 111 -70.02 -61.54 REMARK 500 THR C 148 151.43 177.97 REMARK 500 ALA C 180 -142.57 -150.70 REMARK 500 GLU C 217 -33.44 -37.69 REMARK 500 LEU C 219 17.06 53.15 REMARK 500 ASP C 229 72.45 -154.93 REMARK 500 GLN A 10 154.21 -46.90 REMARK 500 THR A 54 -162.04 -115.57 REMARK 500 SER A 55 -166.08 -110.12 REMARK 500 ARG A 73 34.19 -99.94 REMARK 500 ASN A 85 162.98 -46.47 REMARK 500 LEU A 92 -4.82 -55.33 REMARK 500 PRO A 120 178.55 -59.04 REMARK 500 SER A 126 48.05 -100.90 REMARK 500 THR A 148 174.02 176.12 REMARK 500 VAL A 165 -63.13 -97.99 REMARK 500 ALA A 180 -137.97 -145.65 REMARK 500 GLU A 217 1.98 -65.14 REMARK 500 ASP A 229 78.43 -177.93 REMARK 500 HIS B 8 172.24 -57.83 REMARK 500 THR B 20 -67.54 -97.53 REMARK 500 ASP B 24 76.84 -69.85 REMARK 500 PRO B 49 108.77 -59.47 REMARK 500 ARG B 73 44.46 -108.73 REMARK 500 ASN B 85 158.24 -48.90 REMARK 500 GLU B 106 -36.06 -20.53 REMARK 500 LYS B 132 108.07 -59.85 REMARK 500 ASP B 141 108.54 -50.65 REMARK 500 ALA B 180 -144.25 -137.27 REMARK 500 PRO B 221 143.58 -36.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR A 226 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 HETEROGEN: BHC REMARK 600 MODELLED AS SEMI-IONIZED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CAA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REMARK 800 REQUIRED TO PRIME THE ENZYME. REMARK 800 REMARK 800 SITE_IDENTIFIER: CAB REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REMARK 800 REQUIRED TO PRIME THE ENZYME. REMARK 800 REMARK 800 SITE_IDENTIFIER: CAC REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REMARK 800 REQUIRED TO PRIME THE ENZYME. REMARK 800 REMARK 800 SITE_IDENTIFIER: CAD REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: CATALYTIC SITE. HIS 8 PHOSPHORYLATION IS REMARK 800 REQUIRED TO PRIME THE ENZYME. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BHC A 302 DBREF 1BQ4 D 1 246 UNP P00950 PMG1_YEAST 2 247 DBREF 1BQ4 C 1 246 UNP P00950 PMG1_YEAST 2 247 DBREF 1BQ4 A 1 246 UNP P00950 PMG1_YEAST 2 247 DBREF 1BQ4 B 1 246 UNP P00950 PMG1_YEAST 2 247 SEQRES 1 D 246 PRO LYS LEU VAL LEU VAL ARG HIS GLY GLN SER GLU TRP SEQRES 2 D 246 ASN GLU LYS ASN LEU PHE THR GLY TRP VAL ASP VAL LYS SEQRES 3 D 246 LEU SER ALA LYS GLY GLN GLN GLU ALA ALA ARG ALA GLY SEQRES 4 D 246 GLU LEU LEU LYS GLU LYS LYS VAL TYR PRO ASP VAL LEU SEQRES 5 D 246 TYR THR SER LYS LEU SER ARG ALA ILE GLN THR ALA ASN SEQRES 6 D 246 ILE ALA LEU GLU LYS ALA ASP ARG LEU TRP ILE PRO VAL SEQRES 7 D 246 ASN ARG SER TRP ARG LEU ASN GLU ARG HIS TYR GLY ASP SEQRES 8 D 246 LEU GLN GLY LYS ASP LYS ALA GLU THR LEU LYS LYS PHE SEQRES 9 D 246 GLY GLU GLU LYS PHE ASN THR TYR ARG ARG SER PHE ASP SEQRES 10 D 246 VAL PRO PRO PRO PRO ILE ASP ALA SER SER PRO PHE SER