PDB Short entry for 1C8M HEADER VIRUS 26-MAY-00 1C8M TITLE REFINED CRYSTAL STRUCTURE OF HUMAN RHINOVIRUS 16 COMPLEXED WITH TITLE 2 VP63843 (PLECONARIL), AN ANTI-PICORNAVIRAL DRUG CURRENTLY IN CLINICAL TITLE 3 TRIALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HUMAN RHINOVIRUS 16 COAT PROTEIN; COMPND 3 CHAIN: 1; COMPND 4 FRAGMENT: RESIDUES 569-853; COMPND 5 SYNONYM: HRV16; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HUMAN RHINOVIRUS 16 COAT PROTEIN; COMPND 8 CHAIN: 2; COMPND 9 FRAGMENT: RESIDUES 79-330; COMPND 10 SYNONYM: HRV16; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HUMAN RHINOVIRUS 16 COAT PROTEIN; COMPND 13 CHAIN: 3; COMPND 14 FRAGMENT: RESIDUES 331-568; COMPND 15 SYNONYM: HRV16; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: HUMAN RHINOVIRUS 16 COAT PROTEIN; COMPND 18 CHAIN: 4; COMPND 19 FRAGMENT: RESIDUES 2-78; COMPND 20 SYNONYM: HRV16 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 16; SOURCE 3 ORGANISM_TAXID: 31708; SOURCE 4 STRAIN: SEROTYPE 16; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 16; SOURCE 7 ORGANISM_TAXID: 31708; SOURCE 8 STRAIN: SEROTYPE 16; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 16; SOURCE 11 ORGANISM_TAXID: 31708; SOURCE 12 STRAIN: SEROTYPE 16; SOURCE 13 MOL_ID: 4; SOURCE 14 ORGANISM_SCIENTIFIC: HUMAN RHINOVIRUS 16; SOURCE 15 ORGANISM_TAXID: 31708; SOURCE 16 STRAIN: SEROTYPE 16 KEYWDS RHINOVIRUS COAT PROTEIN, HUMAN RHINOVIRUS 16, ANTIVIRAL COMPOUND, KEYWDS 2 DRUG, WIN COMPOUND, ICOSAHEDRAL VIRUS, VIRUS EXPDTA X-RAY DIFFRACTION AUTHOR S.CHAKRAVARTY,C.M.BATOR,D.C.PEVEAR,G.D.DIANA,M.G.ROSSMANN REVDAT 6 20-SEP-23 1C8M 1 REMARK REVDAT 5 15-MAR-23 1C8M 1 REMARK REVDAT 4 08-FEB-23 1C8M 1 REMARK SEQADV CRYST1 MTRIX REVDAT 4 2 1 ATOM REVDAT 3 04-OCT-17 1C8M 1 REMARK REVDAT 2 24-FEB-09 1C8M 1 VERSN REVDAT 1 22-NOV-00 1C8M 0 JRNL AUTH S.CHAKRAVARTY,C.M.BATOR,D.C.PEVEAR,G.D.DIANA,M.G.ROSSMANN JRNL TITL THE REFINED STRUCTURE OF A PICORNAVIRUS INHIBITOR CURRENTLY JRNL TITL 2 IN CLINICAL TRIALS, WHEN COMPLEXED WITH HUMAN RHINOVIRUS 16 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.T.HADFIELD,I.MINOR,G.D.DIANA,M.G.ROSSMANN REMARK 1 TITL ANALYSIS OF THREE STRUCTURALLY RELATED ANTIVIRAL COMPOUNDS REMARK 1 TITL 2 IN COMPLEX WITH HUMAN RHINOVIRUS 16 REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 96 14730 1999 REMARK 1 REFN ISSN 0027-8424 REMARK 1 DOI 10.1073/PNAS.96.26.14730 REMARK 1 REFERENCE 2 REMARK 1 AUTH A.T.HADFIELD,W.M.LEE,R.ZHAO,M.A.OLIVEIRA,I.MINOR, REMARK 1 AUTH 2 R.R.RUECKERT,M.G.ROSSMANN REMARK 1 TITL THE REFINED STRUCTURE OF HUMAN RHINOVIRUS 16 AT 2.15 A REMARK 1 TITL 2 RESOLUTION: IMPLICATIONS FOR THE VIRAL LIFE CYCLE REMARK 1 REF STRUCTURE V. 5 427 1997 REMARK 1 REFN ISSN 0969-2126 REMARK 1 DOI 10.1016/S0969-2126(97)00199-8 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.A.OLIVEIRA,R.ZHAO,W.M.LEE,M.J.KREMER,I.MINOR,R.R.RUECKERT, REMARK 1 AUTH 2 G.D.DIANA,D.C.PEVEAR,F.J.DUTKO,M.A.MCKINLAY,M.G.ROSSMANN REMARK 1 TITL THE STRUCTURE OF HUMAN RHINOVIRUS 16 REMARK 1 REF STRUCTURE V. 1 51 1993 REMARK 1 REFN ISSN 0969-2126 REMARK 1 REFERENCE 4 REMARK 1 AUTH N.H.OLSON,P.R.KOLATKAR,M.A.OLIVEIRA,R.H.CHENG,J.M.GREVE, REMARK 1 AUTH 2 A.MCCLELLAND,T.S.BAKER,M.G.ROSSMANN REMARK 1 TITL STRUCTURE OF A HUMAN RHINOVIRUS COMPLEXED WITH ITS RECEPTOR REMARK 1 TITL 2 MOLECULE REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 90 507 1993 REMARK 1 REFN ISSN 0027-8424 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.H.KIM,P.WILLINGMANN,Z.X.GONG,M.J.KREMER,M.S.CHAPMAN, REMARK 1 AUTH 2 I.MINOR,M.A.OLIVEIRA,M.G.ROSSMANN,K.ANDRIES,G.D.DIANA, REMARK 1 AUTH 3 F.J.DUTKO,M.A.MCKINLAY,D.C.PEVEAR REMARK 1 TITL A COMPARISON OF THE ANTI-RHINOVIRAL DRUG BINDING POCKET IN REMARK 1 TITL 2 HRV14 AND HRV1A REMARK 1 REF J.MOL.BIOL. V. 230 206 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1006/JMBI.1993.1137 REMARK 1 REFERENCE 6 REMARK 1 AUTH S.S.KIM,T.J.SMITH,M.S.CHAPMAN,M.G.ROSSMANN,D.C.PEVEAR, REMARK 1 AUTH 2 F.J.DUTKO,P.J.FELOCK,G.D.DIANA,M.A.MCKINLAY REMARK 1 TITL CRYSTAL STRUCTURE OF HUMAN RHINOVIRUS SEROTYPE 1A (HRV1A) REMARK 1 REF J.MOL.BIOL. V. 210 91 1989 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 7 REMARK 1 AUTH T.J.SMITH,M.J.KREMER,M.LUO,G.VRIEND,E.ARNOLD,G.KAMER, REMARK 1 AUTH 2 M.G.ROSSMANN,M.A.MCKINLAY,G.D.DIANA,M.J.OTTO REMARK 1 TITL THE SITE OF ATTACHMENT IN HUMAN RHINOVIRUS 14 FOR ANTIVIRAL REMARK 1 TITL 2 AGENTS THAT INHIBIT UNCOATING REMARK 1 REF SCIENCE V. 233 1286 1986 REMARK 1 REFN ISSN 0036-8075 REMARK 1 REFERENCE 8 REMARK 1 AUTH M.G.ROSSMANN,E.ARNOLD,J.W.ERICKSON,E.A.FRANKENBERGER, REMARK 1 AUTH 2 J.P.GRIFFITH,H.J.HECHT,J.E.JOHNSON,G.KAMER,M.LUO,A.G.MOSSER, REMARK 1 AUTH 3 R.R.RUECKERT,B.SHERRY,G.VRIEND REMARK 1 TITL STRUCTURE OF A HUMAN COMMON COLD VIRUS AND FUNCTIONAL REMARK 1 TITL 2 RELATIONSHIP TO OTHER PICORNAVIRUSES REMARK 1 REF NATURE V. 317 145 1985 REMARK 1 REFN ISSN 0028-0836 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1000000.000 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0100 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.6 REMARK 3 NUMBER OF REFLECTIONS : 731062 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 70099 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.93 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 43065 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE : 0.3100 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 4743 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.006 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6310 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 482 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.012 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : 30-FOLD, STRICT REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PARHCSDX.PRO REMARK 3 PARAMETER FILE 2 : WINPAR.AH REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : TOPHCSDX.PRO REMARK 3 TOPOLOGY FILE 2 : HRV16TOP.AH REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED BOTH OBSERVED STRUCTURE FACTORS REMARK 3 AND DENSITY AVERAGED PHASES IN REFINEMENT TARGET FUNCTION REMARK 4 REMARK 4 1C8M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-00. REMARK 100 THE DEPOSITION ID IS D_1000001471. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-NOV-97; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : CHESS; APS REMARK 200 BEAMLINE : F1; 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.923; 1.0375 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SNP REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 968275 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.560 REMARK 200 RESOLUTION RANGE LOW (A) : 70.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 200 DATA REDUNDANCY : 4.290 REMARK 200 R MERGE (I) : 0.14500 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.56 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.21800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 9.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SNB, CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 1AYM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, HEPES BUFFER, SODIUM REMARK 280 CHLORIDE, CALCIUM CHLORIDE, PH 7.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 171.66500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 166.31500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 171.66500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 166.31500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.255443 0.827496 45.04505 REMARK 350 BIOMT2 2 0.361268 0.806878 -0.467368 -32.54663 REMARK 350 BIOMT3 2 -0.787074 0.532632 0.311156 70.90759 REMARK 350 BIOMT1 3 -0.309017 0.774583 0.551842 117.92947 REMARK 350 BIOMT2 3 0.839986 0.494401 -0.223586 -75.67446 REMARK 350 BIOMT3 3 -0.446017 0.394447 -0.803418 40.18174 REMARK 350 BIOMT1 4 -0.309017 0.839986 -0.446017 117.92947 REMARK 350 BIOMT2 4 0.774583 0.494401 0.394447 -69.78228 REMARK 350 BIOMT3 4 0.551842 -0.223586 -0.803418 -49.71547 REMARK 350 BIOMT1 5 0.500000 0.361268 -0.787074 45.04505 REMARK 350 BIOMT2 5 0.255443 0.806878 0.532632 -23.01290 REMARK 350 BIOMT3 5 0.827496 -0.467368 0.311156 -74.54915 REMARK 350 BIOMT1 6 -0.809017 0.519140 -0.275654 162.97452 REMARK 350 BIOMT2 6 0.519140 0.411154 -0.749297 -46.76939 REMARK 350 BIOMT3 6 -0.275654 -0.749297 -0.602137 24.83368 REMARK 