SEQRES 11 D 246 GLN LYS GLY ASP GLU ARG TYR LYS TYR VAL ASP PRO ASN SEQRES 12 D 246 VAL LEU PRO GLU THR GLU SER LEU ALA LEU VAL ILE ASP SEQRES 13 D 246 ARG LEU LEU PRO TYR TRP GLN ASP VAL ILE ALA LYS ASP SEQRES 14 D 246 LEU LEU SER GLY LYS THR VAL MET ILE ALA ALA HIS GLY SEQRES 15 D 246 ASN SER LEU ARG GLY LEU VAL LYS HIS LEU GLU GLY ILE SEQRES 16 D 246 SER ASP ALA ASP ILE ALA LYS LEU ASN ILE PRO THR GLY SEQRES 17 D 246 ILE PRO LEU VAL PHE GLU LEU ASP GLU ASN LEU LYS PRO SEQRES 18 D 246 SER LYS PRO SER TYR TYR LEU ASP PRO GLU ALA ALA ALA SEQRES 19 D 246 ALA GLY ALA ALA ALA VAL ALA ASN GLN GLY LYS LYS SEQRES 1 C 246 PRO LYS LEU VAL LEU VAL ARG HIS GLY GLN SER GLU TRP SEQRES 2 C 246 ASN GLU LYS ASN LEU PHE THR GLY TRP VAL ASP VAL LYS SEQRES 3 C 246 LEU SER ALA LYS GLY GLN GLN GLU ALA ALA ARG ALA GLY SEQRES 4 C 246 GLU LEU LEU LYS GLU LYS LYS VAL TYR PRO ASP VAL LEU SEQRES 5 C 246 TYR THR SER LYS LEU SER ARG ALA ILE GLN THR ALA ASN SEQRES 6 C 246 ILE ALA LEU GLU LYS ALA ASP ARG LEU TRP ILE PRO VAL SEQRES 7 C 246 ASN ARG SER TRP ARG LEU ASN GLU ARG HIS TYR GLY ASP SEQRES 8 C 246 LEU GLN GLY LYS ASP LYS ALA GLU THR LEU LYS LYS PHE SEQRES 9 C 246 GLY GLU GLU LYS PHE ASN THR TYR ARG ARG SER PHE ASP SEQRES 10 C 246 VAL PRO PRO PRO PRO ILE ASP ALA SER SER PRO PHE SER SEQRES 11 C 246 GLN LYS GLY ASP GLU ARG TYR LYS TYR VAL ASP PRO ASN SEQRES 12 C 246 VAL LEU PRO GLU THR GLU SER LEU ALA LEU VAL ILE ASP SEQRES 13 C 246 ARG LEU LEU PRO TYR TRP GLN ASP VAL ILE ALA LYS ASP SEQRES 14 C 246 LEU LEU SER GLY LYS THR VAL MET ILE ALA ALA HIS GLY SEQRES 15 C 246 ASN SER LEU ARG GLY LEU VAL LYS HIS LEU GLU GLY ILE SEQRES 16 C 246 SER ASP ALA ASP ILE ALA LYS LEU ASN ILE PRO THR GLY SEQRES 17 C 246 ILE PRO LEU VAL PHE GLU LEU ASP GLU ASN LEU LYS PRO SEQRES 18 C 246 SER LYS PRO SER TYR TYR LEU ASP PRO GLU ALA ALA ALA SEQRES 19 C 246 ALA GLY ALA ALA ALA VAL ALA ASN GLN GLY LYS LYS SEQRES 1 A 246 PRO LYS LEU VAL LEU VAL ARG HIS GLY GLN SER GLU TRP SEQRES 2 A 246 ASN GLU LYS ASN LEU PHE THR GLY TRP VAL ASP VAL LYS SEQRES 3 A 246 LEU SER ALA LYS GLY GLN GLN GLU ALA ALA ARG ALA GLY SEQRES 4 A 246 GLU LEU LEU LYS GLU LYS LYS VAL TYR PRO ASP VAL LEU SEQRES 5 A 246 TYR THR SER LYS LEU SER ARG ALA ILE GLN THR ALA ASN SEQRES 6 A 246 ILE ALA LEU GLU LYS ALA ASP ARG LEU TRP ILE PRO VAL SEQRES 7 A 246 ASN ARG SER TRP ARG LEU ASN GLU ARG HIS TYR GLY ASP SEQRES 8 A 246 LEU GLN GLY LYS ASP LYS ALA GLU THR LEU LYS LYS PHE SEQRES 9 A 246 GLY GLU GLU LYS PHE ASN THR TYR ARG ARG SER PHE ASP SEQRES 10 A 246 VAL PRO PRO PRO PRO ILE ASP ALA SER SER PRO PHE SER SEQRES 11 A 246 GLN LYS GLY ASP GLU ARG TYR LYS TYR VAL ASP PRO ASN SEQRES 12 A 246 VAL LEU PRO GLU THR GLU SER LEU ALA LEU VAL ILE ASP SEQRES 13 A 246 ARG