350 BIOMT1 7 0.000000 0.065403 -0.997859 90.09010 REMARK 350 BIOMT2 7 0.997859 0.065263 0.004278 -89.89721 REMARK 350 BIOMT3 7 0.065403 -0.995722 -0.065263 -5.89217 REMARK 350 BIOMT1 8 0.809017 -0.478719 -0.341057 17.20568 REMARK 350 BIOMT2 8 0.519140 0.309834 0.796553 -46.76939 REMARK 350 BIOMT3 8 -0.275654 -0.821481 0.499183 24.83368 REMARK 350 BIOMT1 9 0.500000 -0.361268 0.787074 45.04505 REMARK 350 BIOMT2 9 -0.255443 0.806878 0.532632 23.01290 REMARK 350 BIOMT3 9 -0.827496 -0.467368 0.311156 74.54915 REMARK 350 BIOMT1 10 -0.500000 0.255443 0.827496 135.13515 REMARK 350 BIOMT2 10 -0.255443 0.869498 -0.422756 23.01290 REMARK 350 BIOMT3 10 -0.827496 -0.422756 -0.369498 74.54915 REMARK 350 BIOMT1 11 -0.500000 0.255443 0.827496 135.13515 REMARK 350 BIOMT2 11 0.255443 -0.869498 0.422756 -23.01290 REMARK 350 BIOMT3 11 0.827496 0.422756 0.369498 -74.54915 REMARK 350 BIOMT1 12 -0.809017 0.519140 -0.275654 162.97452 REMARK 350 BIOMT2 12 -0.519140 -0.411154 0.749297 46.76939 REMARK 350 BIOMT3 12 0.275654 0.749297 0.602137 -24.83368 REMARK 350 BIOMT1 13 0.000000 0.065403 -0.997859 90.09010 REMARK 350 BIOMT2 13 -0.997859 -0.065263 -0.004278 89.89721 REMARK 350 BIOMT3 13 -0.065403 0.995722 0.065263 5.89217 REMARK 350 BIOMT1 14 0.809017 -0.478719 -0.341057 17.20568 REMARK 350 BIOMT2 14 -0.519140 -0.309834 -0.796553 46.76939 REMARK 350 BIOMT3 14 0.275654 0.821481 -0.499183 -24.83368 REMARK 350 BIOMT1 15 0.500000 -0.361268 0.787074 45.04505 REMARK 350 BIOMT2 15 0.255443 -0.806878 -0.532632 -23.01290 REMARK 350 BIOMT3 15 0.827496 0.467368 -0.311156 -74.54915 REMARK 350 BIOMT1 16 0.309017 -0.774583 -0.551842 62.25073 REMARK 350 BIOMT2 16 -0.774583 -0.541657 0.326541 69.78228 REMARK 350 BIOMT3 16 -0.551842 0.326541 -0.767360 49.71547 REMARK 350 BIOMT1 17 0.309017 -0.839986 0.446017 62.25073 REMARK 350 BIOMT2 17 -0.839986 -0.460987 -0.286206 75.67446 REMARK 350 BIOMT3 17 0.446017 -0.286206 -0.848030 -40.18174 REMARK 350 BIOMT1 18 -0.500000 -0.361268 0.787074 135.13515 REMARK 350 BIOMT2 18 -0.361268 -0.738971 -0.568689 32.54663 REMARK 350 BIOMT3 18 0.787074 -0.568689 0.238971 -70.90759 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 180.18020 REMARK 350 BIOMT2 19 0.000000 -0.991445 -0.130526 0.00000 REMARK 350 BIOMT3 19 0.000000 -0.130526 0.991445 0.00000 REMARK 350 BIOMT1 20 -0.500000 -0.255443 -0.827496 135.13515 REMARK 350 BIOMT2 20 -0.255443 -0.869498 0.422756 23.01290 REMARK 350 BIOMT3 20 -0.827496 0.422756 0.369498 74.54915 REMARK 350 BIOMT1 21 -0.500000 -0.361268 0.787074 135.13515 REMARK 350 BIOMT2 21 0.361268 0.738971 0.568689 -32.54663 REMARK 350 BIOMT3 21 -0.787074 0.568689 -0.238971 70.90759 REMARK 350 BIOMT1 22 -1.000000 0.000000 0.000000 180.18020 REMARK 350 BIOMT2 22 0.000000 0.991445 0.130526 0.00000 REMARK 350 BIOMT3 22 0.000000 0.130526 -0.991445 0.00000 REMARK 350 BIOMT1 23 -0.500000 -0.255443 -0.827496 135.13515 REMARK 350 BIOMT2 23 0.255443 0.869498 -0.422756 -23.01290 REMARK 350 BIOMT3 23 0.827496 -0.422756 -0.369498 -74.54915 REMARK 350 BIOMT1 24 0.309017 -0.774583 -0.551842 62.25073 REMARK 350 BIOMT2 24 0.774583 0.541657 -0.326541 -69.78228 REMARK 350 BIOMT3 24 0.551842 -0.326541 0.767360 -49.71547 REMARK 350 BIOMT1 25 0.309017 -0.839986 0.446017 62.25073 REMARK 350 BIOMT2 25 0.839986 0.460987 0.286206 -75.67446 REMARK 350 BIOMT3 25 -0.446017 0.286206 0.848030 40.18174 REMARK 350 BIOMT1 26 0.000000 -0.997859 -0.065403 90.09010 REMARK 350 BIOMT2 26 -0.065403 0.065263 -0.995722 5.89217 REMARK 350 BIOMT3 26 0.997859 0.004278 -0.065263 -89.89721 REMARK 350 BIOMT1 27 -0.309017 -0.839986 0.446017 117.92947 REMARK 350 BIOMT2 27 0.774583 -0.494401 -0.394447 -69.78228 REMARK 350 BIOMT3 27 0.551842 0.223586 0.803418 -49.71547 REMARK 350 BIOMT1 28 -0.809017 -0.519140 0.275654 162.97452 REMARK 350 BIOMT2 28 0.519140 -0.411154 0.749297 -46.76939 REMARK 350 BIOMT3 28 -0.275654 0.749297 0.602137 24.83368 REMARK 350 BIOMT1 29 -0.809017 -0.478719 -0.341057 162.97452 REMARK 350 BIOMT2 29 -0.478719 0.199958 0.854895 43.12782 REMARK 350 BIOMT3 29 -0.341057 0.854895 -0.390941 30.72585 REMARK 350 BIOMT1 30 -0.309017 -0.774583 -0.551842 117.92947 REMARK 350 BIOMT2 30 -0.839986 0.494401 -0.223586 75.67446 REMARK 350 BIOMT3 30 0.446017 0.394447 -0.803418 -40.18174 REMARK 350 BIOMT1 31 0.809017 0.519140 -0.275654 17.20568 REMARK 350 BIOMT2 31 0.478719 -0.309834 0.821481 -43.12782 REMARK 350 BIOMT3 31 0.341057 -0.796553 -0.499183 -30.72585 REMARK 350 BIOMT1 32 0.809017 0.478719 0.341057 17.20568 REMARK 350 BIOMT2 32 -0.519140 0.309834 0.796553 46.76939 REMARK 350 BIOMT3 32 0.275654 -0.821481 0.499183 -24.83368 REMARK 350 BIOMT1 33 0.309017 0.774583 0.551842 62.25073 REMARK 350 BIOMT2 33 -0.774583 0.541657 -0.326541 69.78228 REMARK 350 BIOMT3 33 -0.551842 -0.326541 0.767360 49.71547 REMARK 350 BIOMT1 34 0.000000 0.997859 0.065403 90.09010 REMARK 350 BIOMT2 34 0.065403 0.065263 -0.995722 -5.89217 REMARK 350 BIOMT3 34 -0.997859 0.004278 -0.065263 89.89721 REMARK 350 BIOMT1 35 0.309017 0.839986 -0.446017 62.25073 REMARK 350 BIOMT2 35 0.839986 -0.460987 -0.286206 -75.67446 REMARK 350 BIOMT3 35 -0.446017 -0.286206 -0.848030 40.18174 REMARK 350 BIOMT1 36 -0.309017 0.839986 -0.446017 117.92947 REMARK 350 BIOMT2 36 -0.774583 -0.494401 -0.394447 69.78228 REMARK 350 BIOMT3 36 -0.551842 0.223586 0.803418 49.71547 REMARK 350 BIOMT1 37 0.500000 0.361268 -0.787074 45.04505 REMARK 350 BIOMT2 37 -0.255443 -0.806878 -0.532632 23.01290 REMARK 350 BIOMT3 37 -0.827496 0.467368 -0.311156 74.54915 REMARK 350 BIOMT1 38 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 38 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 39 0.500000 0.255443 0.827496 45.04505 REMARK 350 BIOMT2 39 -0.361268 -0.806878 0.467368 32.54663 REMARK 350 BIOMT3 39 0.787074 -0.532632 -0.311156 -70.90759 REMARK 350 BIOMT1 40 -0.309017 0.774583 0.551842 117.92947 REMARK 350 BIOMT2 40 -0.839986 -0.494401 0.223586 75.67446 REMARK 350 BIOMT3 40 0.446017 -0.394447 0.803418 -40.18174 REMARK 350 BIOMT1 41 -0.500000 0.361268 -0.787074 135.13515 REMARK 350 BIOMT2 41 -0.361268 0.738971 0.568689 32.54663 REMARK 350 BIOMT3 41 0.787074 0.568689 -0.238971 -70.90759 REMARK 350 BIOMT1 42 0.500000 -0.255443 -0.827496 45.04505 REMARK 350 BIOMT2 42 -0.361268 0.806878 -0.467368 32.54663 REMARK 350 BIOMT3 42 0.787074 0.532632 0.311156 -70.90759 REMARK 350 BIOMT1 43 0.809017 -0.519140 0.275654 17.20568 REMARK 350 BIOMT2 43 0.478719 0.309834 -0.821481 -43.12782 REMARK 350 BIOMT3 43 0.341057 0.796553 0.499183 -30.72585 REMARK 350 BIOMT1 44 0.000000 -0.065403 0.997859 90.09010 REMARK 350 BIOMT2 44 0.997859 -0.065263 -0.004278 -89.89721 REMARK 350 BIOMT3 44 0.065403 0.995722 0.065263 -5.89217 REMARK 350 BIOMT1 45 -0.809017 0.478719 0.341057 162.97452 REMARK 350 BIOMT2 45 0.478719 0.199958 0.854895 -43.12782 REMARK 350 BIOMT3 45 0.341057 0.854895 -0.390941 -30.72585 REMARK 350 BIOMT1 46 0.809017 0.478719 0.341057 17.20568 REMARK 350 BIOMT2 46 0.519140 -0.309834 -0.796553 -46.76939 REMARK 350 BIOMT3 46 -0.275654 0.821481 -0.499183 24.83368 REMARK 350 BIOMT1 47 0.309017 0.774583 0.551842 62.25073 REMARK 350 BIOMT2 47 0.774583 -0.541657 0.326541 -69.78228 REMARK 350 BIOMT3 47 0.551842 0.326541 -0.767360 -49.71547 REMARK 350 BIOMT1 48 0.000000 0.997859 0.065403 90.09010 REMARK 350 BIOMT2 48 -0.065403 -0.065263 0.995722 5.89217 REMARK 350 BIOMT3 48 0.997859 -0.004278 0.065263 -89.89721 REMARK 350 BIOMT1 49 0.309017 0.839986 -0.446017 62.25073 REMARK 350 BIOMT2 49 -0.839986 0.460987 0.286206 75.67446 REMARK 350 BIOMT3 49 0.446017 0.286206 0.848030 -40.18174 REMARK 350 BIOMT1 50 0.809017 0.519140 -0.275654 17.20568 REMARK 350 BIOMT2 50 -0.478719 0.309834 -0.821481 43.12782 REMARK 350 BIOMT3 50 -0.341057 0.796553 0.499183 30.72585 REMARK 350 BIOMT1 51 -0.309017 -0.774583 -0.551842 117.92947 REMARK 350 BIOMT2 51 0.839986 -0.494401 0.223586 -75.67446 REMARK 350 BIOMT3 51 -0.446017 -0.394447 0.803418 40.18174 REMARK 350 BIOMT1 52 0.000000 -0.997859 -0.065403 90.09010 REMARK 350 BIOMT2 52 0.065403 -0.065263 0.995722 -5.89217 REMARK 350 BIOMT3 52 -0.997859 -0.004278 0.065263 89.89721 REMARK 350 BIOMT1 53 -0.309017 -0.839986 0.446017 117.92947 REMARK 350 BIOMT2 53 -0.774583 0.494401 0.394447 69.78228 REMARK 350 BIOMT3 53 -0.551842 -0.223586 -0.803418 49.71547 REMARK 350 BIOMT1 54 -0.809017 -0.519140 0.275654 162.97452 REMARK 350 BIOMT2 54 -0.519140 