LEU LEU PRO TYR TRP GLN ASP VAL ILE ALA LYS ASP SEQRES 14 A 246 LEU LEU SER GLY LYS THR VAL MET ILE ALA ALA HIS GLY SEQRES 15 A 246 ASN SER LEU ARG GLY LEU VAL LYS HIS LEU GLU GLY ILE SEQRES 16 A 246 SER ASP ALA ASP ILE ALA LYS LEU ASN ILE PRO THR GLY SEQRES 17 A 246 ILE PRO LEU VAL PHE GLU LEU ASP GLU ASN LEU LYS PRO SEQRES 18 A 246 SER LYS PRO SER TYR TYR LEU ASP PRO GLU ALA ALA ALA SEQRES 19 A 246 ALA GLY ALA ALA ALA VAL ALA ASN GLN GLY LYS LYS SEQRES 1 B 246 PRO LYS LEU VAL LEU VAL ARG HIS GLY GLN SER GLU TRP SEQRES 2 B 246 ASN GLU LYS ASN LEU PHE THR GLY TRP VAL ASP VAL LYS SEQRES 3 B 246 LEU SER ALA LYS GLY GLN GLN GLU ALA ALA ARG ALA GLY SEQRES 4 B 246 GLU LEU LEU LYS GLU LYS LYS VAL TYR PRO ASP VAL LEU SEQRES 5 B 246 TYR THR SER LYS LEU SER ARG ALA ILE GLN THR ALA ASN SEQRES 6 B 246 ILE ALA LEU GLU LYS ALA ASP ARG LEU TRP ILE PRO VAL SEQRES 7 B 246 ASN ARG SER TRP ARG LEU ASN GLU ARG HIS TYR GLY ASP SEQRES 8 B 246 LEU GLN GLY LYS ASP LYS ALA GLU THR LEU LYS LYS PHE SEQRES 9 B 246 GLY GLU GLU LYS PHE ASN THR TYR ARG ARG SER PHE ASP SEQRES 10 B 246 VAL PRO PRO PRO PRO ILE ASP ALA SER SER PRO PHE SER SEQRES 11 B 246 GLN LYS GLY ASP GLU ARG TYR LYS TYR VAL ASP PRO ASN SEQRES 12 B 246 VAL LEU PRO GLU THR GLU SER LEU ALA LEU VAL ILE ASP SEQRES 13 B 246 ARG LEU LEU PRO TYR TRP GLN ASP VAL ILE ALA LYS ASP SEQRES 14 B 246 LEU LEU SER GLY LYS THR VAL MET ILE ALA ALA HIS GLY SEQRES 15 B 246 ASN SER LEU ARG GLY LEU VAL LYS HIS LEU GLU GLY ILE SEQRES 16 B 246 SER ASP ALA ASP ILE ALA LYS LEU ASN ILE PRO THR GLY SEQRES 17 B 246 ILE PRO LEU VAL PHE GLU LEU ASP GLU ASN LEU LYS PRO SEQRES 18 B 246 SER LYS PRO SER TYR TYR LEU ASP PRO GLU ALA ALA ALA SEQRES 19 B 246 ALA GLY ALA ALA ALA VAL ALA ASN GLN GLY LYS LYS HET SO4 D 300 5 HET SO4 C 301 5 HET BHC A 302 24 HET SO4 B 303 5 HETNAM SO4 SULFATE ION HETNAM BHC BENZENE HEXACARBOXYLIC ACID FORMUL 5 SO4 3(O4 S 2-) FORMUL 7 BHC C12 H6 O12 HELIX 1 1 GLU D 12 ASN D 14 5 3 HELIX 2 2 ALA D 29 GLU D 44 1 16 HELIX 3 3 SER D 58 ALA D 71 1 14 HELIX 4 4 TRP D 82 LEU D 84 5 3 HELIX 5 5 GLY D 90 LEU D 92 5 3 HELIX 6 6 LYS D 97 PHE D 104 1 8 HELIX 7 7 GLU D 106 ARG D 114 1 9 HELIX 8 8 GLU D 135 TYR D 137 5 3 HELIX 9 9 PRO D 142 VAL D 144 5 3 HELIX 10 10 LEU D 151 ASP D 164 1 14 HELIX 11 11 ILE D 166 SER D 172 1 7 HELIX 12 12 GLY D 182 GLU D 193 1 12 HELIX 13 13 ILE D 200 LYS D 202 5 3 HELIX 14 14 GLU C 12 GLU C 15 1 4 HELIX 15 15 ALA C 29 GLU C 44 1 16 HELIX 16 16 SER C 58 ALA C 71 1 14 HELIX 17 17 TRP C 82 LEU C 84 5 3 HELIX 18 18 GLY C 90 LEU C 92 5 3 HELIX 19 19 LYS C 97 LYS C 102 1 6 HELIX 20 20 GLU C 106 ARG C 114 1 9 HELIX 21 21 GLU C 135 TYR C 137 5 3 HELIX 22 22 LEU C 151 ASP C 164 1 14 HELIX 23 23 ILE C 166 SER C 172 1 7 HELIX 24 24 GLY