0.411154 -0.749297 46.76939 REMARK 350 BIOMT3 54 0.275654 -0.749297 -0.602137 -24.83368 REMARK 350 BIOMT1 55 -0.809017 -0.478719 -0.341057 162.97452 REMARK 350 BIOMT2 55 0.478719 -0.199958 -0.854895 -43.12782 REMARK 350 BIOMT3 55 0.341057 -0.854895 0.390941 -30.72585 REMARK 350 BIOMT1 56 0.000000 -0.065403 0.997859 90.09010 REMARK 350 BIOMT2 56 -0.997859 0.065263 0.004278 89.89721 REMARK 350 BIOMT3 56 -0.065403 -0.995722 -0.065263 5.89217 REMARK 350 BIOMT1 57 -0.809017 0.478719 0.341057 162.97452 REMARK 350 BIOMT2 57 -0.478719 -0.199958 -0.854895 43.12782 REMARK 350 BIOMT3 57 -0.341057 -0.854895 0.390941 30.72585 REMARK 350 BIOMT1 58 -0.500000 0.361268 -0.787074 135.13515 REMARK 350 BIOMT2 58 0.361268 -0.738971 -0.568689 -32.54663 REMARK 350 BIOMT3 58 -0.787074 -0.568689 0.238971 70.90759 REMARK 350 BIOMT1 59 0.500000 -0.255443 -0.827496 45.04505 REMARK 350 BIOMT2 59 0.361268 -0.806878 0.467368 -32.54663 REMARK 350 BIOMT3 59 -0.787074 -0.532632 -0.311156 70.90759 REMARK 350 BIOMT1 60 0.809017 -0.519140 0.275654 17.20568 REMARK 350 BIOMT2 60 -0.478719 -0.309834 0.821481 43.12782 REMARK 350 BIOMT3 60 -0.341057 -0.796553 -0.499183 30.72585 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN 4 8 REMARK 465 VAL 4 9 REMARK 465 GLY 4 10 REMARK 465 THR 4 11 REMARK 465 HIS 4 12 REMARK 465 SER 4 13 REMARK 465 THR 4 14 REMARK 465 GLN 4 15 REMARK 465 ASN 4 16 REMARK 465 MET 4 17 REMARK 465 VAL 4 18 REMARK 465 SER 4 19 REMARK 465 ASN 4 20 REMARK 465 GLY 4 21 REMARK 465 SER 4 22 REMARK 465 PHE 4 45 REMARK 465 SER 4 46 REMARK 465 GLN 4 47 REMARK 465 ASP 4 48 REMARK 465 PRO 4 49 REMARK 465 SER 4 50 REMARK 465 LYS 4 51 REMARK 465 PHE 4 52 REMARK 465 THR 4 53 REMARK 465 ASP 4 54 REMARK 465 PRO 4 55 REMARK 465 VAL 4 56 REMARK 465 LYS 4 57 REMARK 465 ASP 4 58 REMARK 465 VAL 4 59 REMARK 465 LEU 4 60 REMARK 465 GLU 4 61 REMARK 465 LYS 4 62 REMARK 465 GLY 4 63 REMARK 465 ILE 4 64 REMARK 465 PRO 4 65 REMARK 465 THR 4 66 REMARK 465 LEU 4 67 REMARK 465 GLN 4 68 REMARK 465 SER 4 69 REMARK 465 PRO 4 70 REMARK 465 SER 4 71 REMARK 465 VAL 4 72 REMARK 465 GLU 4 73 REMARK 465 ALA 4 74 REMARK 465 CYS 4 75 REMARK 465 GLY 4 76 REMARK 465 TYR 4 77 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN 1 1 CG OD1 ND2 REMARK 470 GLU 1 4 CG CD OE1 OE2 REMARK 470 ARG 1 5 CG CD NE CZ NH1 NH2 REMARK 470 GLN 2 159 CG CD OE1 NE2 REMARK 470 VAL 2 160 CG1 CG2 REMARK 470 GLU 2 161 CG CD OE1 OE2 REMARK 470 ASN 2 162 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ASN 1 1 C PRO 1 2 N -0.145 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASN 1 1 N - CA - C ANGL. DEV. = -18.4 DEGREES REMARK 500 PRO 1 2 CA - N - CD ANGL. DEV. = 10.4 DEGREES REMARK 500 HIS 3 92 N - CA - C ANGL. DEV. = 25.3 DEGREES REMARK 500 PRO 3 93 C - N - CA ANGL. DEV. = -17.6 DEGREES REMARK 500 PRO 3 93 C - N - CD ANGL. DEV. = 13.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP 1 35 -159.42 -165.31 REMARK 500 HIS 1 78 147.99 -173.10 REMARK 500 ASN 1 212 49.13 -98.80 REMARK 500 CYS 1 247 82.45 48.67 REMARK 500 ASP 2 27 74.24 -152.56 REMARK 500 ASN 2 30 -161.55 64.27 REMARK 500 TYR 2 35 15.89 57.86 REMARK 500 THR 2 48 -38.77 -142.07 REMARK 500 ASP 2 57 -125.49 58.09 REMARK 500 CYS 2 112 110.98 -162.49 REMARK 500 ALA 2 114 -104.30 -135.63 REMARK 500 THR 2 158 -44.29 -132.91 REMARK 500 GLU 2 161 73.20 -28.33 REMARK 500 ASN 2 173 26.09 49.84 REMARK 500 PHE 2 174 14.60 56.16 REMARK 500 ASP 2 175 10.61 -145.87 REMARK 500 ARG 2 255 -156.89 -170.74 REMARK 500 TRP 3 27 -5.78 61.60 REMARK 500 LEU 3 127 145.66 -177.83 REMARK 500 PRO 3 180 93.70 -53.58 REMARK 500 THR 3 182 -73.18 -25.28 REMARK 500 TYR 3 183 -48.48 -29.39 REMARK 500 SER 3 184 54.74 -107.55 REMARK 500 THR 3 195 -99.62 -121.82 REMARK 500 MET 3 223 84.78 61.31 REMARK 500 PHE 4 27 96.14 -59.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: ION REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: PUTATIVE ZINC BINDING SITE ON ICOSAHEDRAL FIVE REMARK 800 -FOLD AXIS. ION LIGANDED BY FIVE SYMMETRY RELATED HISTIDINES REMARK 800 (HIS 1 134). EXTERIOR OF SITE SURROUNDED BY A WIDER CIRCLE OF REMARK 800 FIVE HISTIDINES (HIS 2 228) REMARK 800 REMARK 800 SITE_IDENTIFIER: RNA REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: RNA OBSERVED INTERACTING WITH THESE RESIDUES ON REMARK 800 THE INTERIOR SURFACE OF VIRAL PROTEIN CAPSID. NON-CONSERVATIVE REMARK 800 MUTATION OF TRP 2 38 GIVES NON-VIABLE VIRUS. REMARK 800 REMARK 800 SITE_IDENTIFIER: POC REMARK 800 EVIDENCE_CODE: AUTHOR REMARK 800 SITE_DESCRIPTION: AN ANTIVIRAL COMPOUND IS FOUND IN A POCKET OF REMARK 800 VP1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN 1 6000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE W11 1 7001 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AYN RELATED DB: PDB REMARK 900 CONTAINS THE STRUCTURE OF NATIVE HRV16 VIRUS REMARK 900 RELATED ID: 1AYM RELATED DB: PDB REMARK 900 CONTAINS THE HIGH RESOLUTION STRUCTURE OF NATIVE OPEN-POCKET HRV16 REMARK 900 VIRUS REMARK 900 RELATED ID: 1QJU RELATED DB: PDB REMARK 900 CONTAINS THE HIGH RESOLUTION STRUCTURE OF HRV16-WIN61209 COMPLEX REMARK 900 RELATED ID: 1QJX RELATED DB: PDB REMARK 900 CONTAINS THE HIGH RESOLUTION STRUCTURE OF HRV16-WIN68934 COMPLEX REMARK 900 RELATED ID: 1QJY RELATED DB: PDB REMARK 900 CONTAINS THE HIGH RESOLUTION STRUCTURE OF HRV16-WIN65099 COMPLEX DBREF 1C8M 1 1 285 UNP Q82122 POLG_HRV16 568 852 DBREF 1C8M 2 10 261 UNP Q82122 POLG_HRV16 78 329 DBREF 1C8M 3 1 238 UNP Q82122 POLG_HRV16 330 567 DBREF 1C8M 4 1 77 UNP Q82122 POLG_HRV16 1 77 SEQADV 1C8M ILE 4 24 UNP Q82122 LEU 25 CONFLICT SEQRES 1 1 285 ASN PRO VAL GLU ARG TYR VAL ASP GLU VAL LEU ASN GLU SEQRES 2 1 285 VAL LEU VAL VAL PRO ASN ILE ASN GLN SER HIS PRO THR SEQRES 3 1 285 THR SER ASN ALA ALA PRO VAL LEU ASP ALA ALA GLU THR SEQRES 4 1 285 GLY HIS THR ASN LYS ILE GLN PRO GLU ASP THR ILE GLU SEQRES 5 1 285 THR ARG TYR VAL GLN SER SER GLN THR LEU ASP GLU MET SEQRES 6 1 285 SER VAL GLU SER PHE LEU GLY ARG SER GLY CYS ILE HIS SEQRES 7 1 285 GLU SER VAL LEU ASP ILE VAL ASP ASN TYR ASN ASP GLN SEQRES 8 1 285 SER PHE THR LYS TRP ASN ILE ASN LEU GLN GLU MET ALA SEQRES 9 1 285 GLN ILE ARG ARG LYS PHE GLU MET PHE THR TYR ALA ARG SEQRES 10 1 285 PHE ASP SER GLU ILE THR MET VAL PRO SER VAL ALA ALA SEQRES 11 1 285 LYS ASP GLY HIS ILE GLY HIS ILE VAL MET GLN TYR MET SEQRES 12 1 285 TYR VAL PRO PRO GLY ALA PRO ILE PRO THR THR ARG ASP SEQRES 13 1 285 ASP TYR ALA TRP GLN SER GLY THR ASN ALA SER VAL PHE SEQRES 14 1 285 TRP GLN HIS GLY GLN PRO PHE PRO ARG PHE SER LEU PRO SEQRES 15 1 285 PHE LEU SER ILE ALA SER ALA TYR TYR MET PHE TYR ASP SEQRES 16 1 285 GLY TYR ASP GLY ASP THR TYR LYS SER ARG TYR GLY THR SEQRES 17 1 285 VAL VAL THR ASN ASP MET GLY THR LEU CYS SER ARG ILE SEQRES 18 1 285 VAL THR SER GLU GLN LEU HIS LYS VAL LYS VAL VAL THR SEQRES 19 1 285 ARG ILE TYR HIS LYS ALA LYS HIS THR LYS ALA TRP CYS SEQRES 20 1 285 PRO ARG PRO PRO ARG ALA VAL GLN TYR SER HIS THR HIS SEQRES 21 1 285 THR THR ASN TYR LYS LEU SER SER GLU VAL HIS ASN ASP SEQRES 22 1 285 VAL ALA ILE ARG PRO ARG THR ASN LEU THR THR VAL SEQRES 1 2 252 SER ASP ARG ILE ILE GLN ILE THR ARG GLY ASP SER THR SEQRES 2 2 252 ILE THR SER GLN ASP VAL ALA ASN ALA VAL VAL GLY TYR SEQRES 3 2 252 GLY VAL TRP PRO HIS TYR LEU THR PRO GLN ASP ALA THR SEQRES 4 2 252 ALA ILE ASP LYS PRO THR GLN PRO ASP THR SER SER ASN SEQRES 5 2 252 ARG PHE TYR THR LEU ASP SER LYS MET TRP ASN SER THR SEQRES 6 2 252 SER LYS GLY TRP TRP TRP LYS LEU PRO ASP ALA LEU LYS SEQRES 7 2 252 ASP MET GLY ILE PHE GLY GLU ASN MET PHE TYR HIS PHE SEQRES 8 2 252 LEU GLY ARG SER GLY TYR THR VAL HIS VAL GLN CYS ASN SEQRES 9 2 252 ALA SER LYS PHE HIS GLN GLY THR LEU LEU VAL VAL MET SEQRES 10 2 252 ILE PRO GLU HIS GLN LEU ALA THR VAL ASN LYS GLY ASN SEQRES 11 2 252 VAL ASN ALA GLY TYR LYS TYR THR HIS PRO GLY GLU ALA SEQRES 12 2 252 GLY ARG GLU VAL GLY THR GLN VAL GLU ASN GLU LYS GLN SEQRES 13 2 252 PRO SER ASP ASP ASN TRP LEU ASN PHE ASP GLY THR LEU SEQRES 14 2 252 LEU GLY ASN LEU LEU ILE PHE PRO HIS GLN PHE ILE ASN SEQRES 15 2 252 LEU ARG SER ASN ASN SER ALA THR LEU ILE VAL PRO TYR SEQRES 16 2 252 VAL ASN ALA VAL PRO MET ASP SER MET VAL ARG HIS ASN SEQRES 17 2 252 ASN TRP SER LEU VAL ILE ILE PRO VAL CYS GLN LEU GLN SEQRES 18 2 252 SER ASN ASN ILE SER ASN ILE VAL PRO ILE THR VAL SER SEQRES 19 2 252 ILE SER PRO MET CYS ALA GLU PHE SER GLY ALA ARG ALA SEQRES 20 2 252 LYS