C 182 LEU C 192 1 11 HELIX 25 25 ASP C 197 LYS C 202 1 6 HELIX 26 26 PRO C 230 ALA C 233 1 4 HELIX 27 27 ALA A 29 GLU A 44 1 16 HELIX 28 28 SER A 58 LYS A 70 1 13 HELIX 29 29 TRP A 82 LEU A 84 5 3 HELIX 30 30 GLY A 90 LEU A 92 5 3 HELIX 31 31 LYS A 97 ARG A 114 1 18 HELIX 32 32 GLU A 135 TYR A 137 5 3 HELIX 33 33 PRO A 142 VAL A 144 5 3 HELIX 34 34 LEU A 151 ASP A 164 1 14 HELIX 35 35 ILE A 166 SER A 172 1 7 HELIX 36 36 GLY A 182 GLU A 193 1 12 HELIX 37 37 GLU B 12 ASN B 14 5 3 HELIX 38 38 ALA B 29 GLU B 44 1 16 HELIX 39 39 SER B 58 ALA B 71 1 14 HELIX 40 40 TRP B 82 LEU B 84 5 3 HELIX 41 41 GLY B 90 LEU B 92 5 3 HELIX 42 42 LYS B 97 ARG B 114 1 18 HELIX 43 43 GLU B 135 TYR B 137 5 3 HELIX 44 44 PRO B 142 VAL B 144 5 3 HELIX 45 45 LEU B 151 ASP B 164 1 14 HELIX 46 46 ILE B 166 LEU B 171 1 6 HELIX 47 47 GLY B 182 GLU B 193 1 12 HELIX 48 48 ILE B 200 LYS B 202 5 3 HELIX 49 49 PRO B 230 ALA B 233 1 4 SHEET 1 A 5 PRO D 210 GLU D 214 0 SHEET 2 A 5 LYS D 2 VAL D 6 -1 N LEU D 5 O LEU D 211 SHEET 3 A 5 THR D 175 ALA D 179 1 N VAL D 176 O LYS D 2 SHEET 4 A 5 VAL D 51 THR D 54 1 N VAL D 51 O MET D 177 SHEET 5 A 5 PRO D 77 ARG D 80 1 N PRO D 77 O LEU D 52 SHEET 1 B 5 PRO C 210 GLU C 214 0 SHEET 2 B 5 LYS C 2 ARG C 7 -1 N LEU C 5 O LEU C 211 SHEET 3 B 5 THR C 175 ALA C 180 1 N VAL C 176 O LYS C 2 SHEET 4 B 5 VAL C 51 THR C 54 1 N VAL C 51 O MET C 177 SHEET 5 B 5 PRO C 77 ARG C 80 1 N PRO C 77 O LEU C 52 SHEET 1 C 5 PRO A 210 GLU A 214 0 SHEET 2 C 5 LYS A 2 ARG A 7 -1 N LEU A 5 O LEU A 211 SHEET 3 C 5 THR A 175 ALA A 180 1 N VAL A 176 O LYS A 2 SHEET 4 C 5 VAL A 51 THR A 54 1 N VAL A 51 O MET A 177 SHEET 5 C 5 PRO A 77 ARG A 80 1 N PRO A 77 O LEU A 52 SHEET 1 D 5 LEU B 211 GLU B 214 0 SHEET 2 D 5 LYS B 2 ARG B 7 -1 N LEU B 5 O LEU B 211 SHEET 3 D 5 THR B 175 ALA B 180 1 N VAL B 176 O LYS B 2 SHEET 4 D 5 VAL B 51 THR B 54 1 N VAL B 51 O MET B 177 SHEET 5 D 5 PRO B 77 ARG B 80 1 N PRO B 77 O LEU B 52 SITE 1 CAA 4 HIS A 8 HIS A 181 ARG A 7 GLU A 86 SITE 1 CAB 4 HIS B 8 HIS B 181 ARG B 7 GLU B 86 SITE 1 CAC 4 HIS C 8 HIS C 181 ARG C 7 GLU C 86 SITE 1 CAD 4 HIS D 8 HIS D 181 ARG D 7 GLU D 86 SITE 1 AC1 5 HIS D 8 SER D 11 ASN D 14 THR D 20 SITE 2 AC1 5 ARG D 59 SITE 1 AC2 4 SER C 11 ASN C 14 THR C 20 ARG C 59 SITE 1 AC3 5 HIS B 8 SER B 11 ASN B 14 THR B 20 SITE 2 AC3 5 ARG B 59 SITE 1 AC4 8 ARG A 7 ASN A 14 TYR A 89 LYS A 97 SITE 2 AC4 8 ARG A 113 ARG A 114 ASN A 183 ASN A 204 CRYST1 82.510 92.520 148.050 90.00 90.00 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012120 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006754 0.00000 MTRIX1 1 1.000000 0.000680 -0.000050 0.00215 1 MTRIX2 1 0.000680 -1.000000 -0.000450 45.06806 1 MTRIX3 1 -0.000050 0.000450 -1.000000 74.02833 1