THR VAL VAL GLN SEQRES 1 3 238 GLY LEU PRO VAL TYR VAL THR PRO GLY SER GLY GLN PHE SEQRES 2 3 238 MET THR THR ASP ASP MET GLN SER PRO CYS ALA LEU PRO SEQRES 3 3 238 TRP TYR HIS PRO THR LYS GLU ILE PHE ILE PRO GLY GLU SEQRES 4 3 238 VAL LYS ASN LEU ILE GLU MET CYS GLN VAL ASP THR LEU SEQRES 5 3 238 ILE PRO ILE ASN SER THR GLN SER ASN ILE GLY ASN VAL SEQRES 6 3 238 SER MET TYR THR VAL THR LEU SER PRO GLN THR LYS LEU SEQRES 7 3 238 ALA GLU GLU ILE PHE ALA ILE LYS VAL ASP ILE ALA SER SEQRES 8 3 238 HIS PRO LEU ALA THR THR LEU ILE GLY GLU ILE ALA SER SEQRES 9 3 238 TYR PHE THR HIS TRP THR GLY SER LEU ARG PHE SER PHE SEQRES 10 3 238 MET PHE CYS GLY THR ALA ASN THR THR LEU LYS VAL LEU SEQRES 11 3 238 LEU ALA TYR THR PRO PRO GLY ILE GLY LYS PRO ARG SER SEQRES 12 3 238 ARG LYS GLU ALA MET LEU GLY THR HIS VAL VAL TRP ASP SEQRES 13 3 238 VAL GLY LEU GLN SER THR VAL SER LEU VAL VAL PRO TRP SEQRES 14 3 238 ILE SER ALA SER GLN TYR ARG PHE THR THR PRO ASP THR SEQRES 15 3 238 TYR SER SER ALA GLY TYR ILE THR CYS TRP TYR GLN THR SEQRES 16 3 238 ASN PHE VAL VAL PRO PRO ASN THR PRO ASN THR ALA GLU SEQRES 17 3 238 MET LEU CYS PHE VAL SER GLY CYS LYS ASP PHE CYS LEU SEQRES 18 3 238 ARG MET ALA ARG ASP THR ASP LEU HIS LYS GLN THR GLY SEQRES 19 3 238 PRO ILE THR GLN SEQRES 1 4 77 GLY ALA GLN VAL SER ARG GLN ASN VAL GLY THR HIS SER SEQRES 2 4 77 THR GLN ASN MET VAL SER ASN GLY SER SER ILE ASN TYR SEQRES 3 4 77 PHE ASN ILE ASN TYR PHE LYS ASP ALA ALA SER SER GLY SEQRES 4 4 77 ALA SER ARG LEU ASP PHE SER GLN ASP PRO SER LYS PHE SEQRES 5 4 77 THR ASP PRO VAL LYS ASP VAL LEU GLU LYS GLY ILE PRO SEQRES 6 4 77 THR LEU GLN SER PRO SER VAL GLU ALA CYS GLY TYR HET ZN 16000 1 HET W11 17001 27 HETNAM ZN ZINC ION HETNAM W11 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]- HETNAM 2 W11 PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE HETSYN W11 WIN63843 FORMUL 5 ZN ZN 2+ FORMUL 6 W11 C18 H18 F3 N3 O3 FORMUL 7 HOH *482(H2 O) HELIX 1 1Y ASN 1 1 ASN 1 12 1 12 HELIX 2 1Z SER 1 66 GLY 1 72 1 7 HELIX 3 1AO ILE 1 98 GLN 1 101 1 4 HELIX 4 1A ALA 1 104 PHE 1 110 1 7 HELIX 5 1B TYR 1 158 SER 1 162 1 5 HELIX 6 2Z PRO 2 56 SER 2 59 1 4 HELIX 7 2A GLY 2 90 TYR 2 98 1 9 HELIX 8 2B LEU 2 179 ILE 2 184 1 6 HELIX 9 3Z ILE 3 44 CYS 3 47 1 4 HELIX 10 3A LEU 3 98 ALA 3 103 1 6 HELIX 11 3B SER 3 143 MET 3 148 1 6 SHEET 1 B11 4 GLY 1 75 ASP 1 83 0 SHEET 2 B11 4 VAL 1 230 PRO 1 248 -1 SHEET 3 B11 4 MET 1 112 ALA 1 130 -1 SHEET 4 B11 4 PRO 1 177 MET 1 192 -1 SHEET 1 B12 4 PHE 1 93 ASN 1 97 0 SHEET 2 B12 4 THR 1 216 ILE 1 221 -1 SHEET 3 B12 4 HIS 1 137 VAL 1 145 -1 SHEET 4 B12 4 ASN 1 165 GLN 1 171 -1 SHEET 1 B21 2 ILE 2 14 ARG 2 18 0 SHEET 2 B21 2 SER 2 21 SER 2 25 -1 SHEET 1 B22 4 LYS 2 69 TRP 2 71 0 SHEET 2 B22 4 VAL 2 238 ALA 2 254 -1 SHEET 3 B22 4 HIS 2 99 GLN 2 111 -1 SHEET 4 B22 4 ASN 2 196 VAL 2 202 -1 SHEET 1 B23 4 TRP 2 78 LEU 2 82 0 SHEET 2 B23 4 TRP 2 219 GLN 2 230 -1 SHEET 3 B23 4 GLN 2 119 PRO 2 128 -1 SHEET 4 B23 4 HIS 2 187 ASN 2 191 -1 SHEET 1 B31 1 LEU 3 2 VAL 3 6 0 SHEET 1 B32 4 THR 3 69 LEU 3 72 0 SHEET 2 B32 4 ALA 3 207 ALA 3 224 -1 SHEET 3 B32 4 PHE 3 106 PHE 3 119 -1 SHEET 4 B32 4 THR 3 162 VAL 3 167 -1 SHEET 1 B33 4 LEU 3 78 VAL 3 87 0 SHEET 2 B33 4 TYR 3 188 TYR 3 193 -1 SHEET 3 B33 4 LYS 3 128 THR 3 134 -1 SHEET 4 B33 4 THR 3 151 ASP 3 156 -1 SHEET 1 B41 2 ALA 4 2 ARG 4 6 0 SHEET 2 B41 2 SER 4 23 ASN 4 30 -1 LINK NE2 HIS 1 134 ZN ZN 16000 1555 1555 2.81 CISPEP 1 LEU 2 82 PRO 2 83 0 -6.02 SITE 1 ION 3 HIS 1 134 HIS 1 228 ZN 16000 SITE 1 RNA 2 TRP 2 38 PHE 3 35 SITE 1 POC 4 PHE 1 179 MET 1 214 LEU 1 217 W11 17001 SITE 1 AC1 1 HIS 1 134 SITE 1 AC2 17 ILE 1 77 ILE 1 98 LEU 1 100 MET 1 124 SITE 2 AC2 17 TYR 1 142 MET 1 143 TYR 1 144 ALA 1 166 SITE 3 AC2 17 VAL 1 168 PHE 1 179 LEU 1 181 LEU 1 184 SITE 4 AC2 17 TYR 1 190 ASN 1 212 MET 1 214 LEU 1 217 SITE 5 AC2 17 HOH 15378 CRYST1 360.300 343.330 332.630 90.00 90.00 90.00 P 2 21 21 120 ORIGX1 1.000000 0.000000 0.000000 -90.09010 ORIGX2 0.000000 0.065403 -0.997859 0.00000 ORIGX3 0.000000 0.997859 0.065403 0.00000 SCALE1 0.002775 0.000000 0.000000 0.00000 SCALE2 0.000000 0.002913 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003006 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.500000 0.255443 0.827496 45.04505 MTRIX2 2 0.361268 0.806878 -0.467368 -32.54663 MTRIX3 2 -0.787074 0.532632 0.311156 70.90759 MTRIX1 3 -0.309017 0.774583 0.551842 117.92947 MTRIX2 3 0.839986 0.494401 -0.223586 -75.67446 MTRIX3 3 -0.446017 0.394447 -0.803418 40.18174 MTRIX1 4 -0.309017 0.839986 -0.446017 117.92947 MTRIX2 4 0.774583 0.494401 0.394447 -69.78228 MTRIX3 4 0.551842 -0.223586 -0.803418 -49.71547 MTRIX1 5 0.500000 0.361268 -0.787074 45.04505 MTRIX2 5 0.255443 0.806878 0.532632 -23.01290 MTRIX3 5 0.827496 -0.467368 0.311156 -74.54915 MTRIX1 6 -0.809017 0.519140 -0.275654 162.97452 MTRIX2 6 0.519140 0.411154 -0.749297 -46.76939 MTRIX3 6 -0.275654 -0.749297 -0.602137 24.83368 MTRIX1 7 0.000000 0.065403 -0.997859 90.09010 MTRIX2 7 0.997859 0.065263 0.004278 -89.89721 MTRIX3 7 0.065403 -0.995722 -0.065263 -5.89217 MTRIX1 8 0.809017 -0.478719 -0.341057 17.20568 MTRIX2 8 0.519140 0.309834 0.796553 -46.76939 MTRIX3 8 -0.275654 -0.821481 0.499183 24.83368 MTRIX1 9 0.500000 -0.361268 0.787074 45.04505 MTRIX2 9 -0.255443 0.806878 0.532632 23.01290 MTRIX3 9 -0.827495 -0.467368 0.311156 74.54915 MTRIX1 10 -0.500000 0.255443 0.827496 135.13515 MTRIX2 10 -0.255443 0.869498 -0.422756 23.01290 MTRIX3 10 -0.827495 -0.422756 -0.369498 74.54915 MTRIX1 11 0.309017 -0.774583 -0.551842 62.25073 MTRIX2 11 -0.774583 -0.541657 0.326541 69.78228 MTRIX3 11 -0.551842 0.326541 -0.767360 49.71547 MTRIX1 12 0.309017 -0.839986 0.446017 62.25073 MTRIX2 12 -0.839986 -0.460987 -0.286206 75.67446 MTRIX3 12 0.446017 -0.286206 -0.848030 -40.18174 MTRIX1 13 -0.500000 -0.361268 0.787074 135.13515 MTRIX2 13 -0.361268 -0.738971 -0.568689 32.54663 MTRIX3 13 0.787074 -0.568689 0.238971 -70.90759 MTRIX1 14 -1.000000 0.000000 0.000000 180.18020 MTRIX2 14 0.000000 -0.991445 -0.130526 0.00000 MTRIX3 14 0.000000 -0.130526 0.991445 0.00000 MTRIX1 15 -0.500000 -0.255443 -0.827495 135.13515 MTRIX2 15 -0.255443 -0.869498 0.422756 23.01290 MTRIX3 15 -0.827495 0.422756 0.369498 74.54915 MTRIX1 16 0.000000 -0.997859 -0.065403 90.09010 MTRIX2 16 -0.065403 0.065263 -0.995722 5.89217 MTRIX3 16 0.997859 0.004278 -0.065263 -89.89721 MTRIX1 17 -0.309017 -0.839986 0.446017 117.92947 MTRIX2 17 0.774583 -0.494401 -0.394447 -69.78228 MTRIX3 17 0.551842 0.223586 0.803418 -49.71547 MTRIX1 18 -0.809017 -0.519140 0.275654 162.97452 MTRIX2 18 0.519140 -0.411154 0.749297 -46.76939 MTRIX3 18 -0.275654 0.749297 0.602137 24.83368 MTRIX1 19 -0.809017 -0.478719 -0.341057 162.97452 MTRIX2 19 -0.478719 0.199958 0.854895 43.12782 MTRIX3 19 -0.341057 0.854895 -0.390941 30.72585 MTRIX1 20 -0.309017 -0.774583 -0.551842 117.92947 MTRIX2 20 -0.839986 0.494401 -0.223586 75.67446 MTRIX3 20 0.446017 0.394447 -0.803418 -40.18174 MTRIX1 21 0.809017 0.519140 -0.275654 17.20568 MTRIX2 21 0.478719 -0.309834 0.821481 -43.12782 MTRIX3 21 0.341057 -0.796553 -0.499183 -30.72585 MTRIX1 22 0.809017 0.478719 0.341057 17.20568 MTRIX2 22 -0.519140 0.309834 0.796553 46.76939 MTRIX3 22 0.275654 -0.821481 0.499183 -24.83368 MTRIX1 23 0.309017 0.774583 0.551842 62.25073 MTRIX2 23 -0.774583 0.541657 -0.326541 69.78228 MTRIX3 23 -0.551842 -0.326541 0.767360 49.71547 MTRIX1 24 0.000000 0.997859 0.065403 90.09010 MTRIX2 24 0.065403 0.065263 -0.995722 -5.89217 MTRIX3 24 -0.997859 0.004278 -0.065263 89.89721 MTRIX1 25 0.309017 0.839986 -0.446017 62.25073 MTRIX2 25 0.839986 -0.460987 -0.286206 -75.67446 MTRIX3 25 -0.446017 -0.286206 -0.848030 40.18174 MTRIX1 26 -0.500000 0.361268 -0.787074 135.13515 MTRIX2 26 -0.361268 0.738971 0.568689 32.54663 MTRIX3 26 0.787074 0.568689 -0.238971 -70.90759 MTRIX1 27 0.500000 -0.255443 -0.827495 45.04505 MTRIX2 27 -0.361268 0.806878 -0.467368 32.54663 MTRIX3 27 0.787074 0.532632 0.311156 -70.90759 MTRIX1 28 0.809017 -0.519140 0.275654 17.20568 MTRIX2 28 0.478719 0.309834 -0.821481 -43.12782 MTRIX3 28 0.341057 0.796553 0.499183 -30.72585 MTRIX1 29 0.000000 -0.065403 0.997859 90.09010 MTRIX2 29 0.997859 -0.065263 -0.004278 -89.89721 MTRIX3 29 0.065403 0.995722 0.065263 -5.89217 MTRIX1 30 -0.809017 0.478719 0.341057 162.97452 MTRIX2 30 0.478719 0.199958 0.854895 -43.12782 MTRIX3 30 0.341057 0.854895 -0.390941 -30.72585